RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 CDK3Q00526 305 aa23.44■■□□□ 1.34
LSM4-204ENST00000594828 DPTQ07507 201 aa23.44■■□□□ 1.34
LSM4-204ENST00000594828 CCDC173Q0VFZ6 552 aa23.44■■□□□ 1.34
LSM4-204ENST00000594828 LRRC66Q68CR7 880 aa23.44■■□□□ 1.34
LSM4-204ENST00000594828 CNGA4Q8IV77 575 aa23.44■■□□□ 1.34
LSM4-204ENST00000594828 SMIM14Q96QK8 99 aa23.44■■□□□ 1.34
LSM4-204ENST00000594828 MAK16Q9BXY0 300 aaKnown RBP23.44■■□□□ 1.34
LSM4-204ENST00000594828 DPEP2Q9H4A9 486 aa23.44■■□□□ 1.34
LSM4-204ENST00000594828 CARS2Q9HA77 564 aaKnown RBP23.44■■□□□ 1.34
LSM4-204ENST00000594828 CELSR3Q9NYQ7 3312 aa23.44■■□□□ 1.34
LSM4-204ENST00000594828 RP1P56715 2156 aa23.43■■□□□ 1.34
LSM4-204ENST00000594828 AKR1B15C9JRZ8 316 aaPredicted RBP23.43■■□□□ 1.34
LSM4-204ENST00000594828 JCHAINP01591 159 aa23.43■■□□□ 1.34
LSM4-204ENST00000594828 CEACAM5P06731 702 aa23.43■■□□□ 1.34
LSM4-204ENST00000594828 ZNF30P17039 623 aa23.43■■□□□ 1.34
LSM4-204ENST00000594828 CA4P22748 312 aa23.43■■□□□ 1.34
LSM4-204ENST00000594828 GPR1P46091 355 aa23.43■■□□□ 1.34
LSM4-204ENST00000594828 ERVPABLB-1P60509 514 aa23.43■■□□□ 1.34
LSM4-204ENST00000594828 PTSQ03393 145 aa23.43■■□□□ 1.34
LSM4-204ENST00000594828 NIPAL4Q0D2K0 466 aa23.43■■□□□ 1.34
LSM4-204ENST00000594828 RFLNAQ6ZTI6 216 aa23.43■■□□□ 1.34
LSM4-204ENST00000594828 ZNF248Q8NDW4 579 aa23.43■■□□□ 1.34
LSM4-204ENST00000594828 TRAF3IP1Q8TDR0 691 aaPredicted RBP23.43■■□□□ 1.34
LSM4-204ENST00000594828 GFM1Q96RP9 751 aaKnown RBP23.43■■□□□ 1.34
LSM4-204ENST00000594828 LGMNQ99538 433 aa23.43■■□□□ 1.34
LSM4-204ENST00000594828 TDRD1Q9BXT4 1180 aaKnown RBP23.43■■□□□ 1.34
LSM4-204ENST00000594828 FRMD8Q9BZ67 464 aaPredicted RBP23.43■■□□□ 1.34
LSM4-204ENST00000594828 ABCG8Q9H221 673 aa23.43■■□□□ 1.34
LSM4-204ENST00000594828 SUDS3Q9H7L9 328 aaPredicted RBP23.43■■□□□ 1.34
LSM4-204ENST00000594828 CD84Q9UIB8 345 aa23.43■■□□□ 1.34
LSM4-204ENST00000594828 HEY1Q9Y5J3 304 aa23.43■■□□□ 1.34
LSM4-204ENST00000594828 ZNF487B1APH4 448 aa23.42■■□□□ 1.34
LSM4-204ENST00000594828 NOBOXO60393 691 aa23.42■■□□□ 1.34
LSM4-204ENST00000594828 FUCA1P04066 466 aa23.42■■□□□ 1.34
LSM4-204ENST00000594828 HOXB3P14651 431 aaPredicted RBP23.42■■□□□ 1.34
LSM4-204ENST00000594828 GLB1P16278 677 aa23.42■■□□□ 1.34
LSM4-204ENST00000594828 RBMS1P29558 406 aaKnown RBP23.42■■□□□ 1.34
LSM4-204ENST00000594828 PCBP4P57723 403 aaKnown RBP23.42■■□□□ 1.34
LSM4-204ENST00000594828 CCL7P80098 99 aa23.42■■□□□ 1.34
LSM4-204ENST00000594828 PPIDQ08752 370 aaKnown RBP23.42■■□□□ 1.34
LSM4-204ENST00000594828 VSIG1Q86XK7 387 aa23.42■■□□□ 1.34
LSM4-204ENST00000594828 PLD5Q8N7P1 536 aa23.42■■□□□ 1.34
LSM4-204ENST00000594828 GPBAR1Q8TDU6 330 aa23.42■■□□□ 1.34
LSM4-204ENST00000594828 AP2M1Q96CW1 435 aa23.42■■□□□ 1.34
LSM4-204ENST00000594828 PCDH9Q9HC56 1237 aa23.42■■□□□ 1.34
LSM4-204ENST00000594828 THSD1Q9NS62 852 aa23.42■■□□□ 1.34
LSM4-204ENST00000594828 DNPEPQ9ULA0 475 aa23.42■■□□□ 1.34
LSM4-204ENST00000594828 INTUQ9ULD6 942 aa23.42■■□□□ 1.34
LSM4-204ENST00000594828 COL27A1Q8IZC6 1860 aaPredicted RBP23.42■■□□□ 1.34
LSM4-204ENST00000594828 A0A1W2PNU3 283 aaPredicted RBP23.41■■□□□ 1.34
LSM4-204ENST00000594828 C3orf70A6NLC5 250 aaPredicted RBP23.41■■□□□ 1.34
LSM4-204ENST00000594828 B4DGG1 531 aa23.41■■□□□ 1.34
LSM4-204ENST00000594828 KCNK1O00180 336 aa23.41■■□□□ 1.34
LSM4-204ENST00000594828 PRLP01236 227 aa23.41■■□□□ 1.34
LSM4-204ENST00000594828 RPLP0P05388 317 aaKnown RBP23.41■■□□□ 1.34
LSM4-204ENST00000594828 GNPDA1P46926 289 aa23.41■■□□□ 1.34
LSM4-204ENST00000594828 PDX1P52945 283 aa23.41■■□□□ 1.34
LSM4-204ENST00000594828 RPL26P61254 145 aaKnown RBP23.41■■□□□ 1.34
LSM4-204ENST00000594828 TBX2Q13207 712 aaPredicted RBP23.41■■□□□ 1.34
LSM4-204ENST00000594828 C14orf28Q4W4Y0 310 aa23.41■■□□□ 1.34
LSM4-204ENST00000594828 ODF2Q5BJF6 829 aa23.41■■□□□ 1.34
LSM4-204ENST00000594828 LRRC38Q5VT99 294 aa23.41■■□□□ 1.34
LSM4-204ENST00000594828 SLC9A4Q6AI14 798 aa23.41■■□□□ 1.34
LSM4-204ENST00000594828 IGF2-ASQ6U949 168 aa23.41■■□□□ 1.34
LSM4-204ENST00000594828 NLRP8Q86W28 1048 aa23.41■■□□□ 1.34
LSM4-204ENST00000594828 SFTPA2Q8IWL1 248 aa23.41■■□□□ 1.34
LSM4-204ENST00000594828 WDR36Q8NI36 951 aaKnown RBP23.41■■□□□ 1.34
LSM4-204ENST00000594828 HIC2Q96JB3 615 aa23.41■■□□□ 1.34
LSM4-204ENST00000594828 SLC46A1Q96NT5 459 aa23.41■■□□□ 1.34
LSM4-204ENST00000594828 ANP32EQ9BTT0 268 aa23.41■■□□□ 1.34
LSM4-204ENST00000594828 GSDMCQ9BYG8 508 aa23.41■■□□□ 1.34
LSM4-204ENST00000594828 LRRN3Q9H3W5 708 aa23.41■■□□□ 1.34
LSM4-204ENST00000594828 ASCL3Q9NQ33 180 aa23.41■■□□□ 1.34
LSM4-204ENST00000594828 TRNAU1APQ9NX07 287 aaKnown RBP23.41■■□□□ 1.34
LSM4-204ENST00000594828 APPL1Q9UKG1 709 aa23.41■■□□□ 1.34
LSM4-204ENST00000594828 SUFUQ9UMX1 484 aa23.41■■□□□ 1.34
LSM4-204ENST00000594828 RPL26L1Q9UNX3 145 aaKnown RBP23.41■■□□□ 1.34
LSM4-204ENST00000594828 PCDHGA8Q9Y5G5 932 aa23.41■■□□□ 1.34
LSM4-204ENST00000594828 A0A1W2PQM1 296 aa23.4■■□□□ 1.34
LSM4-204ENST00000594828 CAPN8A6NHC0 703 aa23.4■■□□□ 1.34
LSM4-204ENST00000594828 APOL1O14791 398 aa23.4■■□□□ 1.34
LSM4-204ENST00000594828 PNLIPP16233 465 aa23.4■■□□□ 1.34
LSM4-204ENST00000594828 SLC1A1P43005 524 aa23.4■■□□□ 1.34
LSM4-204ENST00000594828 POLD2P49005 469 aa23.4■■□□□ 1.34
LSM4-204ENST00000594828 ILF3Q12906 894 aaKnown RBP eCLIP23.4■■□□□ 1.34
LSM4-204ENST00000594828 CERCAMQ5T4B2 595 aa23.4■■□□□ 1.34
LSM4-204ENST00000594828 FOXR1Q6PIV2 292 aa23.4■■□□□ 1.34
LSM4-204ENST00000594828 ZNF765Q7L2R6 523 aa23.4■■□□□ 1.34
LSM4-204ENST00000594828 SPACA3Q8IXA5 215 aa23.4■■□□□ 1.34
LSM4-204ENST00000594828 Q8N9G6 341 aaPredicted RBP23.4■■□□□ 1.34
LSM4-204ENST00000594828 LPCAT1Q8NF37 534 aa23.4■■□□□ 1.34
LSM4-204ENST00000594828 KIAA1524Q8TCG1 905 aa23.4■■□□□ 1.34
LSM4-204ENST00000594828 SCAMP4Q969E2 229 aa23.4■■□□□ 1.34
LSM4-204ENST00000594828 RNF25Q96BH1 459 aaPredicted RBP23.4■■□□□ 1.34
LSM4-204ENST00000594828 NAF1Q96HR8 494 aaKnown RBP23.4■■□□□ 1.34
LSM4-204ENST00000594828 SPATS2LQ9NUQ6 558 aaKnown RBP23.4■■□□□ 1.34
LSM4-204ENST00000594828 LRIT1Q9P2V4 623 aa23.4■■□□□ 1.34
LSM4-204ENST00000594828 SLC17A4Q9Y2C5 497 aa23.4■■□□□ 1.34
LSM4-204ENST00000594828 CCDC187A0A096LP49 1063 aa23.39■■□□□ 1.33
LSM4-204ENST00000594828 TMX2-CTNND1H3BSU7 103 aa23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms