RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 PCCBP05166 539 aa25.73■■□□□ 1.71
TRIM28-204ENST00000594806 C1SP09871 688 aa25.73■■□□□ 1.71
TRIM28-204ENST00000594806 CD59P13987 128 aa25.73■■□□□ 1.71
TRIM28-204ENST00000594806 CSRP1P21291 193 aaKnown RBP25.73■■□□□ 1.71
TRIM28-204ENST00000594806 ADRA1AP35348 466 aa25.73■■□□□ 1.71
TRIM28-204ENST00000594806 FZD2Q14332 565 aa25.73■■□□□ 1.71
TRIM28-204ENST00000594806 INAVAQ3KP66 663 aa25.73■■□□□ 1.71
TRIM28-204ENST00000594806 SIRPB2Q5JXA9 342 aa25.73■■□□□ 1.71
TRIM28-204ENST00000594806 MACC1Q6ZN28 852 aa25.73■■□□□ 1.71
TRIM28-204ENST00000594806 TMC3Q7Z5M5 1100 aa25.73■■□□□ 1.71
TRIM28-204ENST00000594806 CCDC89Q8N998 374 aa25.73■■□□□ 1.71
TRIM28-204ENST00000594806 ZNF711Q9Y462 761 aa25.73■■□□□ 1.71
TRIM28-204ENST00000594806 CFAP54Q96N23 3096 aa25.73■■□□□ 1.71
TRIM28-204ENST00000594806 PCNX2A6NKB5 2137 aa25.72■■□□□ 1.71
TRIM28-204ENST00000594806 ERI2A8K979 691 aaKnown RBP25.72■■□□□ 1.71
TRIM28-204ENST00000594806 F5H423 210 aaPredicted RBP25.72■■□□□ 1.71
TRIM28-204ENST00000594806 PDE2AO00408 941 aaPredicted RBP25.72■■□□□ 1.71
TRIM28-204ENST00000594806 FLRT2O43155 660 aa25.72■■□□□ 1.71
TRIM28-204ENST00000594806 KELP23276 732 aa25.72■■□□□ 1.71
TRIM28-204ENST00000594806 FDFT1P37268 417 aa25.72■■□□□ 1.71
TRIM28-204ENST00000594806 SPINT3P49223 89 aa25.72■■□□□ 1.71
TRIM28-204ENST00000594806 NAPGQ99747 312 aaPredicted RBP25.72■■□□□ 1.71
TRIM28-204ENST00000594806 FICDQ9BVA6 458 aa25.72■■□□□ 1.71
TRIM28-204ENST00000594806 GPR63Q9BZJ6 419 aa25.72■■□□□ 1.71
TRIM28-204ENST00000594806 SLC32A1Q9H598 525 aa25.72■■□□□ 1.71
TRIM28-204ENST00000594806 PAK5Q9P286 719 aa25.72■■□□□ 1.71
TRIM28-204ENST00000594806 LAMA1P25391 3075 aa25.72■■□□□ 1.71
TRIM28-204ENST00000594806 H3BM21 787 aa25.71■■□□□ 1.71
TRIM28-204ENST00000594806 CACNB4O00305 520 aaPredicted RBP25.71■■□□□ 1.71
TRIM28-204ENST00000594806 IFNB1P01574 187 aa25.71■■□□□ 1.71
TRIM28-204ENST00000594806 EPHA8P29322 1005 aaPredicted RBP25.71■■□□□ 1.71
TRIM28-204ENST00000594806 KIAA1024LP59773 190 aa25.71■■□□□ 1.71
TRIM28-204ENST00000594806 HNRNPKP61978 463 aaKnown RBP eCLIP25.71■■□□□ 1.71
TRIM28-204ENST00000594806 NFATC4Q14934 902 aa25.71■■□□□ 1.71
TRIM28-204ENST00000594806 PAPD7Q5XG87 772 aaKnown RBP25.71■■□□□ 1.71
TRIM28-204ENST00000594806 KCTD11Q693B1 232 aa25.71■■□□□ 1.71
TRIM28-204ENST00000594806 LYSMD3Q7Z3D4 306 aa25.71■■□□□ 1.71
TRIM28-204ENST00000594806 SLC25A41Q8N5S1 370 aa25.71■■□□□ 1.71
TRIM28-204ENST00000594806 PRELID2Q8N945 189 aa25.71■■□□□ 1.71
TRIM28-204ENST00000594806 PLA2G15Q8NCC3 412 aa25.71■■□□□ 1.71
TRIM28-204ENST00000594806 BTN2A2Q8WVV5 523 aa25.71■■□□□ 1.71
TRIM28-204ENST00000594806 AP2M1Q96CW1 435 aa25.71■■□□□ 1.71
TRIM28-204ENST00000594806 ABCG8Q9H221 673 aa25.71■■□□□ 1.71
TRIM28-204ENST00000594806 WDR26Q9H7D7 661 aa25.71■■□□□ 1.71
TRIM28-204ENST00000594806 LRRC40Q9H9A6 602 aa25.71■■□□□ 1.71
TRIM28-204ENST00000594806 ARNT2Q9HBZ2 717 aa25.71■■□□□ 1.71
TRIM28-204ENST00000594806 NFKBIL1Q9UBC1 381 aaPredicted RBP25.71■■□□□ 1.71
TRIM28-204ENST00000594806 TDRD6O60522 2096 aaKnown RBP25.71■■□□□ 1.71
TRIM28-204ENST00000594806 CTAGE9A4FU28 777 aa25.7■■□□□ 1.7
TRIM28-204ENST00000594806 METTL18O95568 372 aa25.7■■□□□ 1.7
TRIM28-204ENST00000594806 AGTP01019 485 aa25.7■■□□□ 1.7
TRIM28-204ENST00000594806 CSF2P04141 144 aa25.7■■□□□ 1.7
TRIM28-204ENST00000594806 NME1P15531 152 aaKnown RBP25.7■■□□□ 1.7
TRIM28-204ENST00000594806 HMGCLP35914 325 aa25.7■■□□□ 1.7
TRIM28-204ENST00000594806 BLKP51451 505 aa25.7■■□□□ 1.7
TRIM28-204ENST00000594806 SHBQ15464 509 aa25.7■■□□□ 1.7
TRIM28-204ENST00000594806 PRAMEF14Q5SWL7 426 aa25.7■■□□□ 1.7
TRIM28-204ENST00000594806 PIP4P1Q86T03 277 aa25.7■■□□□ 1.7
TRIM28-204ENST00000594806 SAP25Q8TEE9 199 aa25.7■■□□□ 1.7
TRIM28-204ENST00000594806 COG1Q8WTW3 980 aa25.7■■□□□ 1.7
TRIM28-204ENST00000594806 MS4A14Q96JA4 679 aa25.7■■□□□ 1.7
TRIM28-204ENST00000594806 TBATAQ96M53 351 aa25.7■■□□□ 1.7
TRIM28-204ENST00000594806 TBL1YQ9BQ87 522 aa25.7■■□□□ 1.7
TRIM28-204ENST00000594806 TEX101Q9BY14 249 aa25.7■■□□□ 1.7
TRIM28-204ENST00000594806 PHPT1Q9NRX4 125 aaPredicted RBP25.7■■□□□ 1.7
TRIM28-204ENST00000594806 SHOC2Q9UQ13 582 aa25.7■■□□□ 1.7
TRIM28-204ENST00000594806 GOLGA6L10A0A0M3HER8 536 aa25.69■■□□□ 1.7
TRIM28-204ENST00000594806 A0A0U1RQS6 177 aa25.69■■□□□ 1.7
TRIM28-204ENST00000594806 GPR1P46091 355 aa25.69■■□□□ 1.7
TRIM28-204ENST00000594806 DCDC1P59894 354 aa25.69■■□□□ 1.7
TRIM28-204ENST00000594806 CYP1B1Q16678 543 aa25.69■■□□□ 1.7
TRIM28-204ENST00000594806 ZDHHC20Q5W0Z9 365 aa25.69■■□□□ 1.7
TRIM28-204ENST00000594806 RAET1GQ6H3X3 334 aa25.69■■□□□ 1.7
TRIM28-204ENST00000594806 LINC00523Q86TU6 105 aa25.69■■□□□ 1.7
TRIM28-204ENST00000594806 WDR92Q96MX6 357 aa25.69■■□□□ 1.7
TRIM28-204ENST00000594806 WDR24Q96S15 920 aa25.69■■□□□ 1.7
TRIM28-204ENST00000594806 FAM83DQ9H4H8 585 aa25.69■■□□□ 1.7
TRIM28-204ENST00000594806 DNAJC28Q9NX36 388 aa25.69■■□□□ 1.7
TRIM28-204ENST00000594806 OR1A2Q9Y585 309 aa25.69■■□□□ 1.7
TRIM28-204ENST00000594806 SPTBN4Q9H254 2564 aa25.69■■□□□ 1.7
TRIM28-204ENST00000594806 GOLGA8CPA6NN73 597 aa25.68■■□□□ 1.7
TRIM28-204ENST00000594806 TNFRSF10CO14798 259 aa25.68■■□□□ 1.7
TRIM28-204ENST00000594806 PPFIA2O75334 1257 aa25.68■■□□□ 1.7
TRIM28-204ENST00000594806 AP2A1O95782 977 aa25.68■■□□□ 1.7
TRIM28-204ENST00000594806 PIRTP0C851 137 aa25.68■■□□□ 1.7
TRIM28-204ENST00000594806 MYCLP1P12525 358 aaPredicted RBP25.68■■□□□ 1.7
TRIM28-204ENST00000594806 GRK6P43250 576 aa25.68■■□□□ 1.7
TRIM28-204ENST00000594806 CHRNA4P43681 627 aa25.68■■□□□ 1.7
TRIM28-204ENST00000594806 EIF2B5Q13144 721 aaKnown RBP25.68■■□□□ 1.7
TRIM28-204ENST00000594806 TPRG1LQ5T0D9 272 aa25.68■■□□□ 1.7
TRIM28-204ENST00000594806 ADAMTSL4Q6UY14 1074 aa25.68■■□□□ 1.7
TRIM28-204ENST00000594806 GSTA5Q7RTV2 222 aa25.68■■□□□ 1.7
TRIM28-204ENST00000594806 NAXDQ8IW45 347 aa25.68■■□□□ 1.7
TRIM28-204ENST00000594806 MAGOHBQ96A72 148 aaKnown RBP25.68■■□□□ 1.7
TRIM28-204ENST00000594806 FUBP1Q96AE4 644 aaKnown RBP25.68■■□□□ 1.7
TRIM28-204ENST00000594806 EID2BQ96D98 161 aa25.68■■□□□ 1.7
TRIM28-204ENST00000594806 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP25.68■■□□□ 1.7
TRIM28-204ENST00000594806 SPO11Q9Y5K1 396 aa25.68■■□□□ 1.7
TRIM28-204ENST00000594806 SAR1BQ9Y6B6 198 aa25.68■■□□□ 1.7
TRIM28-204ENST00000594806 CNOT1A5YKK6 2376 aaKnown RBP25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms