RNA–Protein interactions for RNA: ENST00000597618.5

TRIM28-210, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-210ENST00000597618 KCTD5Q9NXV2 234 aa10.12□□□□□ -0.79
TRIM28-210ENST00000597618 SUFUQ9UMX1 484 aa10.12□□□□□ -0.79
TRIM28-210ENST00000597618 POLHQ9Y253 713 aa10.12□□□□□ -0.79
TRIM28-210ENST00000597618 RPS6KL1Q9Y6S9 549 aa10.12□□□□□ -0.79
TRIM28-210ENST00000597618 FBN2P35556 2912 aa10.12□□□□□ -0.79
TRIM28-210ENST00000597618 A1L4Q6 167 aa10.11□□□□□ -0.79
TRIM28-210ENST00000597618 POLR1CO15160 346 aaPredicted RBP10.11□□□□□ -0.79
TRIM28-210ENST00000597618 IVLP07476 585 aa10.11□□□□□ -0.79
TRIM28-210ENST00000597618 ADCY8P40145 1251 aa10.11□□□□□ -0.79
TRIM28-210ENST00000597618 ACTR1BP42025 376 aa10.11□□□□□ -0.79
TRIM28-210ENST00000597618 FASLGP48023 281 aa10.11□□□□□ -0.79
TRIM28-210ENST00000597618 PMS2P54278 862 aa10.11□□□□□ -0.79
TRIM28-210ENST00000597618 ACTR1AP61163 376 aa10.11□□□□□ -0.79
TRIM28-210ENST00000597618 NOMO3P69849 1222 aa10.11□□□□□ -0.79
TRIM28-210ENST00000597618 CDK3Q00526 305 aa10.11□□□□□ -0.79
TRIM28-210ENST00000597618 BCL2L1Q07817 233 aa10.11□□□□□ -0.79
TRIM28-210ENST00000597618 SNAP47Q5SQN1 464 aa10.11□□□□□ -0.79
TRIM28-210ENST00000597618 TAF3Q5VWG9 929 aa10.11□□□□□ -0.79
TRIM28-210ENST00000597618 NAA35Q5VZE5 725 aa10.11□□□□□ -0.79
TRIM28-210ENST00000597618 ARHGAP22Q7Z5H3 698 aa10.11□□□□□ -0.79
TRIM28-210ENST00000597618 SRLQ86TD4 932 aa10.11□□□□□ -0.79
TRIM28-210ENST00000597618 CREBRFQ8IUR6 639 aa10.11□□□□□ -0.79
TRIM28-210ENST00000597618 ELOA2Q8IYF1 753 aaPredicted RBP10.11□□□□□ -0.79
TRIM28-210ENST00000597618 UMODL1-AS1Q8N2C9 162 aa10.11□□□□□ -0.79
TRIM28-210ENST00000597618 FAM172AQ8WUF8 416 aa10.11□□□□□ -0.79
TRIM28-210ENST00000597618 CPA5Q8WXQ8 436 aa10.11□□□□□ -0.79
TRIM28-210ENST00000597618 COQ10AQ96MF6 247 aa10.11□□□□□ -0.79
TRIM28-210ENST00000597618 SLC38A3Q99624 504 aa10.11□□□□□ -0.79
TRIM28-210ENST00000597618 MAGEB5Q9BZ81 275 aa10.11□□□□□ -0.79
TRIM28-210ENST00000597618 CATSPERBQ9H7T0 1116 aa10.11□□□□□ -0.79
TRIM28-210ENST00000597618 PDFQ9HBH1 243 aa10.11□□□□□ -0.79
TRIM28-210ENST00000597618 SLC17A4Q9Y2C5 497 aa10.11□□□□□ -0.79
TRIM28-210ENST00000597618 MRPS18BQ9Y676 258 aaKnown RBP10.11□□□□□ -0.79
TRIM28-210ENST00000597618 C2CD3Q4AC94 2353 aa10.11□□□□□ -0.79
TRIM28-210ENST00000597618 C2CD4BA6NLJ0 364 aa10.1□□□□□ -0.79
TRIM28-210ENST00000597618 A8MU76 341 aa10.1□□□□□ -0.79
TRIM28-210ENST00000597618 WASH4PA8MWX3 477 aa10.1□□□□□ -0.79
TRIM28-210ENST00000597618 INPP4BO15327 924 aa10.1□□□□□ -0.79
TRIM28-210ENST00000597618 FGF10O15520 208 aaPredicted RBP10.1□□□□□ -0.79
TRIM28-210ENST00000597618 PRAMEF11O60813 436 aa10.1□□□□□ -0.79
TRIM28-210ENST00000597618 SEMA7AO75326 666 aa10.1□□□□□ -0.79
TRIM28-210ENST00000597618 FUCA1P04066 466 aa10.1□□□□□ -0.79
TRIM28-210ENST00000597618 RNF224P0DH78 156 aa10.1□□□□□ -0.79
TRIM28-210ENST00000597618 TEAD1P28347 426 aa10.1□□□□□ -0.79
TRIM28-210ENST00000597618 DLSTP36957 453 aa10.1□□□□□ -0.79
TRIM28-210ENST00000597618 HDAC4P56524 1084 aa10.1□□□□□ -0.79
TRIM28-210ENST00000597618 ZNF787Q6DD87 383 aa10.1□□□□□ -0.79
TRIM28-210ENST00000597618 SLFN11Q7Z7L1 901 aa10.1□□□□□ -0.79
TRIM28-210ENST00000597618 PHLDB2Q86SQ0 1253 aa10.1□□□□□ -0.79
TRIM28-210ENST00000597618 ZNF761Q86XN6 746 aaPredicted RBP10.1□□□□□ -0.79
TRIM28-210ENST00000597618 FAM114A1Q8IWE2 563 aa10.1□□□□□ -0.79
TRIM28-210ENST00000597618 GPT2Q8TD30 523 aa10.1□□□□□ -0.79
TRIM28-210ENST00000597618 CENPIQ92674 756 aaPredicted RBP10.1□□□□□ -0.79
TRIM28-210ENST00000597618 OR2M4Q96R27 311 aa10.1□□□□□ -0.79
TRIM28-210ENST00000597618 ULBP3Q9BZM4 244 aa10.1□□□□□ -0.79
TRIM28-210ENST00000597618 APMAPQ9HDC9 416 aa10.1□□□□□ -0.79
TRIM28-210ENST00000597618 DONSONQ9NYP3 566 aa10.1□□□□□ -0.79
TRIM28-210ENST00000597618 B4GALT6Q9UBX8 382 aa10.1□□□□□ -0.79
TRIM28-210ENST00000597618 CROTQ9UKG9 612 aa10.1□□□□□ -0.79
TRIM28-210ENST00000597618 TLK1Q9UKI8 766 aa10.1□□□□□ -0.79
TRIM28-210ENST00000597618 ST14Q9Y5Y6 855 aa10.1□□□□□ -0.79
TRIM28-210ENST00000597618 GOLGA6CA6NDK9 693 aa10.09□□□□□ -0.79
TRIM28-210ENST00000597618 GOLGA6BA6NDN3 693 aa10.09□□□□□ -0.79
TRIM28-210ENST00000597618 A8MX80 341 aa10.09□□□□□ -0.79
TRIM28-210ENST00000597618 J3KR12 359 aa10.09□□□□□ -0.79
TRIM28-210ENST00000597618 BIN1O00499 593 aa10.09□□□□□ -0.79
TRIM28-210ENST00000597618 TRAFD1O14545 582 aaPredicted RBP10.09□□□□□ -0.79
TRIM28-210ENST00000597618 CREB3O43889 395 aa10.09□□□□□ -0.79
TRIM28-210ENST00000597618 PALMO75781 387 aa10.09□□□□□ -0.79
TRIM28-210ENST00000597618 GOLGA6DP0CG33 693 aa10.09□□□□□ -0.79
TRIM28-210ENST00000597618 MMP8P22894 467 aa10.09□□□□□ -0.79
TRIM28-210ENST00000597618 F8A1P23610 371 aa10.09□□□□□ -0.79
TRIM28-210ENST00000597618 NFKBIAP25963 317 aa10.09□□□□□ -0.79
TRIM28-210ENST00000597618 DCTP40126 519 aa10.09□□□□□ -0.79
TRIM28-210ENST00000597618 RGRP47804 291 aa10.09□□□□□ -0.79
TRIM28-210ENST00000597618 AP1S1P61966 158 aa10.09□□□□□ -0.79
TRIM28-210ENST00000597618 LRP8Q14114 963 aa10.09□□□□□ -0.79
TRIM28-210ENST00000597618 ERV3-1Q14264 604 aa10.09□□□□□ -0.79
TRIM28-210ENST00000597618 CNGA3Q16281 694 aa10.09□□□□□ -0.79
TRIM28-210ENST00000597618 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.09□□□□□ -0.79
TRIM28-210ENST00000597618 RAET1GQ6H3X3 334 aa10.09□□□□□ -0.79
TRIM28-210ENST00000597618 C6orf15Q6UXA7 325 aaPredicted RBP10.09□□□□□ -0.79
TRIM28-210ENST00000597618 MAMDC2Q7Z304 686 aaPredicted RBP10.09□□□□□ -0.79
TRIM28-210ENST00000597618 NOP9Q86U38 636 aaKnown RBP10.09□□□□□ -0.79
TRIM28-210ENST00000597618 TICAM1Q8IUC6 712 aa10.09□□□□□ -0.79
TRIM28-210ENST00000597618 PYROXD2Q8N2H3 581 aa10.09□□□□□ -0.79
TRIM28-210ENST00000597618 SFRP1Q8N474 314 aa10.09□□□□□ -0.79
TRIM28-210ENST00000597618 TSEN2Q8NCE0 465 aaKnown RBP10.09□□□□□ -0.79
TRIM28-210ENST00000597618 SLC37A2Q8TED4 501 aa10.09□□□□□ -0.79
TRIM28-210ENST00000597618 PTCD2Q8WV60 388 aaKnown RBP10.09□□□□□ -0.79
TRIM28-210ENST00000597618 SPOCK2Q92563 424 aa10.09□□□□□ -0.79
TRIM28-210ENST00000597618 DTD2Q96FN9 168 aa10.09□□□□□ -0.79
TRIM28-210ENST00000597618 SCARF2Q96GP6 870 aaPredicted RBP10.09□□□□□ -0.79
TRIM28-210ENST00000597618 CINPQ9BW66 212 aaPredicted RBP10.09□□□□□ -0.79
TRIM28-210ENST00000597618 STN1Q9H668 368 aaKnown RBP10.09□□□□□ -0.79
TRIM28-210ENST00000597618 LRRC19Q9H756 370 aa10.09□□□□□ -0.79
TRIM28-210ENST00000597618 GOLGA6AQ9NYA3 693 aa10.09□□□□□ -0.79
TRIM28-210ENST00000597618 KCND3Q9UK17 655 aa10.09□□□□□ -0.79
TRIM28-210ENST00000597618 OAS3Q9Y6K5 1087 aaKnown RBP10.09□□□□□ -0.79
TRIM28-210ENST00000597618 CACNA1DQ01668 2161 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms