RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 ZW10O43264 779 aa17.33■□□□□ 0.36
RETREG3-210ENST00000590541 AK4P27144 223 aaPredicted RBP17.33■□□□□ 0.36
RETREG3-210ENST00000590541 RFC1P35251 1148 aaPredicted RBP17.33■□□□□ 0.36
RETREG3-210ENST00000590541 TSPAN7P41732 249 aa17.33■□□□□ 0.36
RETREG3-210ENST00000590541 HDAC4P56524 1084 aa17.33■□□□□ 0.36
RETREG3-210ENST00000590541 YBEYP58557 167 aaPredicted RBP17.33■□□□□ 0.36
RETREG3-210ENST00000590541 TPM4P67936 248 aa17.33■□□□□ 0.36
RETREG3-210ENST00000590541 LACTB2Q53H82 288 aaPredicted RBP17.33■□□□□ 0.36
RETREG3-210ENST00000590541 CFAP58Q5T655 872 aa17.33■□□□□ 0.36
RETREG3-210ENST00000590541 DCAF12Q5T6F0 453 aa17.33■□□□□ 0.36
RETREG3-210ENST00000590541 ACAD10Q6JQN1 1059 aa17.33■□□□□ 0.36
RETREG3-210ENST00000590541 PNCKQ6P2M8 343 aa17.33■□□□□ 0.36
RETREG3-210ENST00000590541 WDR59Q6PJI9 974 aa17.33■□□□□ 0.36
RETREG3-210ENST00000590541 IRF2BP2Q7Z5L9 587 aa17.33■□□□□ 0.36
RETREG3-210ENST00000590541 NAGSQ8N159 534 aa17.33■□□□□ 0.36
RETREG3-210ENST00000590541 JOSD2Q8TAC2 188 aa17.33■□□□□ 0.36
RETREG3-210ENST00000590541 FAM172AQ8WUF8 416 aa17.33■□□□□ 0.36
RETREG3-210ENST00000590541 APOBEC4Q8WW27 367 aaKnown RBP17.33■□□□□ 0.36
RETREG3-210ENST00000590541 GSDMCQ9BYG8 508 aa17.33■□□□□ 0.36
RETREG3-210ENST00000590541 SUDS3Q9H7L9 328 aaPredicted RBP17.33■□□□□ 0.36
RETREG3-210ENST00000590541 PDFQ9HBH1 243 aa17.33■□□□□ 0.36
RETREG3-210ENST00000590541 SPTAN1Q13813 2472 aaKnown RBP17.33■□□□□ 0.36
RETREG3-210ENST00000590541 MYO9AB2RTY4 2548 aa17.32■□□□□ 0.36
RETREG3-210ENST00000590541 A0A1B0GTH6 734 aa17.32■□□□□ 0.36
RETREG3-210ENST00000590541 TEX33O43247 280 aa17.32■□□□□ 0.36
RETREG3-210ENST00000590541 ELFN1P0C7U0 828 aa17.32■□□□□ 0.36
RETREG3-210ENST00000590541 TNFAIP3P21580 790 aa17.32■□□□□ 0.36
RETREG3-210ENST00000590541 EPHB2P29323 1055 aa17.32■□□□□ 0.36
RETREG3-210ENST00000590541 RGRP47804 291 aa17.32■□□□□ 0.36
RETREG3-210ENST00000590541 ZNF143P52747 638 aaPredicted RBP17.32■□□□□ 0.36
RETREG3-210ENST00000590541 ILF3Q12906 894 aaKnown RBP eCLIP17.32■□□□□ 0.36
RETREG3-210ENST00000590541 KLRB1Q12918 225 aa17.32■□□□□ 0.36
RETREG3-210ENST00000590541 DEFB109BQ30KR1 87 aa17.32■□□□□ 0.36
RETREG3-210ENST00000590541 AFMIDQ63HM1 303 aa17.32■□□□□ 0.36
RETREG3-210ENST00000590541 DNAJC24Q6P3W2 148 aa17.32■□□□□ 0.36
RETREG3-210ENST00000590541 TIPARPQ7Z3E1 657 aaKnown RBP17.32■□□□□ 0.36
RETREG3-210ENST00000590541 PHLDB2Q86SQ0 1253 aa17.32■□□□□ 0.36
RETREG3-210ENST00000590541 FAM129CQ86XR2 697 aa17.32■□□□□ 0.36
RETREG3-210ENST00000590541 NRSN1Q8IZ57 195 aa17.32■□□□□ 0.36
RETREG3-210ENST00000590541 UNC5BQ8IZJ1 945 aa17.32■□□□□ 0.36
RETREG3-210ENST00000590541 NLGN4XQ8N0W4 816 aa17.32■□□□□ 0.36
RETREG3-210ENST00000590541 NLGN4YQ8NFZ3 816 aaPredicted RBP17.32■□□□□ 0.36
RETREG3-210ENST00000590541 PTCD2Q8WV60 388 aaKnown RBP17.32■□□□□ 0.36
RETREG3-210ENST00000590541 RTP4Q96DX8 246 aa17.32■□□□□ 0.36
RETREG3-210ENST00000590541 TUBGCP5Q96RT8 1024 aa17.32■□□□□ 0.36
RETREG3-210ENST00000590541 AIPL1Q9NZN9 384 aa17.32■□□□□ 0.36
RETREG3-210ENST00000590541 UBA2Q9UBT2 640 aaPredicted RBP17.32■□□□□ 0.36
RETREG3-210ENST00000590541 PLEKHB1Q9UF11 243 aaPredicted RBP17.32■□□□□ 0.36
RETREG3-210ENST00000590541 TP53TG5Q9Y2B4 290 aa17.32■□□□□ 0.36
RETREG3-210ENST00000590541 NOTCH2Q04721 2471 aa17.32■□□□□ 0.36
RETREG3-210ENST00000590541 TCRBV5S1A1TA0A578 114 aa17.31■□□□□ 0.36
RETREG3-210ENST00000590541 K7EM74 188 aa17.31■□□□□ 0.36
RETREG3-210ENST00000590541 PDE2AO00408 941 aaPredicted RBP17.31■□□□□ 0.36
RETREG3-210ENST00000590541 CEACAM5P06731 702 aa17.31■□□□□ 0.36
RETREG3-210ENST00000590541 MYCLP1P12525 358 aaPredicted RBP17.31■□□□□ 0.36
RETREG3-210ENST00000590541 NR1D1P20393 614 aa17.31■□□□□ 0.36
RETREG3-210ENST00000590541 MAP4P27816 1152 aaKnown RBP17.31■□□□□ 0.36
RETREG3-210ENST00000590541 MLLT10P55197 1068 aa17.31■□□□□ 0.36
RETREG3-210ENST00000590541 RAB15P59190 212 aa17.31■□□□□ 0.36
RETREG3-210ENST00000590541 PARP15Q460N3 678 aa17.31■□□□□ 0.36
RETREG3-210ENST00000590541 TMEM71Q6P5X7 295 aa17.31■□□□□ 0.36
RETREG3-210ENST00000590541 DPPA4Q7L190 304 aa17.31■□□□□ 0.36
RETREG3-210ENST00000590541 SLFN11Q7Z7L1 901 aa17.31■□□□□ 0.36
RETREG3-210ENST00000590541 ATCAYQ86WG3 371 aa17.31■□□□□ 0.36
RETREG3-210ENST00000590541 MCOLN2Q8IZK6 566 aa17.31■□□□□ 0.36
RETREG3-210ENST00000590541 KIAA1143Q96AT1 154 aaPredicted RBP17.31■□□□□ 0.36
RETREG3-210ENST00000590541 ECHDC3Q96DC8 303 aa17.31■□□□□ 0.36
RETREG3-210ENST00000590541 TEFMQ96QE5 360 aaKnown RBP17.31■□□□□ 0.36
RETREG3-210ENST00000590541 CNPY3Q9BT09 278 aa17.31■□□□□ 0.36
RETREG3-210ENST00000590541 TRNAU1APQ9NX07 287 aaKnown RBP17.31■□□□□ 0.36
RETREG3-210ENST00000590541 DONSONQ9NYP3 566 aa17.31■□□□□ 0.36
RETREG3-210ENST00000590541 PDP2Q9P2J9 529 aa17.31■□□□□ 0.36
RETREG3-210ENST00000590541 ICE1Q9Y2F5 2266 aa17.31■□□□□ 0.36
RETREG3-210ENST00000590541 WASH4PA8MWX3 477 aa17.3■□□□□ 0.36
RETREG3-210ENST00000590541 J3KR12 359 aa17.3■□□□□ 0.36
RETREG3-210ENST00000590541 SERPINC1P01008 464 aa17.3■□□□□ 0.36
RETREG3-210ENST00000590541 GZMAP12544 262 aa17.3■□□□□ 0.36
RETREG3-210ENST00000590541 BIRC2Q13490 618 aa17.3■□□□□ 0.36
RETREG3-210ENST00000590541 IQCB1Q15051 598 aa17.3■□□□□ 0.36
RETREG3-210ENST00000590541 FIGNQ5HY92 759 aa17.3■□□□□ 0.36
RETREG3-210ENST00000590541 ATP1A1-AS1Q5TC04 95 aa17.3■□□□□ 0.36
RETREG3-210ENST00000590541 DCUN1D2Q6PH85 259 aa17.3■□□□□ 0.36
RETREG3-210ENST00000590541 SLC30A9Q6PML9 568 aa17.3■□□□□ 0.36
RETREG3-210ENST00000590541 UMODL1-AS1Q8N2C9 162 aa17.3■□□□□ 0.36
RETREG3-210ENST00000590541 STARD8Q92502 1023 aa17.3■□□□□ 0.36
RETREG3-210ENST00000590541 CTRCQ99895 268 aa17.3■□□□□ 0.36
RETREG3-210ENST00000590541 DPYSL5Q9BPU6 564 aa17.3■□□□□ 0.36
RETREG3-210ENST00000590541 SYT11Q9BT88 431 aa17.3■□□□□ 0.36
RETREG3-210ENST00000590541 EFHD1Q9BUP0 239 aa17.3■□□□□ 0.36
RETREG3-210ENST00000590541 FRMD8Q9BZ67 464 aaPredicted RBP17.3■□□□□ 0.36
RETREG3-210ENST00000590541 PARVAQ9NVD7 372 aa17.3■□□□□ 0.36
RETREG3-210ENST00000590541 SUFUQ9UMX1 484 aa17.3■□□□□ 0.36
RETREG3-210ENST00000590541 UNC79Q9P2D8 2635 aa17.3■□□□□ 0.36
RETREG3-210ENST00000590541 LRRC53A6NM62 1247 aa17.29■□□□□ 0.36
RETREG3-210ENST00000590541 A8MX80 341 aa17.29■□□□□ 0.36
RETREG3-210ENST00000590541 KRT7P08729 469 aa17.29■□□□□ 0.36
RETREG3-210ENST00000590541 SERPINA4P29622 427 aa17.29■□□□□ 0.36
RETREG3-210ENST00000590541 HTR7P34969 479 aa17.29■□□□□ 0.36
RETREG3-210ENST00000590541 PRKCIP41743 596 aa17.29■□□□□ 0.36
RETREG3-210ENST00000590541 GNPDA1P46926 289 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms