RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 OR1E3Q8WZA6 343 aa13.04□□□□□ -0.32
USE1-207ENST00000596136 PDXPQ96GD0 296 aa13.04□□□□□ -0.32
USE1-207ENST00000596136 RBM41Q96IZ5 413 aaKnown RBP13.04□□□□□ -0.32
USE1-207ENST00000596136 TEKT5Q96M29 485 aa13.04□□□□□ -0.32
USE1-207ENST00000596136 TRIB3Q96RU7 358 aa13.04□□□□□ -0.32
USE1-207ENST00000596136 SLC25A51Q9H1U9 297 aa13.04□□□□□ -0.32
USE1-207ENST00000596136 ABCG8Q9H221 673 aa13.04□□□□□ -0.32
USE1-207ENST00000596136 WDR26Q9H7D7 661 aa13.04□□□□□ -0.32
USE1-207ENST00000596136 FGF22Q9HCT0 170 aa13.04□□□□□ -0.32
USE1-207ENST00000596136 SAE1Q9UBE0 346 aaPredicted RBP13.04□□□□□ -0.32
USE1-207ENST00000596136 KLQ9UEF7 1012 aa13.04□□□□□ -0.32
USE1-207ENST00000596136 ZMIZ1Q9ULJ6 1067 aa13.04□□□□□ -0.32
USE1-207ENST00000596136 TTLL3Q9Y4R7 772 aa13.04□□□□□ -0.32
USE1-207ENST00000596136 ARHGEF17Q96PE2 2063 aaPredicted RBP13.04□□□□□ -0.32
USE1-207ENST00000596136 LAMA5O15230 3695 aa13.03□□□□□ -0.32
USE1-207ENST00000596136 A0A0U1RQS6 177 aa13.03□□□□□ -0.32
USE1-207ENST00000596136 FAM149AA5PLN7 773 aa13.03□□□□□ -0.32
USE1-207ENST00000596136 TRABD2BA6NFA1 517 aa13.03□□□□□ -0.32
USE1-207ENST00000596136 OPA1O60313 960 aa13.03□□□□□ -0.32
USE1-207ENST00000596136 SOD1P00441 154 aa13.03□□□□□ -0.32
USE1-207ENST00000596136 TNFP01375 233 aa13.03□□□□□ -0.32
USE1-207ENST00000596136 ANXA6P08133 673 aa13.03□□□□□ -0.32
USE1-207ENST00000596136 MYCLP1P12525 358 aaPredicted RBP13.03□□□□□ -0.32
USE1-207ENST00000596136 MYF5P13349 255 aa13.03□□□□□ -0.32
USE1-207ENST00000596136 JUPP14923 745 aa13.03□□□□□ -0.32
USE1-207ENST00000596136 PECAM1P16284 738 aaPredicted RBP13.03□□□□□ -0.32
USE1-207ENST00000596136 PTPN3P26045 913 aa13.03□□□□□ -0.32
USE1-207ENST00000596136 CTNNA2P26232 953 aa13.03□□□□□ -0.32
USE1-207ENST00000596136 PTPN7P35236 360 aa13.03□□□□□ -0.32
USE1-207ENST00000596136 EPHB1P54762 984 aa13.03□□□□□ -0.32
USE1-207ENST00000596136 QPCTQ16769 361 aa13.03□□□□□ -0.32
USE1-207ENST00000596136 HES3Q5TGS1 186 aa13.03□□□□□ -0.32
USE1-207ENST00000596136 RFLNAQ6ZTI6 216 aa13.03□□□□□ -0.32
USE1-207ENST00000596136 BBS12Q6ZW61 710 aa13.03□□□□□ -0.32
USE1-207ENST00000596136 NT5DC3Q86UY8 548 aa13.03□□□□□ -0.32
USE1-207ENST00000596136 SLC35F3Q8IY50 421 aa13.03□□□□□ -0.32
USE1-207ENST00000596136 NRSN1Q8IZ57 195 aa13.03□□□□□ -0.32
USE1-207ENST00000596136 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.03□□□□□ -0.32
USE1-207ENST00000596136 ACRBPQ8NEB7 543 aa13.03□□□□□ -0.32
USE1-207ENST00000596136 KIAA1524Q8TCG1 905 aa13.03□□□□□ -0.32
USE1-207ENST00000596136 TFB1MQ8WVM0 346 aaKnown RBP13.03□□□□□ -0.32
USE1-207ENST00000596136 ZCCHC14Q8WYQ9 949 aaKnown RBP13.03□□□□□ -0.32
USE1-207ENST00000596136 P3H4Q92791 437 aa13.03□□□□□ -0.32
USE1-207ENST00000596136 GLMNQ92990 594 aa13.03□□□□□ -0.32
USE1-207ENST00000596136 AGAP3Q96P47 875 aa13.03□□□□□ -0.32
USE1-207ENST00000596136 FRMD8Q9BZ67 464 aaPredicted RBP13.03□□□□□ -0.32
USE1-207ENST00000596136 GLOD4Q9HC38 313 aa13.03□□□□□ -0.32
USE1-207ENST00000596136 PHPT1Q9NRX4 125 aaPredicted RBP13.03□□□□□ -0.32
USE1-207ENST00000596136 PKD1L2Q7Z442 2459 aa13.03□□□□□ -0.32
USE1-207ENST00000596136 DSPP15924 2871 aaKnown RBP13.03□□□□□ -0.32
USE1-207ENST00000596136 CCDC66A2RUB6 948 aa13.02□□□□□ -0.33
USE1-207ENST00000596136 RGSL1A5PLK6 1076 aa13.02□□□□□ -0.33
USE1-207ENST00000596136 HACD1B0YJ81 288 aa13.02□□□□□ -0.33
USE1-207ENST00000596136 TAF4O00268 1085 aa13.02□□□□□ -0.33
USE1-207ENST00000596136 MTSS1O43312 755 aa13.02□□□□□ -0.33
USE1-207ENST00000596136 CLDN7O95471 211 aa13.02□□□□□ -0.33
USE1-207ENST00000596136 FUCA1P04066 466 aa13.02□□□□□ -0.33
USE1-207ENST00000596136 CEACAM5P06731 702 aa13.02□□□□□ -0.33
USE1-207ENST00000596136 PYGLP06737 847 aa13.02□□□□□ -0.33
USE1-207ENST00000596136 CELA2BP08218 269 aaPredicted RBP13.02□□□□□ -0.33
USE1-207ENST00000596136 CTSEP14091 401 aa13.02□□□□□ -0.33
USE1-207ENST00000596136 RPIAP49247 311 aa13.02□□□□□ -0.33
USE1-207ENST00000596136 CLDN6P56747 220 aa13.02□□□□□ -0.33
USE1-207ENST00000596136 CDK3Q00526 305 aa13.02□□□□□ -0.33
USE1-207ENST00000596136 WASHC5Q12768 1159 aa13.02□□□□□ -0.33
USE1-207ENST00000596136 TARDBPQ13148 414 aaKnown RBP eCLIP13.02□□□□□ -0.33
USE1-207ENST00000596136 XRCC4Q13426 336 aa13.02□□□□□ -0.33
USE1-207ENST00000596136 NR0B2Q15466 257 aa13.02□□□□□ -0.33
USE1-207ENST00000596136 KAZNQ674X7 775 aa13.02□□□□□ -0.33
USE1-207ENST00000596136 DENND2CQ68D51 928 aa13.02□□□□□ -0.33
USE1-207ENST00000596136 OGFOD3Q6PK18 319 aa13.02□□□□□ -0.33
USE1-207ENST00000596136 ADAMTSL4Q6UY14 1074 aa13.02□□□□□ -0.33
USE1-207ENST00000596136 RD3Q7Z3Z2 195 aa13.02□□□□□ -0.33
USE1-207ENST00000596136 HEATR4Q86WZ0 1026 aa13.02□□□□□ -0.33
USE1-207ENST00000596136 PROSER1Q86XN7 944 aa13.02□□□□□ -0.33
USE1-207ENST00000596136 GKN2Q86XP6 184 aa13.02□□□□□ -0.33
USE1-207ENST00000596136 LPCAT1Q8NF37 534 aa13.02□□□□□ -0.33
USE1-207ENST00000596136 IFI44Q8TCB0 444 aa13.02□□□□□ -0.33
USE1-207ENST00000596136 SCG3Q8WXD2 468 aaKnown RBP13.02□□□□□ -0.33
USE1-207ENST00000596136 AP2M1Q96CW1 435 aa13.02□□□□□ -0.33
USE1-207ENST00000596136 SCARF2Q96GP6 870 aaPredicted RBP13.02□□□□□ -0.33
USE1-207ENST00000596136 WDR24Q96S15 920 aa13.02□□□□□ -0.33
USE1-207ENST00000596136 VAT1Q99536 393 aa13.02□□□□□ -0.33
USE1-207ENST00000596136 MLPHQ9BV36 600 aaPredicted RBP13.02□□□□□ -0.33
USE1-207ENST00000596136 ADGRE3Q9BY15 652 aa13.02□□□□□ -0.33
USE1-207ENST00000596136 CEP41Q9BYV8 373 aa13.02□□□□□ -0.33
USE1-207ENST00000596136 NRSN2Q9GZP1 204 aa13.02□□□□□ -0.33
USE1-207ENST00000596136 CCDC86Q9H6F5 360 aaKnown RBP13.02□□□□□ -0.33
USE1-207ENST00000596136 CLCA2Q9UQC9 943 aa13.02□□□□□ -0.33
USE1-207ENST00000596136 SLC17A4Q9Y2C5 497 aa13.02□□□□□ -0.33
USE1-207ENST00000596136 URB1O60287 2271 aaKnown RBP13.02□□□□□ -0.33
USE1-207ENST00000596136 COL27A1Q8IZC6 1860 aaPredicted RBP13.02□□□□□ -0.33
USE1-207ENST00000596136 CFAP47Q6ZTR5 3102 aa13.01□□□□□ -0.33
USE1-207ENST00000596136 PRSS38A1L453 326 aa13.01□□□□□ -0.33
USE1-207ENST00000596136 GRID2IPA4D2P6 1211 aa13.01□□□□□ -0.33
USE1-207ENST00000596136 APOC4-APOC2K7ER74 178 aa13.01□□□□□ -0.33
USE1-207ENST00000596136 MT-CO3P00414 261 aa13.01□□□□□ -0.33
USE1-207ENST00000596136 APOC2P02655 101 aa13.01□□□□□ -0.33
USE1-207ENST00000596136 CD68P34810 354 aaPredicted RBP13.01□□□□□ -0.33
USE1-207ENST00000596136 RTP5Q14D33 572 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms