RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 SOD2P04179 222 aa17.09■□□□□ 0.33
SHKBP1-205ENST00000594973 SERPINE1P05121 402 aa17.09■□□□□ 0.33
SHKBP1-205ENST00000594973 PRDX6P30041 224 aa17.09■□□□□ 0.33
SHKBP1-205ENST00000594973 GLRBP48167 497 aa17.09■□□□□ 0.33
SHKBP1-205ENST00000594973 C16orf72Q14CZ0 275 aa17.09■□□□□ 0.33
SHKBP1-205ENST00000594973 TGFBIQ15582 683 aa17.09■□□□□ 0.33
SHKBP1-205ENST00000594973 ATG14Q6ZNE5 492 aa17.09■□□□□ 0.33
SHKBP1-205ENST00000594973 CLEC14AQ86T13 490 aa17.09■□□□□ 0.33
SHKBP1-205ENST00000594973 WDR75Q8IWA0 830 aaKnown RBP17.09■□□□□ 0.33
SHKBP1-205ENST00000594973 CCDC117Q8IWD4 279 aaPredicted RBP17.09■□□□□ 0.33
SHKBP1-205ENST00000594973 CNTN4Q8IWV2 1026 aa17.09■□□□□ 0.33
SHKBP1-205ENST00000594973 POU5F2Q8N7G0 328 aa17.09■□□□□ 0.33
SHKBP1-205ENST00000594973 PDZD8Q8NEN9 1154 aa17.09■□□□□ 0.33
SHKBP1-205ENST00000594973 FATE1Q969F0 183 aa17.09■□□□□ 0.33
SHKBP1-205ENST00000594973 TOX2Q96NM4 488 aa17.09■□□□□ 0.33
SHKBP1-205ENST00000594973 PHF12Q96QT6 1004 aa17.09■□□□□ 0.33
SHKBP1-205ENST00000594973 RNF38Q9H0F5 515 aa17.09■□□□□ 0.33
SHKBP1-205ENST00000594973 FAM96AQ9H5X1 160 aa17.09■□□□□ 0.33
SHKBP1-205ENST00000594973 NMRAL1Q9HBL8 299 aa17.09■□□□□ 0.33
SHKBP1-205ENST00000594973 MRM3Q9HC36 420 aaKnown RBP17.09■□□□□ 0.33
SHKBP1-205ENST00000594973 TRPV5Q9NQA5 729 aa17.09■□□□□ 0.33
SHKBP1-205ENST00000594973 PCDHGB4Q9UN71 923 aa17.09■□□□□ 0.33
SHKBP1-205ENST00000594973 PCDHGB5Q9Y5G0 923 aa17.09■□□□□ 0.33
SHKBP1-205ENST00000594973 MICAL3Q7RTP6 2002 aa17.08■□□□□ 0.33
SHKBP1-205ENST00000594973 HEATR9A2RTY3 570 aa17.08■□□□□ 0.33
SHKBP1-205ENST00000594973 C2orf78A6NCI8 922 aa17.08■□□□□ 0.33
SHKBP1-205ENST00000594973 AURKAO14965 403 aa17.08■□□□□ 0.33
SHKBP1-205ENST00000594973 PRAMEF11O60813 436 aa17.08■□□□□ 0.33
SHKBP1-205ENST00000594973 KLKB1P03952 638 aa17.08■□□□□ 0.33
SHKBP1-205ENST00000594973 CORO1AP31146 461 aaKnown RBP17.08■□□□□ 0.33
SHKBP1-205ENST00000594973 ARRB2P32121 409 aa17.08■□□□□ 0.33
SHKBP1-205ENST00000594973 ENTPD1P49961 510 aa17.08■□□□□ 0.33
SHKBP1-205ENST00000594973 YBEYP58557 167 aaPredicted RBP17.08■□□□□ 0.33
SHKBP1-205ENST00000594973 DEFB103AP81534 67 aa17.08■□□□□ 0.33
SHKBP1-205ENST00000594973 ADGRE1Q14246 886 aa17.08■□□□□ 0.33
SHKBP1-205ENST00000594973 UGP2Q16851 508 aa17.08■□□□□ 0.33
SHKBP1-205ENST00000594973 SIRPB2Q5JXA9 342 aa17.08■□□□□ 0.33
SHKBP1-205ENST00000594973 NEPROQ6NW34 567 aa17.08■□□□□ 0.33
SHKBP1-205ENST00000594973 MFSD6LQ8IWD5 586 aa17.08■□□□□ 0.33
SHKBP1-205ENST00000594973 SPATA6LQ8N4H0 392 aa17.08■□□□□ 0.33
SHKBP1-205ENST00000594973 TTC16Q8NEE8 873 aa17.08■□□□□ 0.33
SHKBP1-205ENST00000594973 TSPAN14Q8NG11 270 aa17.08■□□□□ 0.33
SHKBP1-205ENST00000594973 CCDC124Q96CT7 223 aaKnown RBP17.08■□□□□ 0.33
SHKBP1-205ENST00000594973 SGF29Q96ES7 293 aa17.08■□□□□ 0.33
SHKBP1-205ENST00000594973 EBF4Q9BQW3 602 aa17.08■□□□□ 0.33
SHKBP1-205ENST00000594973 BEGAINQ9BUH8 593 aa17.08■□□□□ 0.33
SHKBP1-205ENST00000594973 UNKQ9C0B0 810 aaKnown RBP17.08■□□□□ 0.33
SHKBP1-205ENST00000594973 POLR1EQ9GZS1 481 aaKnown RBP17.08■□□□□ 0.33
SHKBP1-205ENST00000594973 ARNT2Q9HBZ2 717 aa17.08■□□□□ 0.33
SHKBP1-205ENST00000594973 ATP13A1Q9HD20 1204 aa17.08■□□□□ 0.33
SHKBP1-205ENST00000594973 TRPM5Q9NZQ8 1165 aa17.08■□□□□ 0.33
SHKBP1-205ENST00000594973 TBX21Q9UL17 535 aa17.08■□□□□ 0.33
SHKBP1-205ENST00000594973 COQ6Q9Y2Z9 468 aa17.08■□□□□ 0.33
SHKBP1-205ENST00000594973 FAM32AQ9Y421 112 aaKnown RBP17.08■□□□□ 0.33
SHKBP1-205ENST00000594973 YIPF1Q9Y548 306 aa17.08■□□□□ 0.33
SHKBP1-205ENST00000594973 MYLKQ15746 1914 aa17.08■□□□□ 0.32
SHKBP1-205ENST00000594973 FUOMA2VDF0 154 aa17.08■□□□□ 0.32
SHKBP1-205ENST00000594973 ZNF701M0R085 212 aaPredicted RBP17.08■□□□□ 0.32
SHKBP1-205ENST00000594973 TSPAN3O60637 253 aa17.08■□□□□ 0.32
SHKBP1-205ENST00000594973 SGSHP51688 502 aa17.08■□□□□ 0.32
SHKBP1-205ENST00000594973 KIAA0930Q6ICG6 404 aaPredicted RBP17.08■□□□□ 0.32
SHKBP1-205ENST00000594973 ELMSAN1Q6PJG2 1045 aa17.08■□□□□ 0.32
SHKBP1-205ENST00000594973 HPS6Q86YV9 775 aa17.08■□□□□ 0.32
SHKBP1-205ENST00000594973 CEP97Q8IW35 865 aa17.08■□□□□ 0.32
SHKBP1-205ENST00000594973 SCAIQ8N9R8 606 aa17.08■□□□□ 0.32
SHKBP1-205ENST00000594973 PIWIL2Q8TC59 973 aaKnown RBP17.08■□□□□ 0.32
SHKBP1-205ENST00000594973 TOP1MTQ969P6 601 aa17.08■□□□□ 0.32
SHKBP1-205ENST00000594973 NUF2Q9BZD4 464 aa17.08■□□□□ 0.32
SHKBP1-205ENST00000594973 PRKD2Q9BZL6 878 aa17.08■□□□□ 0.32
SHKBP1-205ENST00000594973 ACSS2Q9NR19 701 aa17.08■□□□□ 0.32
SHKBP1-205ENST00000594973 SMPD4Q9NXE4 827 aa17.08■□□□□ 0.32
SHKBP1-205ENST00000594973 CNOT11Q9UKZ1 510 aaKnown RBP17.08■□□□□ 0.32
SHKBP1-205ENST00000594973 APOBEC2Q9Y235 224 aaKnown RBP17.08■□□□□ 0.32
SHKBP1-205ENST00000594973 FAM95CA0A1B0GW59 222 aa17.07■□□□□ 0.32
SHKBP1-205ENST00000594973 G3V2L1 256 aa17.07■□□□□ 0.32
SHKBP1-205ENST00000594973 TK2O00142 265 aa17.07■□□□□ 0.32
SHKBP1-205ENST00000594973 PRRG1O14668 218 aa17.07■□□□□ 0.32
SHKBP1-205ENST00000594973 ABLIM3O94929 683 aa17.07■□□□□ 0.32
SHKBP1-205ENST00000594973 SLC35E2BP0CK96 405 aa17.07■□□□□ 0.32
SHKBP1-205ENST00000594973 COL6A2P12110 1019 aa17.07■□□□□ 0.32
SHKBP1-205ENST00000594973 ITGAXP20702 1163 aa17.07■□□□□ 0.32
SHKBP1-205ENST00000594973 GLDCP23378 1020 aa17.07■□□□□ 0.32
SHKBP1-205ENST00000594973 STT3AP46977 705 aa17.07■□□□□ 0.32
SHKBP1-205ENST00000594973 TUBA4AP68366 448 aa17.07■□□□□ 0.32
SHKBP1-205ENST00000594973 GNA12Q03113 381 aa17.07■□□□□ 0.32
SHKBP1-205ENST00000594973 DNAJC14Q6Y2X3 702 aaPredicted RBP17.07■□□□□ 0.32
SHKBP1-205ENST00000594973 SPNS2Q8IVW8 549 aa17.07■□□□□ 0.32
SHKBP1-205ENST00000594973 DEFB107AQ8IZN7 70 aa17.07■□□□□ 0.32
SHKBP1-205ENST00000594973 TRIML2Q8N7C3 387 aa17.07■□□□□ 0.32
SHKBP1-205ENST00000594973 HIPK4Q8NE63 616 aa17.07■□□□□ 0.32
SHKBP1-205ENST00000594973 PPP4R1Q8TF05 950 aa17.07■□□□□ 0.32
SHKBP1-205ENST00000594973 KCTD4Q8WVF5 259 aa17.07■□□□□ 0.32
SHKBP1-205ENST00000594973 BORCS5Q969J3 196 aa17.07■□□□□ 0.32
SHKBP1-205ENST00000594973 MOCOSQ96EN8 888 aa17.07■□□□□ 0.32
SHKBP1-205ENST00000594973 ELMO2Q96JJ3 720 aa17.07■□□□□ 0.32
SHKBP1-205ENST00000594973 ZNF558Q96NG5 402 aa17.07■□□□□ 0.32
SHKBP1-205ENST00000594973 SOBPA7XYQ1 873 aa17.07■□□□□ 0.32
SHKBP1-205ENST00000594973 STC2O76061 302 aa17.07■□□□□ 0.32
SHKBP1-205ENST00000594973 GRK2P25098 689 aa17.07■□□□□ 0.32
SHKBP1-205ENST00000594973 HADHAP40939 763 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms