RNA–Protein interactions for RNA: ENST00000589990.1

PRKCSH-210, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-210ENST00000589990 ZNF641Q96N77 438 aaPredicted RBP12.75□□□□□ -0.37
PRKCSH-210ENST00000589990 TEX101Q9BY14 249 aa12.75□□□□□ -0.37
PRKCSH-210ENST00000589990 TRIM55Q9BYV6 548 aa12.75□□□□□ -0.37
PRKCSH-210ENST00000589990 ZMYND15Q9H091 742 aa12.75□□□□□ -0.37
PRKCSH-210ENST00000589990 TRNAU1APQ9NX07 287 aaKnown RBP12.75□□□□□ -0.37
PRKCSH-210ENST00000589990 UBA2Q9UBT2 640 aaPredicted RBP12.75□□□□□ -0.37
PRKCSH-210ENST00000589990 A0A0U1RQS6 177 aa12.74□□□□□ -0.37
PRKCSH-210ENST00000589990 CFAP69A5D8W1 941 aa12.74□□□□□ -0.37
PRKCSH-210ENST00000589990 MKRN2OSH3BPM6 223 aa12.74□□□□□ -0.37
PRKCSH-210ENST00000589990 GADD45BO75293 160 aaPredicted RBP12.74□□□□□ -0.37
PRKCSH-210ENST00000589990 KRT38O76015 456 aa12.74□□□□□ -0.37
PRKCSH-210ENST00000589990 MMEP08473 750 aa12.74□□□□□ -0.37
PRKCSH-210ENST00000589990 EPHB2P29323 1055 aa12.74□□□□□ -0.37
PRKCSH-210ENST00000589990 ACTR1BP42025 376 aa12.74□□□□□ -0.37
PRKCSH-210ENST00000589990 PPM1FP49593 454 aaPredicted RBP12.74□□□□□ -0.37
PRKCSH-210ENST00000589990 ACTR1AP61163 376 aa12.74□□□□□ -0.37
PRKCSH-210ENST00000589990 NOMO3P69849 1222 aa12.74□□□□□ -0.37
PRKCSH-210ENST00000589990 CDK3Q00526 305 aa12.74□□□□□ -0.37
PRKCSH-210ENST00000589990 PAK1Q13153 545 aa12.74□□□□□ -0.37
PRKCSH-210ENST00000589990 MRPL49Q13405 166 aaKnown RBP12.74□□□□□ -0.37
PRKCSH-210ENST00000589990 TSR1Q2NL82 804 aaKnown RBP12.74□□□□□ -0.37
PRKCSH-210ENST00000589990 EIF2S3LQ2VIR3 472 aaKnown RBP12.74□□□□□ -0.37
PRKCSH-210ENST00000589990 NADK2Q4G0N4 442 aa12.74□□□□□ -0.37
PRKCSH-210ENST00000589990 DENND2CQ68D51 928 aa12.74□□□□□ -0.37
PRKCSH-210ENST00000589990 DOK6Q6PKX4 331 aa12.74□□□□□ -0.37
PRKCSH-210ENST00000589990 DPPA4Q7L190 304 aa12.74□□□□□ -0.37
PRKCSH-210ENST00000589990 SRLQ86TD4 932 aa12.74□□□□□ -0.37
PRKCSH-210ENST00000589990 SLC37A2Q8TED4 501 aa12.74□□□□□ -0.37
PRKCSH-210ENST00000589990 FAM172AQ8WUF8 416 aa12.74□□□□□ -0.37
PRKCSH-210ENST00000589990 ECHDC3Q96DC8 303 aa12.74□□□□□ -0.37
PRKCSH-210ENST00000589990 CELF6Q96J87 481 aaKnown RBP12.74□□□□□ -0.37
PRKCSH-210ENST00000589990 FAM81BQ96LP2 452 aa12.74□□□□□ -0.37
PRKCSH-210ENST00000589990 COQ10AQ96MF6 247 aa12.74□□□□□ -0.37
PRKCSH-210ENST00000589990 GBP4Q96PP9 640 aa12.74□□□□□ -0.37
PRKCSH-210ENST00000589990 TEFMQ96QE5 360 aaKnown RBP12.74□□□□□ -0.37
PRKCSH-210ENST00000589990 CASS4Q9NQ75 786 aa12.74□□□□□ -0.37
PRKCSH-210ENST00000589990 B4GALT6Q9UBX8 382 aa12.74□□□□□ -0.37
PRKCSH-210ENST00000589990 KLHL3Q9UH77 587 aa12.74□□□□□ -0.37
PRKCSH-210ENST00000589990 KCTD3Q9Y597 815 aa12.74□□□□□ -0.37
PRKCSH-210ENST00000589990 PCYT1BQ9Y5K3 369 aaPredicted RBP12.74□□□□□ -0.37
PRKCSH-210ENST00000589990 RPS6KL1Q9Y6S9 549 aa12.74□□□□□ -0.37
PRKCSH-210ENST00000589990 C2CD4BA6NLJ0 364 aa12.73□□□□□ -0.37
PRKCSH-210ENST00000589990 MAP3K6O95382 1288 aa12.73□□□□□ -0.37
PRKCSH-210ENST00000589990 TNFAIP3P21580 790 aa12.73□□□□□ -0.37
PRKCSH-210ENST00000589990 SDC4P31431 198 aa12.73□□□□□ -0.37
PRKCSH-210ENST00000589990 DLSTP36957 453 aa12.73□□□□□ -0.37
PRKCSH-210ENST00000589990 ETV3P41162 512 aa12.73□□□□□ -0.37
PRKCSH-210ENST00000589990 CNGA3Q16281 694 aa12.73□□□□□ -0.37
PRKCSH-210ENST00000589990 CEACAM20Q6UY09 585 aa12.73□□□□□ -0.37
PRKCSH-210ENST00000589990 RFLNAQ6ZTI6 216 aa12.73□□□□□ -0.37
PRKCSH-210ENST00000589990 ARCQ7LC44 396 aa12.73□□□□□ -0.37
PRKCSH-210ENST00000589990 HSD11B1LQ7Z5J1 315 aa12.73□□□□□ -0.37
PRKCSH-210ENST00000589990 TRIM74Q86UV6 250 aa12.73□□□□□ -0.37
PRKCSH-210ENST00000589990 FAM114A1Q8IWE2 563 aa12.73□□□□□ -0.37
PRKCSH-210ENST00000589990 EFCAB3Q8N7B9 438 aa12.73□□□□□ -0.37
PRKCSH-210ENST00000589990 SLC20A1Q8WUM9 679 aa12.73□□□□□ -0.37
PRKCSH-210ENST00000589990 CENPIQ92674 756 aaPredicted RBP12.73□□□□□ -0.37
PRKCSH-210ENST00000589990 NUS1Q96E22 293 aa12.73□□□□□ -0.37
PRKCSH-210ENST00000589990 RETREG1Q9H6L5 497 aa12.73□□□□□ -0.37
PRKCSH-210ENST00000589990 FBXO8Q9NRD0 319 aa12.73□□□□□ -0.37
PRKCSH-210ENST00000589990 CROTQ9UKG9 612 aa12.73□□□□□ -0.37
PRKCSH-210ENST00000589990 TMEM98Q9Y2Y6 226 aa12.73□□□□□ -0.37
PRKCSH-210ENST00000589990 FHOD1Q9Y613 1164 aa12.73□□□□□ -0.37
PRKCSH-210ENST00000589990 CDC14CA4D256 554 aa12.72□□□□□ -0.37
PRKCSH-210ENST00000589990 TRAFD1O14545 582 aaPredicted RBP12.72□□□□□ -0.37
PRKCSH-210ENST00000589990 CREB3O43889 395 aa12.72□□□□□ -0.37
PRKCSH-210ENST00000589990 PRAMEF11O60813 436 aa12.72□□□□□ -0.37
PRKCSH-210ENST00000589990 RFPL1O75677 317 aa12.72□□□□□ -0.37
PRKCSH-210ENST00000589990 SERPINA4P29622 427 aa12.72□□□□□ -0.37
PRKCSH-210ENST00000589990 YBEYP58557 167 aaPredicted RBP12.72□□□□□ -0.37
PRKCSH-210ENST00000589990 GPLD1P80108 840 aa12.72□□□□□ -0.37
PRKCSH-210ENST00000589990 MC1RQ01726 317 aa12.72□□□□□ -0.37
PRKCSH-210ENST00000589990 RAPGEF1Q13905 1077 aa12.72□□□□□ -0.37
PRKCSH-210ENST00000589990 CRTC2Q53ET0 693 aaPredicted RBP12.72□□□□□ -0.37
PRKCSH-210ENST00000589990 ARHGAP36Q6ZRI8 547 aa12.72□□□□□ -0.37
PRKCSH-210ENST00000589990 CLEC17AQ6ZS10 378 aa12.72□□□□□ -0.37
PRKCSH-210ENST00000589990 MARK2Q7KZI7 788 aaKnown RBP12.72□□□□□ -0.37
PRKCSH-210ENST00000589990 UMODL1-AS1Q8N2C9 162 aa12.72□□□□□ -0.37
PRKCSH-210ENST00000589990 GALNT6Q8NCL4 622 aa12.72□□□□□ -0.37
PRKCSH-210ENST00000589990 SLC30A5Q8TAD4 765 aa12.72□□□□□ -0.37
PRKCSH-210ENST00000589990 NCSTNQ92542 709 aa12.72□□□□□ -0.37
PRKCSH-210ENST00000589990 TCTN2Q96GX1 697 aa12.72□□□□□ -0.37
PRKCSH-210ENST00000589990 AHCYL2Q96HN2 611 aaKnown RBP12.72□□□□□ -0.37
PRKCSH-210ENST00000589990 TUBGCP5Q96RT8 1024 aa12.72□□□□□ -0.37
PRKCSH-210ENST00000589990 SLC38A3Q99624 504 aa12.72□□□□□ -0.37
PRKCSH-210ENST00000589990 EFHD1Q9BUP0 239 aa12.72□□□□□ -0.37
PRKCSH-210ENST00000589990 LRRC19Q9H756 370 aa12.72□□□□□ -0.37
PRKCSH-210ENST00000589990 ATP13A3Q9H7F0 1226 aa12.72□□□□□ -0.37
PRKCSH-210ENST00000589990 PHPT1Q9NRX4 125 aaPredicted RBP12.72□□□□□ -0.37
PRKCSH-210ENST00000589990 TMEM51Q9NW97 253 aa12.72□□□□□ -0.37
PRKCSH-210ENST00000589990 SIDT1Q9NXL6 827 aaKnown RBP12.72□□□□□ -0.37
PRKCSH-210ENST00000589990 LUZP4Q9P127 313 aa12.72□□□□□ -0.37
PRKCSH-210ENST00000589990 RCOR3Q9P2K3 495 aaPredicted RBP12.72□□□□□ -0.37
PRKCSH-210ENST00000589990 SLC17A4Q9Y2C5 497 aa12.72□□□□□ -0.37
PRKCSH-210ENST00000589990 MAP4K5Q9Y4K4 846 aa12.72□□□□□ -0.37
PRKCSH-210ENST00000589990 OAS3Q9Y6K5 1087 aaKnown RBP12.72□□□□□ -0.37
PRKCSH-210ENST00000589990 APCP25054 2843 aa12.72□□□□□ -0.37
PRKCSH-210ENST00000589990 GOLGA6CA6NDK9 693 aa12.71□□□□□ -0.37
PRKCSH-210ENST00000589990 GOLGA6BA6NDN3 693 aa12.71□□□□□ -0.37
PRKCSH-210ENST00000589990 WASH4PA8MWX3 477 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms