RNA–Protein interactions for RNA: ENST00000591515.6

LSM7-206, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM7, Length 710 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-206ENST00000591515 SNX12Q9UMY4 172 aa23.21■■□□□ 1.31
LSM7-206ENST00000591515 RPL26L1Q9UNX3 145 aaKnown RBP23.21■■□□□ 1.31
LSM7-206ENST00000591515 DMTF1Q9Y222 760 aa23.21■■□□□ 1.31
LSM7-206ENST00000591515 PCDHGC4Q9Y5F7 938 aa23.21■■□□□ 1.31
LSM7-206ENST00000591515 FADS3Q9Y5Q0 445 aa23.21■■□□□ 1.31
LSM7-206ENST00000591515 COL27A1Q8IZC6 1860 aaPredicted RBP23.2■■□□□ 1.3
LSM7-206ENST00000591515 TRAFD1O14545 582 aaPredicted RBP23.2■■□□□ 1.3
LSM7-206ENST00000591515 RNGTTO60942 597 aaKnown RBP23.2■■□□□ 1.3
LSM7-206ENST00000591515 TIMP2P16035 220 aa23.2■■□□□ 1.3
LSM7-206ENST00000591515 CD86P42081 329 aa23.2■■□□□ 1.3
LSM7-206ENST00000591515 EPHB1P54762 984 aa23.2■■□□□ 1.3
LSM7-206ENST00000591515 PPP2CBP62714 309 aa23.2■■□□□ 1.3
LSM7-206ENST00000591515 PPP2CAP67775 309 aa23.2■■□□□ 1.3
LSM7-206ENST00000591515 KCNC4Q03721 635 aa23.2■■□□□ 1.3
LSM7-206ENST00000591515 CCNG2Q16589 344 aa23.2■■□□□ 1.3
LSM7-206ENST00000591515 B4GALNT4Q76KP1 1039 aa23.2■■□□□ 1.3
LSM7-206ENST00000591515 HORMAD1Q86X24 394 aa23.2■■□□□ 1.3
LSM7-206ENST00000591515 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP23.2■■□□□ 1.3
LSM7-206ENST00000591515 ARRDC2Q8TBH0 407 aa23.2■■□□□ 1.3
LSM7-206ENST00000591515 CXorf40AQ8TE69 158 aa23.2■■□□□ 1.3
LSM7-206ENST00000591515 IMP4Q96G21 291 aaKnown RBP23.2■■□□□ 1.3
LSM7-206ENST00000591515 OSBPL9Q96SU4 736 aa23.2■■□□□ 1.3
LSM7-206ENST00000591515 ADGRE3Q9BY15 652 aa23.2■■□□□ 1.3
LSM7-206ENST00000591515 CEP41Q9BYV8 373 aa23.2■■□□□ 1.3
LSM7-206ENST00000591515 RSPH14Q9UHP6 348 aa23.2■■□□□ 1.3
LSM7-206ENST00000591515 DNPEPQ9ULA0 475 aa23.2■■□□□ 1.3
LSM7-206ENST00000591515 TTC7AQ9ULT0 858 aaPredicted RBP23.2■■□□□ 1.3
LSM7-206ENST00000591515 GOLGA6CA6NDK9 693 aa23.19■■□□□ 1.3
LSM7-206ENST00000591515 GOLGA6BA6NDN3 693 aa23.19■■□□□ 1.3
LSM7-206ENST00000591515 PGRMC1O00264 195 aaKnown RBP23.19■■□□□ 1.3
LSM7-206ENST00000591515 TRIM38O00635 465 aa23.19■■□□□ 1.3
LSM7-206ENST00000591515 SDC3O75056 442 aa23.19■■□□□ 1.3
LSM7-206ENST00000591515 PGLSO95336 258 aa23.19■■□□□ 1.3
LSM7-206ENST00000591515 MPOP05164 745 aa23.19■■□□□ 1.3
LSM7-206ENST00000591515 GOLGA6DP0CG33 693 aa23.19■■□□□ 1.3
LSM7-206ENST00000591515 CYP2A6P11509 494 aaPredicted RBP23.19■■□□□ 1.3
LSM7-206ENST00000591515 PRLRP16471 622 aa23.19■■□□□ 1.3
LSM7-206ENST00000591515 ABL2P42684 1182 aa23.19■■□□□ 1.3
LSM7-206ENST00000591515 TAS2R38P59533 333 aa23.19■■□□□ 1.3
LSM7-206ENST00000591515 TRAF2Q12933 501 aa23.19■■□□□ 1.3
LSM7-206ENST00000591515 USP45Q70EL2 814 aa23.19■■□□□ 1.3
LSM7-206ENST00000591515 ZNF567Q8N184 647 aa23.19■■□□□ 1.3
LSM7-206ENST00000591515 RASGEF1CQ8N431 466 aa23.19■■□□□ 1.3
LSM7-206ENST00000591515 FCRL5Q96RD9 977 aa23.19■■□□□ 1.3
LSM7-206ENST00000591515 FAM118BQ9BPY3 351 aa23.19■■□□□ 1.3
LSM7-206ENST00000591515 C1QTNF7Q9BXJ2 289 aa23.19■■□□□ 1.3
LSM7-206ENST00000591515 TDRD1Q9BXT4 1180 aaKnown RBP23.19■■□□□ 1.3
LSM7-206ENST00000591515 GOLGA6AQ9NYA3 693 aa23.19■■□□□ 1.3
LSM7-206ENST00000591515 ZNF148Q9UQR1 794 aa23.19■■□□□ 1.3
LSM7-206ENST00000591515 KIF26BQ2KJY2 2108 aa23.18■■□□□ 1.3
LSM7-206ENST00000591515 GOLGA6L10A0A0M3HER8 536 aa23.18■■□□□ 1.3
LSM7-206ENST00000591515 A0A1W2PQU0 124 aa23.18■■□□□ 1.3
LSM7-206ENST00000591515 TCRBV7S2A1N4TA0A589 114 aa23.18■■□□□ 1.3
LSM7-206ENST00000591515 TTC24A2A3L6 582 aaPredicted RBP23.18■■□□□ 1.3
LSM7-206ENST00000591515 AREL1O15033 823 aa23.18■■□□□ 1.3
LSM7-206ENST00000591515 SIGLEC6O43699 453 aa23.18■■□□□ 1.3
LSM7-206ENST00000591515 LIASO43766 372 aa23.18■■□□□ 1.3
LSM7-206ENST00000591515 ANXA9O76027 345 aa23.18■■□□□ 1.3
LSM7-206ENST00000591515 WISP1O95388 367 aa23.18■■□□□ 1.3
LSM7-206ENST00000591515 E2F1Q01094 437 aa23.18■■□□□ 1.3
LSM7-206ENST00000591515 NIPAL4Q0D2K0 466 aa23.18■■□□□ 1.3
LSM7-206ENST00000591515 SGCGQ13326 291 aa23.18■■□□□ 1.3
LSM7-206ENST00000591515 NAPEPLDQ6IQ20 393 aa23.18■■□□□ 1.3
LSM7-206ENST00000591515 MFSD2AQ8NA29 543 aa23.18■■□□□ 1.3
LSM7-206ENST00000591515 VOPP1Q96AW1 172 aa23.18■■□□□ 1.3
LSM7-206ENST00000591515 IFT43Q96FT9 208 aa23.18■■□□□ 1.3
LSM7-206ENST00000591515 SPATA13Q96N96 652 aa23.18■■□□□ 1.3
LSM7-206ENST00000591515 PCDH9Q9HC56 1237 aa23.18■■□□□ 1.3
LSM7-206ENST00000591515 FAM153AQ9UHL3 310 aa23.18■■□□□ 1.3
LSM7-206ENST00000591515 R3HDM2Q9Y2K5 976 aaKnown RBP23.18■■□□□ 1.3
LSM7-206ENST00000591515 C5orf60A6NFR6 353 aa23.17■■□□□ 1.3
LSM7-206ENST00000591515 RIOK3O14730 519 aaKnown RBP23.17■■□□□ 1.3
LSM7-206ENST00000591515 LATO43561 262 aa23.17■■□□□ 1.3
LSM7-206ENST00000591515 DXOO77932 396 aaKnown RBP23.17■■□□□ 1.3
LSM7-206ENST00000591515 NFKB1P19838 968 aa23.17■■□□□ 1.3
LSM7-206ENST00000591515 GABREP78334 506 aa23.17■■□□□ 1.3
LSM7-206ENST00000591515 SKOR1P84550 965 aa23.17■■□□□ 1.3
LSM7-206ENST00000591515 TMEM52BQ4KMG9 183 aa23.17■■□□□ 1.3
LSM7-206ENST00000591515 ANKRD20A2Q5SQ80 823 aa23.17■■□□□ 1.3
LSM7-206ENST00000591515 ANKRD20A1Q5TYW2 823 aa23.17■■□□□ 1.3
LSM7-206ENST00000591515 ANKRD20A3Q5VUR7 823 aa23.17■■□□□ 1.3
LSM7-206ENST00000591515 DRICH1Q6PGQ1 229 aaPredicted RBP23.17■■□□□ 1.3
LSM7-206ENST00000591515 ARHGEF18Q6ZSZ5 1173 aa23.17■■□□□ 1.3
LSM7-206ENST00000591515 KCNE4Q8WWG9 221 aa23.17■■□□□ 1.3
LSM7-206ENST00000591515 SRPK1Q96SB4 655 aaKnown RBP23.17■■□□□ 1.3
LSM7-206ENST00000591515 RBM15Q96T37 977 aaKnown RBP eCLIP23.17■■□□□ 1.3
LSM7-206ENST00000591515 GBA3Q9H227 469 aa23.17■■□□□ 1.3
LSM7-206ENST00000591515 PCDH12Q9NPG4 1184 aa23.17■■□□□ 1.3
LSM7-206ENST00000591515 AAR2Q9Y312 384 aaKnown RBP23.17■■□□□ 1.3
LSM7-206ENST00000591515 ANKRD36A6QL64 1941 aa23.16■■□□□ 1.3
LSM7-206ENST00000591515 SLC28A2O43868 658 aa23.16■■□□□ 1.3
LSM7-206ENST00000591515 GEMP55040 296 aa23.16■■□□□ 1.3
LSM7-206ENST00000591515 MPP3Q13368 585 aa23.16■■□□□ 1.3
LSM7-206ENST00000591515 P3H1Q32P28 736 aa23.16■■□□□ 1.3
LSM7-206ENST00000591515 CDCP2Q5VXM1 449 aa23.16■■□□□ 1.3
LSM7-206ENST00000591515 ACTRT1Q8TDG2 376 aa23.16■■□□□ 1.3
LSM7-206ENST00000591515 SNRNP27Q8WVK2 155 aaKnown RBP23.16■■□□□ 1.3
LSM7-206ENST00000591515 C1orf54Q8WWF1 131 aa23.16■■□□□ 1.3
LSM7-206ENST00000591515 ASB12Q8WXK4 309 aa23.16■■□□□ 1.3
LSM7-206ENST00000591515 ATG4AQ8WYN0 398 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms