RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 IL21RQ9HBE5 538 aa19.65■□□□□ 0.74
SHKBP1-214ENST00000597396 ZFYVE1Q9HBF4 777 aa19.65■□□□□ 0.74
SHKBP1-214ENST00000597396 DNAAF2Q9NVR5 837 aaKnown RBP19.65■□□□□ 0.74
SHKBP1-214ENST00000597396 PKD2L2Q9NZM6 624 aa19.65■□□□□ 0.74
SHKBP1-214ENST00000597396 SHOC2Q9UQ13 582 aa19.65■□□□□ 0.74
SHKBP1-214ENST00000597396 FNDC3AQ9Y2H6 1198 aaKnown RBP19.65■□□□□ 0.74
SHKBP1-214ENST00000597396 ZNF711Q9Y462 761 aa19.65■□□□□ 0.74
SHKBP1-214ENST00000597396 GOLGA6L10A0A0M3HER8 536 aa19.64■□□□□ 0.73
SHKBP1-214ENST00000597396 PSMD3O43242 534 aa19.64■□□□□ 0.73
SHKBP1-214ENST00000597396 ETS1P14921 441 aa19.64■□□□□ 0.73
SHKBP1-214ENST00000597396 FDFT1P37268 417 aa19.64■□□□□ 0.73
SHKBP1-214ENST00000597396 CCT8P50990 548 aa19.64■□□□□ 0.73
SHKBP1-214ENST00000597396 PTK2BQ14289 1009 aa19.64■□□□□ 0.73
SHKBP1-214ENST00000597396 INPP5AQ14642 412 aa19.64■□□□□ 0.73
SHKBP1-214ENST00000597396 PAPD7Q5XG87 772 aaKnown RBP19.64■□□□□ 0.73
SHKBP1-214ENST00000597396 ESRP1Q6NXG1 681 aaKnown RBP19.64■□□□□ 0.73
SHKBP1-214ENST00000597396 TECPR1Q7Z6L1 1165 aa19.64■□□□□ 0.73
SHKBP1-214ENST00000597396 SLC22A18ASQ8N1D0 253 aa19.64■□□□□ 0.73
SHKBP1-214ENST00000597396 PLA2G15Q8NCC3 412 aa19.64■□□□□ 0.73
SHKBP1-214ENST00000597396 MAGOHBQ96A72 148 aaKnown RBP19.64■□□□□ 0.73
SHKBP1-214ENST00000597396 TBL1YQ9BQ87 522 aa19.64■□□□□ 0.73
SHKBP1-214ENST00000597396 APOL2Q9BQE5 337 aa19.64■□□□□ 0.73
SHKBP1-214ENST00000597396 TM7SF3Q9NS93 570 aa19.64■□□□□ 0.73
SHKBP1-214ENST00000597396 PAK5Q9P286 719 aa19.64■□□□□ 0.73
SHKBP1-214ENST00000597396 CD84Q9UIB8 345 aa19.64■□□□□ 0.73
SHKBP1-214ENST00000597396 SAR1BQ9Y6B6 198 aa19.64■□□□□ 0.73
SHKBP1-214ENST00000597396 LRP4O75096 1905 aa19.64■□□□□ 0.73
SHKBP1-214ENST00000597396 A0A1B0GTQ1 180 aa19.63■□□□□ 0.73
SHKBP1-214ENST00000597396 ADRA1AP35348 466 aa19.63■□□□□ 0.73
SHKBP1-214ENST00000597396 LMAN1P49257 510 aa19.63■□□□□ 0.73
SHKBP1-214ENST00000597396 ARRB1P49407 418 aaPredicted RBP19.63■□□□□ 0.73
SHKBP1-214ENST00000597396 SPARCL1Q14515 664 aa19.63■□□□□ 0.73
SHKBP1-214ENST00000597396 CDKN3Q16667 212 aa19.63■□□□□ 0.73
SHKBP1-214ENST00000597396 RAET1GQ6H3X3 334 aa19.63■□□□□ 0.73
SHKBP1-214ENST00000597396 PNCKQ6P2M8 343 aa19.63■□□□□ 0.73
SHKBP1-214ENST00000597396 RFLNAQ6ZTI6 216 aa19.63■□□□□ 0.73
SHKBP1-214ENST00000597396 PRUNE1Q86TP1 453 aa19.63■□□□□ 0.73
SHKBP1-214ENST00000597396 RAVER1Q8IY67 606 aaKnown RBP19.63■□□□□ 0.73
SHKBP1-214ENST00000597396 NRSN1Q8IZ57 195 aa19.63■□□□□ 0.73
SHKBP1-214ENST00000597396 BLOC1S5Q8TDH9 187 aa19.63■□□□□ 0.73
SHKBP1-214ENST00000597396 AP2M1Q96CW1 435 aa19.63■□□□□ 0.73
SHKBP1-214ENST00000597396 CAPZA3Q96KX2 299 aa19.63■□□□□ 0.73
SHKBP1-214ENST00000597396 APOOQ9BUR5 198 aa19.63■□□□□ 0.73
SHKBP1-214ENST00000597396 ABCG8Q9H221 673 aa19.63■□□□□ 0.73
SHKBP1-214ENST00000597396 LRRC40Q9H9A6 602 aa19.63■□□□□ 0.73
SHKBP1-214ENST00000597396 GPR27Q9NS67 375 aa19.63■□□□□ 0.73
SHKBP1-214ENST00000597396 HACD3Q9P035 362 aa19.63■□□□□ 0.73
SHKBP1-214ENST00000597396 SPO11Q9Y5K1 396 aa19.63■□□□□ 0.73
SHKBP1-214ENST00000597396 SPTY2D1-AS1A0A0U1RR47 76 aa19.62■□□□□ 0.73
SHKBP1-214ENST00000597396 E7EVH7 732 aa19.62■□□□□ 0.73
SHKBP1-214ENST00000597396 YKT6O15498 198 aa19.62■□□□□ 0.73
SHKBP1-214ENST00000597396 USP12O75317 370 aa19.62■□□□□ 0.73
SHKBP1-214ENST00000597396 ZNF883P0CG24 379 aa19.62■□□□□ 0.73
SHKBP1-214ENST00000597396 TSHRP16473 764 aa19.62■□□□□ 0.73
SHKBP1-214ENST00000597396 GPR1P46091 355 aa19.62■□□□□ 0.73
SHKBP1-214ENST00000597396 SPINT3P49223 89 aa19.62■□□□□ 0.73
SHKBP1-214ENST00000597396 IL9RQ01113 521 aa19.62■□□□□ 0.73
SHKBP1-214ENST00000597396 OLIG2Q13516 323 aa19.62■□□□□ 0.73
SHKBP1-214ENST00000597396 RANBP10Q6VN20 620 aa19.62■□□□□ 0.73
SHKBP1-214ENST00000597396 ZNF765Q7L2R6 523 aa19.62■□□□□ 0.73
SHKBP1-214ENST00000597396 KLHDC8BQ8IXV7 354 aa19.62■□□□□ 0.73
SHKBP1-214ENST00000597396 PDCD7Q8N8D1 485 aaKnown RBP19.62■□□□□ 0.73
SHKBP1-214ENST00000597396 ATL2Q8NHH9 583 aa19.62■□□□□ 0.73
SHKBP1-214ENST00000597396 TRABDQ9H4I3 376 aa19.62■□□□□ 0.73
SHKBP1-214ENST00000597396 WDR26Q9H7D7 661 aa19.62■□□□□ 0.73
SHKBP1-214ENST00000597396 RAB6BQ9NRW1 208 aa19.62■□□□□ 0.73
SHKBP1-214ENST00000597396 OR1A2Q9Y585 309 aa19.62■□□□□ 0.73
SHKBP1-214ENST00000597396 K7ESM1 405 aa19.61■□□□□ 0.73
SHKBP1-214ENST00000597396 CACNB4O00305 520 aaPredicted RBP19.61■□□□□ 0.73
SHKBP1-214ENST00000597396 PHF2O75151 1096 aa19.61■□□□□ 0.73
SHKBP1-214ENST00000597396 ZSCAN5DPP0CG00 497 aa19.61■□□□□ 0.73
SHKBP1-214ENST00000597396 HTR1BP28222 390 aa19.61■□□□□ 0.73
SHKBP1-214ENST00000597396 CASQ1P31415 396 aa19.61■□□□□ 0.73
SHKBP1-214ENST00000597396 RPL22P35268 128 aaKnown RBP19.61■□□□□ 0.73
SHKBP1-214ENST00000597396 ETF1P62495 437 aaKnown RBP19.61■□□□□ 0.73
SHKBP1-214ENST00000597396 DPTQ07507 201 aa19.61■□□□□ 0.73
SHKBP1-214ENST00000597396 SLC14A1Q13336 389 aa19.61■□□□□ 0.73
SHKBP1-214ENST00000597396 FZD2Q14332 565 aa19.61■□□□□ 0.73
SHKBP1-214ENST00000597396 NFATC4Q14934 902 aa19.61■□□□□ 0.73
SHKBP1-214ENST00000597396 SUZ12Q15022 739 aaKnown RBP19.61■□□□□ 0.73
SHKBP1-214ENST00000597396 CYP1B1Q16678 543 aa19.61■□□□□ 0.73
SHKBP1-214ENST00000597396 PPM1JQ5JR12 505 aa19.61■□□□□ 0.73
SHKBP1-214ENST00000597396 TPRG1LQ5T0D9 272 aa19.61■□□□□ 0.73
SHKBP1-214ENST00000597396 KCTD11Q693B1 232 aa19.61■□□□□ 0.73
SHKBP1-214ENST00000597396 C4orf22Q6V702 233 aa19.61■□□□□ 0.73
SHKBP1-214ENST00000597396 MACC1Q6ZN28 852 aa19.61■□□□□ 0.73
SHKBP1-214ENST00000597396 GLT6D1Q7Z4J2 308 aa19.61■□□□□ 0.73
SHKBP1-214ENST00000597396 TMC3Q7Z5M5 1100 aa19.61■□□□□ 0.73
SHKBP1-214ENST00000597396 PARGQ86W56 976 aa19.61■□□□□ 0.73
SHKBP1-214ENST00000597396 GLIS1Q8NBF1 620 aa19.61■□□□□ 0.73
SHKBP1-214ENST00000597396 SCAMP4Q969E2 229 aa19.61■□□□□ 0.73
SHKBP1-214ENST00000597396 ETNK1Q9HBU6 452 aa19.61■□□□□ 0.73
SHKBP1-214ENST00000597396 PHPT1Q9NRX4 125 aaPredicted RBP19.61■□□□□ 0.73
SHKBP1-214ENST00000597396 RAD18Q9NS91 495 aa19.61■□□□□ 0.73
SHKBP1-214ENST00000597396 DNAJC28Q9NX36 388 aa19.61■□□□□ 0.73
SHKBP1-214ENST00000597396 RGSL1A5PLK6 1076 aa19.6■□□□□ 0.73
SHKBP1-214ENST00000597396 ERI2A8K979 691 aaKnown RBP19.6■□□□□ 0.73
SHKBP1-214ENST00000597396 AP2A1O95782 977 aa19.6■□□□□ 0.73
SHKBP1-214ENST00000597396 PYGLP06737 847 aa19.6■□□□□ 0.73
SHKBP1-214ENST00000597396 KCNA4P22459 653 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms