RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 SRP54P61011 504 aaKnown RBP9.49□□□□□ -0.89
BRCA1-226ENST00000591534 TBX2Q13207 712 aaPredicted RBP9.49□□□□□ -0.89
BRCA1-226ENST00000591534 MTM1Q13496 603 aa9.49□□□□□ -0.89
BRCA1-226ENST00000591534 ARHGEF7Q14155 803 aa9.49□□□□□ -0.89
BRCA1-226ENST00000591534 LY6DQ14210 128 aa9.49□□□□□ -0.89
BRCA1-226ENST00000591534 LBRQ14739 615 aaKnown RBP9.49□□□□□ -0.89
BRCA1-226ENST00000591534 IRF4Q15306 451 aa9.49□□□□□ -0.89
BRCA1-226ENST00000591534 SPA17Q15506 151 aa9.49□□□□□ -0.89
BRCA1-226ENST00000591534 UGP2Q16851 508 aa9.49□□□□□ -0.89
BRCA1-226ENST00000591534 RAB6CQ53S08 254 aa9.49□□□□□ -0.89
BRCA1-226ENST00000591534 TPRG1LQ5T0D9 272 aa9.49□□□□□ -0.89
BRCA1-226ENST00000591534 ALG1LQ6GMV1 187 aa9.49□□□□□ -0.89
BRCA1-226ENST00000591534 SCYL2Q6P3W7 929 aa9.49□□□□□ -0.89
BRCA1-226ENST00000591534 FIGNL1Q6PIW4 674 aa9.49□□□□□ -0.89
BRCA1-226ENST00000591534 LEKR1Q6ZMV7 388 aa9.49□□□□□ -0.89
BRCA1-226ENST00000591534 RD3Q7Z3Z2 195 aa9.49□□□□□ -0.89
BRCA1-226ENST00000591534 PHLDB2Q86SQ0 1253 aa9.49□□□□□ -0.89
BRCA1-226ENST00000591534 PCDH19Q8TAB3 1148 aa9.49□□□□□ -0.89
BRCA1-226ENST00000591534 EPS8L3Q8TE67 593 aaKnown RBP9.49□□□□□ -0.89
BRCA1-226ENST00000591534 GTPBP3Q969Y2 492 aaKnown RBP9.49□□□□□ -0.89
BRCA1-226ENST00000591534 CCDC74AQ96AQ1 378 aa9.49□□□□□ -0.89
BRCA1-226ENST00000591534 HMCESQ96FZ2 354 aa9.49□□□□□ -0.89
BRCA1-226ENST00000591534 PRR11Q96HE9 360 aaPredicted RBP9.49□□□□□ -0.89
BRCA1-226ENST00000591534 WDR92Q96MX6 357 aa9.49□□□□□ -0.89
BRCA1-226ENST00000591534 PCDHB18PQ96TA0 734 aa9.49□□□□□ -0.89
BRCA1-226ENST00000591534 DNAJC7Q99615 494 aa9.49□□□□□ -0.89
BRCA1-226ENST00000591534 CMKLR1Q99788 373 aa9.49□□□□□ -0.89
BRCA1-226ENST00000591534 C11orf70Q9BRQ4 267 aa9.49□□□□□ -0.89
BRCA1-226ENST00000591534 APOOQ9BUR5 198 aa9.49□□□□□ -0.89
BRCA1-226ENST00000591534 CLPBQ9H078 707 aa9.49□□□□□ -0.89
BRCA1-226ENST00000591534 RAB6CQ9H0N0 254 aa9.49□□□□□ -0.89
BRCA1-226ENST00000591534 TCEAL2Q9H3H9 227 aaPredicted RBP9.49□□□□□ -0.89
BRCA1-226ENST00000591534 DEF6Q9H4E7 631 aa9.49□□□□□ -0.89
BRCA1-226ENST00000591534 SUV39H2Q9H5I1 410 aa9.49□□□□□ -0.89
BRCA1-226ENST00000591534 ATP13A3Q9H7F0 1226 aa9.49□□□□□ -0.89
BRCA1-226ENST00000591534 IGSF5Q9NSI5 407 aa9.49□□□□□ -0.89
BRCA1-226ENST00000591534 NDFIP2Q9NV92 336 aa9.49□□□□□ -0.89
BRCA1-226ENST00000591534 KCTD5Q9NXV2 234 aa9.49□□□□□ -0.89
BRCA1-226ENST00000591534 SIRPGQ9P1W8 387 aa9.49□□□□□ -0.89
BRCA1-226ENST00000591534 UBA2Q9UBT2 640 aaPredicted RBP9.49□□□□□ -0.89
BRCA1-226ENST00000591534 GGT7Q9UJ14 662 aa9.49□□□□□ -0.89
BRCA1-226ENST00000591534 NOCTQ9UK39 431 aaKnown RBP9.49□□□□□ -0.89
BRCA1-226ENST00000591534 ACSL6Q9UKU0 697 aa9.49□□□□□ -0.89
BRCA1-226ENST00000591534 ACTL7AQ9Y615 435 aa9.49□□□□□ -0.89
BRCA1-226ENST00000591534 ARID1BQ8NFD5 2236 aaPredicted RBP9.49□□□□□ -0.89
BRCA1-226ENST00000591534 SETXQ7Z333 2677 aaKnown RBP9.49□□□□□ -0.89
BRCA1-226ENST00000591534 MGAQ8IWI9 3026 aa9.48□□□□□ -0.89
BRCA1-226ENST00000591534 TP53BP1Q12888 1972 aaPredicted RBP9.48□□□□□ -0.89
BRCA1-226ENST00000591534 SSU72P8A0A1W2PR75 194 aa9.48□□□□□ -0.89
BRCA1-226ENST00000591534 SIGLEC16A6NMB1 481 aa9.48□□□□□ -0.89
BRCA1-226ENST00000591534 WASH4PA8MWX3 477 aa9.48□□□□□ -0.89
BRCA1-226ENST00000591534 EIF3CLB5ME19 914 aaKnown RBP9.48□□□□□ -0.89
BRCA1-226ENST00000591534 RASA4BC9J798 803 aa9.48□□□□□ -0.89
BRCA1-226ENST00000591534 D6RAR5 112 aa9.48□□□□□ -0.89
BRCA1-226ENST00000591534 FAM72CH0Y354 149 aa9.48□□□□□ -0.89
BRCA1-226ENST00000591534 NVLO15381 856 aaKnown RBP9.48□□□□□ -0.89
BRCA1-226ENST00000591534 RASA4O43374 803 aa9.48□□□□□ -0.89
BRCA1-226ENST00000591534 SLC28A2O43868 658 aa9.48□□□□□ -0.89
BRCA1-226ENST00000591534 CREB3O43889 395 aa9.48□□□□□ -0.89
BRCA1-226ENST00000591534 RPLP0P05388 317 aaKnown RBP9.48□□□□□ -0.89
BRCA1-226ENST00000591534 LIPCP11150 499 aa9.48□□□□□ -0.89
BRCA1-226ENST00000591534 SKILP12757 684 aa9.48□□□□□ -0.89
BRCA1-226ENST00000591534 GLB1P16278 677 aa9.48□□□□□ -0.89
BRCA1-226ENST00000591534 CD33P20138 364 aa9.48□□□□□ -0.89
BRCA1-226ENST00000591534 CD82P27701 267 aa9.48□□□□□ -0.89
BRCA1-226ENST00000591534 SERPINA4P29622 427 aa9.48□□□□□ -0.89
BRCA1-226ENST00000591534 SLC5A2P31639 672 aa9.48□□□□□ -0.89
BRCA1-226ENST00000591534 UGT1A5P35504 534 aa9.48□□□□□ -0.89
BRCA1-226ENST00000591534 SOX5P35711 763 aa9.48□□□□□ -0.89
BRCA1-226ENST00000591534 LIG3P49916 1009 aa9.48□□□□□ -0.89
BRCA1-226ENST00000591534 HDAC4P56524 1084 aa9.48□□□□□ -0.89
BRCA1-226ENST00000591534 GSCP56915 257 aaPredicted RBP9.48□□□□□ -0.89
BRCA1-226ENST00000591534 FMO1Q01740 532 aa9.48□□□□□ -0.89
BRCA1-226ENST00000591534 SERINC3Q13530 473 aa9.48□□□□□ -0.89
BRCA1-226ENST00000591534 INPP5AQ14642 412 aa9.48□□□□□ -0.89
BRCA1-226ENST00000591534 ALG11Q2TAA5 492 aa9.48□□□□□ -0.89
BRCA1-226ENST00000591534 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.48□□□□□ -0.89
BRCA1-226ENST00000591534 ARTNQ5T4W7 220 aa9.48□□□□□ -0.89
BRCA1-226ENST00000591534 FAM72AQ5TYM5 149 aa9.48□□□□□ -0.89
BRCA1-226ENST00000591534 FAM72DQ6L9T8 149 aa9.48□□□□□ -0.89
BRCA1-226ENST00000591534 DNAJC24Q6P3W2 148 aa9.48□□□□□ -0.89
BRCA1-226ENST00000591534 DCUN1D2Q6PH85 259 aa9.48□□□□□ -0.89
BRCA1-226ENST00000591534 TAF8Q7Z7C8 310 aa9.48□□□□□ -0.89
BRCA1-226ENST00000591534 FAM72BQ86X60 149 aa9.48□□□□□ -0.89
BRCA1-226ENST00000591534 UMODL1-AS1Q8N2C9 162 aa9.48□□□□□ -0.89
BRCA1-226ENST00000591534 CCDC185Q8N715 623 aa9.48□□□□□ -0.89
BRCA1-226ENST00000591534 C3orf20Q8ND61 904 aa9.48□□□□□ -0.89
BRCA1-226ENST00000591534 SLC30A5Q8TAD4 765 aa9.48□□□□□ -0.89
BRCA1-226ENST00000591534 KIAA1524Q8TCG1 905 aa9.48□□□□□ -0.89
BRCA1-226ENST00000591534 TSACCQ96A04 125 aaPredicted RBP9.48□□□□□ -0.89
BRCA1-226ENST00000591534 ZNF837Q96EG3 531 aaPredicted RBP9.48□□□□□ -0.89
BRCA1-226ENST00000591534 SGF29Q96ES7 293 aa9.48□□□□□ -0.89
BRCA1-226ENST00000591534 CCDC42Q96M95 316 aa9.48□□□□□ -0.89
BRCA1-226ENST00000591534 EIF3CQ99613 913 aaKnown RBP9.48□□□□□ -0.89
BRCA1-226ENST00000591534 TSGA10Q9BZW7 698 aa9.48□□□□□ -0.89
BRCA1-226ENST00000591534 LRRN3Q9H3W5 708 aa9.48□□□□□ -0.89
BRCA1-226ENST00000591534 PCDH12Q9NPG4 1184 aa9.48□□□□□ -0.89
BRCA1-226ENST00000591534 MBNL1Q9NR56 388 aaKnown RBP9.48□□□□□ -0.89
BRCA1-226ENST00000591534 ABHD10Q9NUJ1 306 aa9.48□□□□□ -0.89
BRCA1-226ENST00000591534 APPL1Q9UKG1 709 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms