RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 ZNF461Q8TAF7 563 aa19.14■□□□□ 0.65
PRKCSH-209ENST00000589838 PTERQ96BW5 349 aa19.14■□□□□ 0.65
PRKCSH-209ENST00000589838 TRMT2BQ96GJ1 504 aaKnown RBP19.14■□□□□ 0.65
PRKCSH-209ENST00000589838 TDRD1Q9BXT4 1180 aaKnown RBP19.14■□□□□ 0.65
PRKCSH-209ENST00000589838 KLHL4Q9C0H6 718 aa19.14■□□□□ 0.65
PRKCSH-209ENST00000589838 ZDHHC7Q9NXF8 308 aa19.14■□□□□ 0.65
PRKCSH-209ENST00000589838 SCOCQ9UIL1 159 aa19.14■□□□□ 0.65
PRKCSH-209ENST00000589838 PSMD12O00232 456 aaPredicted RBP19.14■□□□□ 0.65
PRKCSH-209ENST00000589838 CFLARO15519 480 aa19.14■□□□□ 0.65
PRKCSH-209ENST00000589838 FGF4P08620 206 aa19.14■□□□□ 0.65
PRKCSH-209ENST00000589838 RAG1P15918 1043 aa19.14■□□□□ 0.65
PRKCSH-209ENST00000589838 RPL17P18621 184 aaKnown RBP19.14■□□□□ 0.65
PRKCSH-209ENST00000589838 KCNC1P48547 511 aa19.14■□□□□ 0.65
PRKCSH-209ENST00000589838 ATP4BP51164 291 aa19.14■□□□□ 0.65
PRKCSH-209ENST00000589838 TIAL1Q01085 375 aaKnown RBP eCLIP19.14■□□□□ 0.65
PRKCSH-209ENST00000589838 RAD51Q06609 339 aa19.14■□□□□ 0.65
PRKCSH-209ENST00000589838 VEPH1Q14D04 833 aa19.14■□□□□ 0.65
PRKCSH-209ENST00000589838 CAPRIN2Q6IMN6 1127 aaKnown RBP19.14■□□□□ 0.65
PRKCSH-209ENST00000589838 HIPK4Q8NE63 616 aa19.14■□□□□ 0.65
PRKCSH-209ENST00000589838 OR4K2Q8NGD2 314 aa19.14■□□□□ 0.65
PRKCSH-209ENST00000589838 STAG3L4Q8TBR4 150 aa19.14■□□□□ 0.65
PRKCSH-209ENST00000589838 PPP2R3CQ969Q6 453 aa19.14■□□□□ 0.65
PRKCSH-209ENST00000589838 IGSF21Q96ID5 467 aa19.14■□□□□ 0.65
PRKCSH-209ENST00000589838 MUC3BQ9H195 1237 aa19.14■□□□□ 0.65
PRKCSH-209ENST00000589838 GPBP1L1Q9HC44 474 aaPredicted RBP19.14■□□□□ 0.65
PRKCSH-209ENST00000589838 C6orf203Q9P0P8 240 aaPredicted RBP19.14■□□□□ 0.65
PRKCSH-209ENST00000589838 PSMD13Q9UNM6 376 aa19.14■□□□□ 0.65
PRKCSH-209ENST00000589838 UBA6A0AVT1 1052 aaPredicted RBP19.13■□□□□ 0.65
PRKCSH-209ENST00000589838 CBX4O00257 560 aa19.13■□□□□ 0.65
PRKCSH-209ENST00000589838 SRP72O76094 671 aaKnown RBP19.13■□□□□ 0.65
PRKCSH-209ENST00000589838 ABLIM3O94929 683 aa19.13■□□□□ 0.65
PRKCSH-209ENST00000589838 LATS1O95835 1130 aa19.13■□□□□ 0.65
PRKCSH-209ENST00000589838 KLKB1P03952 638 aa19.13■□□□□ 0.65
PRKCSH-209ENST00000589838 PYGLP06737 847 aa19.13■□□□□ 0.65
PRKCSH-209ENST00000589838 RGRP47804 291 aa19.13■□□□□ 0.65
PRKCSH-209ENST00000589838 C1QTNF8P60827 252 aa19.13■□□□□ 0.65
PRKCSH-209ENST00000589838 CDC16Q13042 620 aa19.13■□□□□ 0.65
PRKCSH-209ENST00000589838 FLOT2Q14254 428 aa19.13■□□□□ 0.65
PRKCSH-209ENST00000589838 FASTKQ14296 549 aaKnown RBP19.13■□□□□ 0.65
PRKCSH-209ENST00000589838 MMEL1Q495T6 779 aa19.13■□□□□ 0.65
PRKCSH-209ENST00000589838 RNF219Q5W0B1 726 aaPredicted RBP19.13■□□□□ 0.65
PRKCSH-209ENST00000589838 TMEM154Q6P9G4 183 aa19.13■□□□□ 0.65
PRKCSH-209ENST00000589838 RNF168Q8IYW5 571 aaPredicted RBP19.13■□□□□ 0.65
PRKCSH-209ENST00000589838 PTGR2Q8N8N7 351 aaPredicted RBP19.13■□□□□ 0.65
PRKCSH-209ENST00000589838 DLG3Q92796 817 aa19.13■□□□□ 0.65
PRKCSH-209ENST00000589838 KIAA1191Q96A73 305 aa19.13■□□□□ 0.65
PRKCSH-209ENST00000589838 KLF16Q9BXK1 252 aaPredicted RBP19.13■□□□□ 0.65
PRKCSH-209ENST00000589838 DERL2Q9GZP9 239 aa19.13■□□□□ 0.65
PRKCSH-209ENST00000589838 SPO11Q9Y5K1 396 aa19.13■□□□□ 0.65
PRKCSH-209ENST00000589838 RAI2Q9Y5P3 530 aa19.13■□□□□ 0.65
PRKCSH-209ENST00000589838 ACTL7AQ9Y615 435 aa19.13■□□□□ 0.65
PRKCSH-209ENST00000589838 CCDC189A1A4V9 331 aa19.12■□□□□ 0.65
PRKCSH-209ENST00000589838 CASQ2O14958 399 aaPredicted RBP19.12■□□□□ 0.65
PRKCSH-209ENST00000589838 PEX1O43933 1283 aa19.12■□□□□ 0.65
PRKCSH-209ENST00000589838 SEC24AO95486 1093 aa19.12■□□□□ 0.65
PRKCSH-209ENST00000589838 NKAPQ8N5F7 415 aaKnown RBP19.12■□□□□ 0.65
PRKCSH-209ENST00000589838 GDPD5Q8WTR4 605 aa19.12■□□□□ 0.65
PRKCSH-209ENST00000589838 LPGAT1Q92604 370 aa19.12■□□□□ 0.65
PRKCSH-209ENST00000589838 CLSTN3Q9BQT9 956 aa19.12■□□□□ 0.65
PRKCSH-209ENST00000589838 GKN1Q9NS71 199 aa19.12■□□□□ 0.65
PRKCSH-209ENST00000589838 POLR3BQ9NW08 1133 aaPredicted RBP19.12■□□□□ 0.65
PRKCSH-209ENST00000589838 SCN5AQ14524 2016 aa19.12■□□□□ 0.65
PRKCSH-209ENST00000589838 GBF1Q92538 1859 aa19.12■□□□□ 0.65
PRKCSH-209ENST00000589838 TANC1Q9C0D5 1861 aa19.12■□□□□ 0.65
PRKCSH-209ENST00000589838 LCHNA4D1U4 455 aa19.11■□□□□ 0.65
PRKCSH-209ENST00000589838 SYCE1LA8MT33 242 aa19.11■□□□□ 0.65
PRKCSH-209ENST00000589838 PQBP1O60828 265 aaKnown RBP19.11■□□□□ 0.65
PRKCSH-209ENST00000589838 KERAO60938 352 aa19.11■□□□□ 0.65
PRKCSH-209ENST00000589838 FKTNO75072 461 aa19.11■□□□□ 0.65
PRKCSH-209ENST00000589838 PRLP01236 227 aa19.11■□□□□ 0.65
PRKCSH-209ENST00000589838 CD1EP15812 388 aa19.11■□□□□ 0.65
PRKCSH-209ENST00000589838 THOP1P52888 689 aa19.11■□□□□ 0.65
PRKCSH-209ENST00000589838 RPL26P61254 145 aaKnown RBP19.11■□□□□ 0.65
PRKCSH-209ENST00000589838 STX1BP61266 288 aa19.11■□□□□ 0.65
PRKCSH-209ENST00000589838 PDSS2Q86YH6 399 aa19.11■□□□□ 0.65
PRKCSH-209ENST00000589838 TMEM126BQ8IUX1 230 aa19.11■□□□□ 0.65
PRKCSH-209ENST00000589838 LPCAT1Q8NF37 534 aa19.11■□□□□ 0.65
PRKCSH-209ENST00000589838 EXT2Q93063 718 aa19.11■□□□□ 0.65
PRKCSH-209ENST00000589838 SCLYQ96I15 445 aa19.11■□□□□ 0.65
PRKCSH-209ENST00000589838 ATOH8Q96SQ7 321 aa19.11■□□□□ 0.65
PRKCSH-209ENST00000589838 SLC25A23Q9BV35 468 aa19.11■□□□□ 0.65
PRKCSH-209ENST00000589838 HIPK3Q9H422 1215 aa19.11■□□□□ 0.65
PRKCSH-209ENST00000589838 ADAMTS6Q9UKP5 1117 aa19.11■□□□□ 0.65
PRKCSH-209ENST00000589838 TMCO1Q9UM00 188 aa19.11■□□□□ 0.65
PRKCSH-209ENST00000589838 TRIM38O00635 465 aa19.11■□□□□ 0.65
PRKCSH-209ENST00000589838 UBFD1O14562 309 aaKnown RBP19.11■□□□□ 0.65
PRKCSH-209ENST00000589838 TSPAN3O60637 253 aa19.11■□□□□ 0.65
PRKCSH-209ENST00000589838 SNRPB2P08579 225 aaKnown RBP19.11■□□□□ 0.65
PRKCSH-209ENST00000589838 GFAPP14136 432 aa19.11■□□□□ 0.65
PRKCSH-209ENST00000589838 CD9P21926 228 aa19.11■□□□□ 0.65
PRKCSH-209ENST00000589838 FMO4P31512 558 aa19.11■□□□□ 0.65
PRKCSH-209ENST00000589838 TTPAP49638 278 aa19.11■□□□□ 0.65
PRKCSH-209ENST00000589838 ACADVLP49748 655 aa19.11■□□□□ 0.65
PRKCSH-209ENST00000589838 IRX1P78414 480 aaPredicted RBP19.11■□□□□ 0.65
PRKCSH-209ENST00000589838 PTK2BQ14289 1009 aa19.11■□□□□ 0.65
PRKCSH-209ENST00000589838 OR4D1Q15615 310 aa19.11■□□□□ 0.65
PRKCSH-209ENST00000589838 AGKQ53H12 422 aa19.11■□□□□ 0.65
PRKCSH-209ENST00000589838 AARS2Q5JTZ9 985 aaKnown RBP19.11■□□□□ 0.65
PRKCSH-209ENST00000589838 GK5Q6ZS86 529 aa19.11■□□□□ 0.65
PRKCSH-209ENST00000589838 LARP4Q71RC2 724 aaKnown RBP eCLIP19.11■□□□□ 0.652e-12■■■■□ 20.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms