RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 OMDQ99983 421 aa6.46□□□□□ -1.38
VPS4B-205ENST00000591383 SEMA3CQ99985 751 aa6.46□□□□□ -1.38
VPS4B-205ENST00000591383 DPH2Q9BQC3 489 aaPredicted RBP6.46□□□□□ -1.38
VPS4B-205ENST00000591383 MGME1Q9BQP7 344 aa6.46□□□□□ -1.38
VPS4B-205ENST00000591383 HEPHQ9BQS7 1158 aa6.46□□□□□ -1.38
VPS4B-205ENST00000591383 AARSD1Q9BTE6 412 aaKnown RBP6.46□□□□□ -1.38
VPS4B-205ENST00000591383 BRD8Q9H0E9 1235 aa6.46□□□□□ -1.38
VPS4B-205ENST00000591383 PABPC3Q9H361 631 aaKnown RBP6.46□□□□□ -1.38
VPS4B-205ENST00000591383 ATP13A3Q9H7F0 1226 aa6.46□□□□□ -1.38
VPS4B-205ENST00000591383 RBM22Q9NW64 420 aaKnown RBP eCLIP6.46□□□□□ -1.38
VPS4B-205ENST00000591383 SERGEFQ9UGK8 458 aa6.46□□□□□ -1.38
VPS4B-205ENST00000591383 RSPH14Q9UHP6 348 aa6.46□□□□□ -1.38
VPS4B-205ENST00000591383 FBXO4Q9UKT5 387 aa6.46□□□□□ -1.38
VPS4B-205ENST00000591383 DNPEPQ9ULA0 475 aa6.46□□□□□ -1.38
VPS4B-205ENST00000591383 R4GN57 208 aa6.46□□□□□ -1.38
VPS4B-205ENST00000591383 FANCMQ8IYD8 2048 aa6.45□□□□□ -1.38
VPS4B-205ENST00000591383 MYLKQ15746 1914 aa6.45□□□□□ -1.38
VPS4B-205ENST00000591383 CXorf51AA0A1B0GTR3 108 aa6.45□□□□□ -1.38
VPS4B-205ENST00000591383 MEI4A8MW99 385 aa6.45□□□□□ -1.38
VPS4B-205ENST00000591383 H3BM21 787 aa6.45□□□□□ -1.38
VPS4B-205ENST00000591383 MTSS1O43312 755 aa6.45□□□□□ -1.38
VPS4B-205ENST00000591383 LIASO43766 372 aa6.45□□□□□ -1.38
VPS4B-205ENST00000591383 ZNF821O75541 412 aaPredicted RBP6.45□□□□□ -1.38
VPS4B-205ENST00000591383 CLEC3AO75596 197 aa6.45□□□□□ -1.38
VPS4B-205ENST00000591383 RPP40O75818 363 aaKnown RBP6.45□□□□□ -1.38
VPS4B-205ENST00000591383 PEX11BO96011 259 aa6.45□□□□□ -1.38
VPS4B-205ENST00000591383 CPP00450 1065 aa6.45□□□□□ -1.38
VPS4B-205ENST00000591383 IFNB1P01574 187 aa6.45□□□□□ -1.38
VPS4B-205ENST00000591383 ITGAVP06756 1048 aa6.45□□□□□ -1.38
VPS4B-205ENST00000591383 NID1P14543 1247 aa6.45□□□□□ -1.38
VPS4B-205ENST00000591383 BCKDHBP21953 392 aa6.45□□□□□ -1.38
VPS4B-205ENST00000591383 CA4P22748 312 aa6.45□□□□□ -1.38
VPS4B-205ENST00000591383 ITGB7P26010 798 aa6.45□□□□□ -1.38
VPS4B-205ENST00000591383 PTPN3P26045 913 aa6.45□□□□□ -1.38
VPS4B-205ENST00000591383 RBL1P28749 1068 aa6.45□□□□□ -1.38
VPS4B-205ENST00000591383 SLC8A1P32418 973 aa6.45□□□□□ -1.38
VPS4B-205ENST00000591383 DEKP35659 375 aaKnown RBP6.45□□□□□ -1.38
VPS4B-205ENST00000591383 CD86P42081 329 aa6.45□□□□□ -1.38
VPS4B-205ENST00000591383 TNNT3P45378 269 aaPredicted RBP6.45□□□□□ -1.38
VPS4B-205ENST00000591383 TPMTP51580 245 aa6.45□□□□□ -1.38
VPS4B-205ENST00000591383 PPP2R2AP63151 447 aa6.45□□□□□ -1.38
VPS4B-205ENST00000591383 NFKB2Q00653 900 aa6.45□□□□□ -1.38
VPS4B-205ENST00000591383 BCL2L1Q07817 233 aa6.45□□□□□ -1.38
VPS4B-205ENST00000591383 CNTN1Q12860 1018 aa6.45□□□□□ -1.38
VPS4B-205ENST00000591383 HNRNPDQ14103 355 aaKnown RBP6.45□□□□□ -1.38
VPS4B-205ENST00000591383 LPAL2Q16609 132 aa6.45□□□□□ -1.38
VPS4B-205ENST00000591383 MYLK3Q32MK0 819 aa6.45□□□□□ -1.38
VPS4B-205ENST00000591383 USP39Q53GS9 565 aaKnown RBP6.45□□□□□ -1.38
VPS4B-205ENST00000591383 FAXCQ5TGI0 409 aa6.45□□□□□ -1.38
VPS4B-205ENST00000591383 ITPRIPL1Q6GPH6 555 aa6.45□□□□□ -1.38
VPS4B-205ENST00000591383 GDPD4Q6W3E5 623 aa6.45□□□□□ -1.38
VPS4B-205ENST00000591383 GSTA5Q7RTV2 222 aa6.45□□□□□ -1.38
VPS4B-205ENST00000591383 SRLQ86TD4 932 aa6.45□□□□□ -1.38
VPS4B-205ENST00000591383 LONP2Q86WA8 852 aa6.45□□□□□ -1.38
VPS4B-205ENST00000591383 RASSF3Q86WH2 238 aa6.45□□□□□ -1.38
VPS4B-205ENST00000591383 SCUBE1Q8IWY4 988 aa6.45□□□□□ -1.38
VPS4B-205ENST00000591383 PGBD5Q8N414 524 aa6.45□□□□□ -1.38
VPS4B-205ENST00000591383 HDDC3Q8N4P3 179 aa6.45□□□□□ -1.38
VPS4B-205ENST00000591383 CAMKK1Q8N5S9 505 aa6.45□□□□□ -1.38
VPS4B-205ENST00000591383 AADATQ8N5Z0 425 aa6.45□□□□□ -1.38
VPS4B-205ENST00000591383 CCDC89Q8N998 374 aa6.45□□□□□ -1.38
VPS4B-205ENST00000591383 FAM71DQ8N9W8 422 aa6.45□□□□□ -1.38
VPS4B-205ENST00000591383 LRRN4CLQ8ND94 238 aa6.45□□□□□ -1.38
VPS4B-205ENST00000591383 CCDC110Q8TBZ0 833 aa6.45□□□□□ -1.38
VPS4B-205ENST00000591383 UBE2Q2Q8WVN8 375 aa6.45□□□□□ -1.38
VPS4B-205ENST00000591383 MAML1Q92585 1016 aa6.45□□□□□ -1.38
VPS4B-205ENST00000591383 ARRDC3Q96B67 414 aa6.45□□□□□ -1.38
VPS4B-205ENST00000591383 KLHL32Q96NJ5 620 aa6.45□□□□□ -1.38
VPS4B-205ENST00000591383 TSGA13Q96PP4 275 aa6.45□□□□□ -1.38
VPS4B-205ENST00000591383 TMEM121Q9BTD3 319 aa6.45□□□□□ -1.38
VPS4B-205ENST00000591383 AP1M1Q9BXS5 423 aa6.45□□□□□ -1.38
VPS4B-205ENST00000591383 OSBPL1AQ9BXW6 950 aa6.45□□□□□ -1.38
VPS4B-205ENST00000591383 TMPRSS13Q9BYE2 586 aa6.45□□□□□ -1.38
VPS4B-205ENST00000591383 KLHL25Q9H0H3 589 aa6.45□□□□□ -1.38
VPS4B-205ENST00000591383 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.45□□□□□ -1.38
VPS4B-205ENST00000591383 CD248Q9HCU0 757 aa6.45□□□□□ -1.38
VPS4B-205ENST00000591383 KCND1Q9NSA2 647 aa6.45□□□□□ -1.38
VPS4B-205ENST00000591383 ZSCAN32Q9NX65 697 aa6.45□□□□□ -1.38
VPS4B-205ENST00000591383 FBXL12Q9NXK8 326 aa6.45□□□□□ -1.38
VPS4B-205ENST00000591383 RAPGEFL1Q9UHV5 662 aa6.45□□□□□ -1.38
VPS4B-205ENST00000591383 SARDHQ9UL12 918 aa6.45□□□□□ -1.38
VPS4B-205ENST00000591383 ZNF148Q9UQR1 794 aa6.45□□□□□ -1.38
VPS4B-205ENST00000591383 ITM2BQ9Y287 266 aa6.45□□□□□ -1.38
VPS4B-205ENST00000591383 NCKAP1Q9Y2A7 1128 aa6.45□□□□□ -1.38
VPS4B-205ENST00000591383 TP53BP1Q12888 1972 aaPredicted RBP6.45□□□□□ -1.38
VPS4B-205ENST00000591383 THADAQ6YHU6 1953 aa6.45□□□□□ -1.38
VPS4B-205ENST00000591383 ATXN2Q99700 1313 aaKnown RBP6.45□□□□□ -1.38
VPS4B-205ENST00000591383 CEP192Q8TEP8 1941 aa6.44□□□□□ -1.38
VPS4B-205ENST00000591383 TNRC6BQ9UPQ9 1833 aaKnown RBP6.44□□□□□ -1.38
VPS4B-205ENST00000591383 IGHV1OR15-9A0A0B4J2B8 117 aa6.44□□□□□ -1.38
VPS4B-205ENST00000591383 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.44□□□□□ -1.38
VPS4B-205ENST00000591383 CFAP69A5D8W1 941 aa6.44□□□□□ -1.38
VPS4B-205ENST00000591383 NEMP1O14524 444 aa6.44□□□□□ -1.38
VPS4B-205ENST00000591383 PHF2O75151 1096 aa6.44□□□□□ -1.38
VPS4B-205ENST00000591383 SOCS5O75159 536 aa6.44□□□□□ -1.38
VPS4B-205ENST00000591383 NDUFS2O75306 463 aa6.44□□□□□ -1.38
VPS4B-205ENST00000591383 ZNF217O75362 1048 aa6.44□□□□□ -1.38
VPS4B-205ENST00000591383 PMPCBO75439 489 aa6.44□□□□□ -1.38
VPS4B-205ENST00000591383 ZNF189O75820 626 aaPredicted RBP6.44□□□□□ -1.38
VPS4B-205ENST00000591383 POP4O95707 220 aaKnown RBP6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms