RNA–Protein interactions for RNA: ENST00000596378.1

SRRM1-222, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 1 (best)

Gene SRRM1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-222ENST00000596378 SMIM24O75264 130 aa22.67■■□□□ 1.22
SRRM1-222ENST00000596378 RHOCP08134 193 aa22.67■■□□□ 1.22
SRRM1-222ENST00000596378 CCL23P55773 120 aa22.67■■□□□ 1.22
SRRM1-222ENST00000596378 HERVK_113P63132 956 aa22.67■■□□□ 1.22
SRRM1-222ENST00000596378 PFKFB4Q16877 469 aa22.67■■□□□ 1.22
SRRM1-222ENST00000596378 AGKQ53H12 422 aa22.67■■□□□ 1.22
SRRM1-222ENST00000596378 HECTD3Q5T447 861 aa22.67■■□□□ 1.22
SRRM1-222ENST00000596378 GLT6D1Q7Z4J2 308 aa22.67■■□□□ 1.22
SRRM1-222ENST00000596378 OR9I1Q8NGQ6 314 aa22.67■■□□□ 1.22
SRRM1-222ENST00000596378 AARSD1Q9BTE6 412 aaKnown RBP22.67■■□□□ 1.22
SRRM1-222ENST00000596378 ERVK-6Q9BXR3 956 aa22.67■■□□□ 1.22
SRRM1-222ENST00000596378 KLHL4Q9C0H6 718 aa22.67■■□□□ 1.22
SRRM1-222ENST00000596378 RNF38Q9H0F5 515 aa22.67■■□□□ 1.22
SRRM1-222ENST00000596378 IKZF3Q9UKT9 509 aa22.67■■□□□ 1.22
SRRM1-222ENST00000596378 KDELR3O43731 214 aa22.66■■□□□ 1.22
SRRM1-222ENST00000596378 PQBP1O60828 265 aaKnown RBP22.66■■□□□ 1.22
SRRM1-222ENST00000596378 STC2O76061 302 aa22.66■■□□□ 1.22
SRRM1-222ENST00000596378 PRLP01236 227 aa22.66■■□□□ 1.22
SRRM1-222ENST00000596378 SH3BP2P78314 561 aa22.66■■□□□ 1.22
SRRM1-222ENST00000596378 FASTKQ14296 549 aaKnown RBP22.66■■□□□ 1.22
SRRM1-222ENST00000596378 SLC8B1Q6J4K2 584 aa22.66■■□□□ 1.22
SRRM1-222ENST00000596378 LINGO4Q6UY18 593 aa22.66■■□□□ 1.22
SRRM1-222ENST00000596378 LPCAT1Q8NF37 534 aa22.66■■□□□ 1.22
SRRM1-222ENST00000596378 BHLHE22Q8NFJ8 381 aaPredicted RBP22.66■■□□□ 1.22
SRRM1-222ENST00000596378 PEX13Q92968 403 aa22.66■■□□□ 1.22
SRRM1-222ENST00000596378 TMEM175Q9BSA9 504 aa22.66■■□□□ 1.22
SRRM1-222ENST00000596378 MRPL9Q9BYD2 267 aaKnown RBP22.66■■□□□ 1.22
SRRM1-222ENST00000596378 NLE1Q9NVX2 485 aaPredicted RBP22.66■■□□□ 1.22
SRRM1-222ENST00000596378 GIMAP2Q9UG22 337 aa22.66■■□□□ 1.22
SRRM1-222ENST00000596378 ANKRD36A6QL64 1941 aa22.66■■□□□ 1.22
SRRM1-222ENST00000596378 C2orf78A6NCI8 922 aa22.66■■□□□ 1.22
SRRM1-222ENST00000596378 HSPA1AP0DMV8 641 aaKnown RBP22.66■■□□□ 1.22
SRRM1-222ENST00000596378 HSPA1BP0DMV9 641 aaKnown RBP22.66■■□□□ 1.22
SRRM1-222ENST00000596378 MTHFD2P13995 350 aa22.66■■□□□ 1.22
SRRM1-222ENST00000596378 HMGA1P17096 107 aaKnown RBP22.66■■□□□ 1.22
SRRM1-222ENST00000596378 CYTH1Q15438 398 aa22.66■■□□□ 1.22
SRRM1-222ENST00000596378 SCUBE2Q9NQ36 999 aa22.66■■□□□ 1.22
SRRM1-222ENST00000596378 MTRRQ9UBK8 725 aa22.66■■□□□ 1.22
SRRM1-222ENST00000596378 SCOCQ9UIL1 159 aa22.66■■□□□ 1.22
SRRM1-222ENST00000596378 MED16Q9Y2X0 877 aa22.66■■□□□ 1.22
SRRM1-222ENST00000596378 PSMD12O00232 456 aaPredicted RBP22.65■■□□□ 1.22
SRRM1-222ENST00000596378 FBP2O00757 339 aa22.65■■□□□ 1.22
SRRM1-222ENST00000596378 GPC4O75487 556 aa22.65■■□□□ 1.22
SRRM1-222ENST00000596378 ZCCHC18P0CG32 403 aa22.65■■□□□ 1.22
SRRM1-222ENST00000596378 CR2P20023 1033 aa22.65■■□□□ 1.22
SRRM1-222ENST00000596378 OGNP20774 298 aaKnown RBP22.65■■□□□ 1.22
SRRM1-222ENST00000596378 SUOXP51687 545 aa22.65■■□□□ 1.22
SRRM1-222ENST00000596378 INHBCP55103 352 aa22.65■■□□□ 1.22
SRRM1-222ENST00000596378 FOXA1P55317 472 aa22.65■■□□□ 1.22
SRRM1-222ENST00000596378 GALNT1Q10472 559 aaPredicted RBP22.65■■□□□ 1.22
SRRM1-222ENST00000596378 LAMB3Q13751 1172 aa22.65■■□□□ 1.22
SRRM1-222ENST00000596378 BTG3Q14201 252 aaPredicted RBP22.65■■□□□ 1.22
SRRM1-222ENST00000596378 SQLEQ14534 574 aa22.65■■□□□ 1.22
SRRM1-222ENST00000596378 TYSND1Q2T9J0 566 aa22.65■■□□□ 1.22
SRRM1-222ENST00000596378 SETMARQ53H47 684 aaPredicted RBP22.65■■□□□ 1.22
SRRM1-222ENST00000596378 PAQR3Q6TCH7 311 aa22.65■■□□□ 1.22
SRRM1-222ENST00000596378 TDRD1Q9BXT4 1180 aaKnown RBP22.65■■□□□ 1.22
SRRM1-222ENST00000596378 GALPQ9UBC7 116 aa22.65■■□□□ 1.22
SRRM1-222ENST00000596378 VPS28Q9UK41 221 aa22.65■■□□□ 1.22
SRRM1-222ENST00000596378 AGO1Q9UL18 857 aaKnown RBP22.65■■□□□ 1.22
SRRM1-222ENST00000596378 SUFUQ9UMX1 484 aa22.65■■□□□ 1.22
SRRM1-222ENST00000596378 RHOBTB1O94844 696 aa22.65■■□□□ 1.22
SRRM1-222ENST00000596378 CRTAMO95727 393 aa22.65■■□□□ 1.22
SRRM1-222ENST00000596378 ME2P23368 584 aa22.65■■□□□ 1.22
SRRM1-222ENST00000596378 NFKB2Q00653 900 aa22.65■■□□□ 1.22
SRRM1-222ENST00000596378 DEFB128Q7Z7B8 93 aa22.65■■□□□ 1.22
SRRM1-222ENST00000596378 PHC3Q8NDX5 983 aa22.65■■□□□ 1.22
SRRM1-222ENST00000596378 KCNA7Q96RP8 456 aa22.65■■□□□ 1.22
SRRM1-222ENST00000596378 CDK5RAP1Q96SZ6 601 aaKnown RBP22.65■■□□□ 1.22
SRRM1-222ENST00000596378 MRPL1Q9BYD6 325 aaKnown RBP22.65■■□□□ 1.22
SRRM1-222ENST00000596378 ADA2Q9NZK5 511 aa22.65■■□□□ 1.22
SRRM1-222ENST00000596378 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP22.64■■□□□ 1.22
SRRM1-222ENST00000596378 RNASEH1O60930 286 aaKnown RBP22.64■■□□□ 1.22
SRRM1-222ENST00000596378 CLDN11O75508 207 aa22.64■■□□□ 1.22
SRRM1-222ENST00000596378 ZNF177Q13360 481 aaPredicted RBP22.64■■□□□ 1.22
SRRM1-222ENST00000596378 PLD1Q13393 1074 aa22.64■■□□□ 1.22
SRRM1-222ENST00000596378 PTK2BQ14289 1009 aa22.64■■□□□ 1.22
SRRM1-222ENST00000596378 GRAMD1BQ3KR37 738 aa22.64■■□□□ 1.22
SRRM1-222ENST00000596378 UGT3A2Q3SY77 523 aa22.64■■□□□ 1.22
SRRM1-222ENST00000596378 RNF219Q5W0B1 726 aaPredicted RBP22.64■■□□□ 1.22
SRRM1-222ENST00000596378 OR52E8Q6IFG1 317 aa22.64■■□□□ 1.22
SRRM1-222ENST00000596378 LRRC43Q8N309 656 aa22.64■■□□□ 1.22
SRRM1-222ENST00000596378 C19orf60Q96EN9 201 aa22.64■■□□□ 1.22
SRRM1-222ENST00000596378 ATOH8Q96SQ7 321 aa22.64■■□□□ 1.22
SRRM1-222ENST00000596378 TRMOQ9BU70 441 aa22.64■■□□□ 1.22
SRRM1-222ENST00000596378 BPIFA1Q9NP55 256 aa22.64■■□□□ 1.22
SRRM1-222ENST00000596378 SMPD4Q9NXE4 827 aa22.64■■□□□ 1.22
SRRM1-222ENST00000596378 PCDHGA7Q9Y5G6 932 aa22.64■■□□□ 1.22
SRRM1-222ENST00000596378 MAGEA13PA6NCF6 341 aa22.64■■□□□ 1.21
SRRM1-222ENST00000596378 SNAP91O60641 907 aa22.64■■□□□ 1.21
SRRM1-222ENST00000596378 CDK14O94921 469 aa22.64■■□□□ 1.21
SRRM1-222ENST00000596378 ALDH7A1P49419 539 aaKnown RBP22.64■■□□□ 1.21
SRRM1-222ENST00000596378 USP41Q3LFD5 358 aa22.64■■□□□ 1.21
SRRM1-222ENST00000596378 MMEL1Q495T6 779 aa22.64■■□□□ 1.21
SRRM1-222ENST00000596378 REP15Q6BDI9 236 aa22.64■■□□□ 1.21
SRRM1-222ENST00000596378 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.64■■□□□ 1.219e-11■■■□□ 16.3
SRRM1-222ENST00000596378 LARP4Q71RC2 724 aaKnown RBP eCLIP22.64■■□□□ 1.21
SRRM1-222ENST00000596378 EFHBQ8N7U6 833 aa22.64■■□□□ 1.21
SRRM1-222ENST00000596378 LPGAT1Q92604 370 aa22.64■■□□□ 1.21
SRRM1-222ENST00000596378 PPP2R3CQ969Q6 453 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms