RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 SOCS5O75159 536 aa3.54□□□□□ -1.84
SMAD4-207ENST00000589076 NDUFS3O75489 264 aa3.54□□□□□ -1.84
SMAD4-207ENST00000589076 SLC25A12O75746 678 aa3.54□□□□□ -1.84
SMAD4-207ENST00000589076 OR2C1O95371 312 aa3.54□□□□□ -1.84
SMAD4-207ENST00000589076 CYP1A2P05177 515 aa3.54□□□□□ -1.84
SMAD4-207ENST00000589076 CD58P19256 250 aa3.54□□□□□ -1.84
SMAD4-207ENST00000589076 GPTP24298 496 aa3.54□□□□□ -1.84
SMAD4-207ENST00000589076 HOXA11P31270 313 aaPredicted RBP3.54□□□□□ -1.84
SMAD4-207ENST00000589076 HADHAP40939 763 aa3.54□□□□□ -1.84
SMAD4-207ENST00000589076 COMPP49747 757 aaPredicted RBP3.54□□□□□ -1.84
SMAD4-207ENST00000589076 MC1RQ01726 317 aa3.54□□□□□ -1.84
SMAD4-207ENST00000589076 CEBPZQ03701 1054 aaKnown RBP3.54□□□□□ -1.84
SMAD4-207ENST00000589076 ACVR2BQ13705 512 aa3.54□□□□□ -1.84
SMAD4-207ENST00000589076 NEDD9Q14511 834 aa3.54□□□□□ -1.84
SMAD4-207ENST00000589076 KCTD2Q14681 263 aa3.54□□□□□ -1.84
SMAD4-207ENST00000589076 WTAPQ15007 396 aa3.54□□□□□ -1.84
SMAD4-207ENST00000589076 COL28A1Q2UY09 1125 aa3.54□□□□□ -1.84
SMAD4-207ENST00000589076 USP41Q3LFD5 358 aa3.54□□□□□ -1.84
SMAD4-207ENST00000589076 DUSP28Q4G0W2 176 aa3.54□□□□□ -1.84
SMAD4-207ENST00000589076 CXorf66Q5JRM2 361 aaPredicted RBP3.54□□□□□ -1.84
SMAD4-207ENST00000589076 C6orf141Q5SZD1 244 aa3.54□□□□□ -1.84
SMAD4-207ENST00000589076 PLEKHA7Q6IQ23 1121 aa3.54□□□□□ -1.84
SMAD4-207ENST00000589076 KRTAP5-1Q6L8H4 278 aa3.54□□□□□ -1.84
SMAD4-207ENST00000589076 LCTLQ6UWM7 567 aa3.54□□□□□ -1.84
SMAD4-207ENST00000589076 NOXA1Q86UR1 476 aa3.54□□□□□ -1.84
SMAD4-207ENST00000589076 WDR63Q8IWG1 891 aa3.54□□□□□ -1.84
SMAD4-207ENST00000589076 ADGRF2Q8IZF7 708 aa3.54□□□□□ -1.84
SMAD4-207ENST00000589076 SCCPDHQ8NBX0 429 aa3.54□□□□□ -1.84
SMAD4-207ENST00000589076 C1orf131Q8NDD1 294 aaKnown RBP3.54□□□□□ -1.84
SMAD4-207ENST00000589076 C7orf57Q8NEG2 295 aa3.54□□□□□ -1.84
SMAD4-207ENST00000589076 HUS1BQ8NHY5 278 aa3.54□□□□□ -1.84
SMAD4-207ENST00000589076 SNRNP27Q8WVK2 155 aaKnown RBP3.54□□□□□ -1.84
SMAD4-207ENST00000589076 FAM120BQ96EK7 910 aaKnown RBP3.54□□□□□ -1.84
SMAD4-207ENST00000589076 PGAM5Q96HS1 289 aa3.54□□□□□ -1.84
SMAD4-207ENST00000589076 SLC41A2Q96JW4 573 aa3.54□□□□□ -1.84
SMAD4-207ENST00000589076 KRCC1Q9NPI7 259 aaPredicted RBP3.54□□□□□ -1.84
SMAD4-207ENST00000589076 CYSLTR2Q9NS75 346 aa3.54□□□□□ -1.84
SMAD4-207ENST00000589076 CNOT8Q9UFF9 292 aaKnown RBP3.54□□□□□ -1.84
SMAD4-207ENST00000589076 CEPT1Q9Y6K0 416 aa3.54□□□□□ -1.84
SMAD4-207ENST00000589076 SESN1Q9Y6P5 492 aa3.54□□□□□ -1.84
SMAD4-207ENST00000589076 TAF1P21675 1872 aa3.54□□□□□ -1.84
SMAD4-207ENST00000589076 hCG_1807616A0A1W2PRN6 198 aa3.53□□□□□ -1.84
SMAD4-207ENST00000589076 OR6C75A6NL08 312 aa3.53□□□□□ -1.84
SMAD4-207ENST00000589076 AGAP14A8MT82 685 aa3.53□□□□□ -1.84
SMAD4-207ENST00000589076 A8MZ25 164 aa3.53□□□□□ -1.84
SMAD4-207ENST00000589076 AKR1B15C9JRZ8 316 aaPredicted RBP3.53□□□□□ -1.84
SMAD4-207ENST00000589076 CSH1P0DML2 217 aa3.53□□□□□ -1.84
SMAD4-207ENST00000589076 CSH2P0DML3 217 aa3.53□□□□□ -1.84
SMAD4-207ENST00000589076 PORP16435 677 aaPredicted RBP3.53□□□□□ -1.84
SMAD4-207ENST00000589076 TMEM11P17152 192 aa3.53□□□□□ -1.84
SMAD4-207ENST00000589076 UBA7P41226 1012 aa3.53□□□□□ -1.84
SMAD4-207ENST00000589076 RAD23BP54727 409 aa3.53□□□□□ -1.84
SMAD4-207ENST00000589076 F2RL1P55085 397 aa3.53□□□□□ -1.84
SMAD4-207ENST00000589076 KRTAP10-5P60370 271 aa3.53□□□□□ -1.84
SMAD4-207ENST00000589076 POU3F1Q03052 451 aaPredicted RBP3.53□□□□□ -1.84
SMAD4-207ENST00000589076 EPS8Q12929 822 aa3.53□□□□□ -1.84
SMAD4-207ENST00000589076 CHAF1BQ13112 559 aa3.53□□□□□ -1.84
SMAD4-207ENST00000589076 NAE1Q13564 534 aa3.53□□□□□ -1.84
SMAD4-207ENST00000589076 GPR18Q14330 331 aa3.53□□□□□ -1.84
SMAD4-207ENST00000589076 ADIPOQQ15848 244 aa3.53□□□□□ -1.84
SMAD4-207ENST00000589076 PLEKHS1Q5SXH7 462 aa3.53□□□□□ -1.84
SMAD4-207ENST00000589076 OTUD1Q5VV17 481 aaPredicted RBP3.53□□□□□ -1.84
SMAD4-207ENST00000589076 JADE1Q6IE81 842 aa3.53□□□□□ -1.84
SMAD4-207ENST00000589076 FBXO46Q6PJ61 603 aaPredicted RBP3.53□□□□□ -1.84
SMAD4-207ENST00000589076 GLDNQ6ZMI3 551 aaPredicted RBP3.53□□□□□ -1.84
SMAD4-207ENST00000589076 CHST9Q7L1S5 443 aa3.53□□□□□ -1.84
SMAD4-207ENST00000589076 ZNF367Q7RTV3 350 aa3.53□□□□□ -1.84
SMAD4-207ENST00000589076 ZBTB2Q8N680 514 aa3.53□□□□□ -1.84
SMAD4-207ENST00000589076 AGBL3Q8NEM8 1001 aa3.53□□□□□ -1.84
SMAD4-207ENST00000589076 ARHGEF26Q96DR7 871 aa3.53□□□□□ -1.84
SMAD4-207ENST00000589076 CCDC34Q96HJ3 373 aa3.53□□□□□ -1.84
SMAD4-207ENST00000589076 HARBI1Q96MB7 349 aa3.53□□□□□ -1.84
SMAD4-207ENST00000589076 FAM110AQ9BQ89 295 aa3.53□□□□□ -1.84
SMAD4-207ENST00000589076 TMEM47Q9BQJ4 181 aa3.53□□□□□ -1.84
SMAD4-207ENST00000589076 TKTL2Q9H0I9 626 aa3.53□□□□□ -1.84
SMAD4-207ENST00000589076 PDZD7Q9H5P4 517 aa3.53□□□□□ -1.84
SMAD4-207ENST00000589076 ADD3Q9UEY8 706 aaKnown RBP3.53□□□□□ -1.84
SMAD4-207ENST00000589076 ERVK-11Q9UQG0 969 aa3.53□□□□□ -1.84
SMAD4-207ENST00000589076 TTLL3Q9Y4R7 772 aa3.53□□□□□ -1.84
SMAD4-207ENST00000589076 A0A1B0GVM2 712 aa3.52□□□□□ -1.85
SMAD4-207ENST00000589076 TMEM202A6NGA9 273 aa3.52□□□□□ -1.85
SMAD4-207ENST00000589076 SERINC4A6NH21 518 aa3.52□□□□□ -1.85
SMAD4-207ENST00000589076 KDM4EB2RXH2 506 aaPredicted RBP3.52□□□□□ -1.85
SMAD4-207ENST00000589076 BTBD18B2RXH4 712 aa3.52□□□□□ -1.85
SMAD4-207ENST00000589076 I6L893 689 aaPredicted RBP3.52□□□□□ -1.85
SMAD4-207ENST00000589076 VWA5AO00534 786 aa3.52□□□□□ -1.85
SMAD4-207ENST00000589076 FIBPO43427 364 aa3.52□□□□□ -1.85
SMAD4-207ENST00000589076 HCRTR2O43614 444 aa3.52□□□□□ -1.85
SMAD4-207ENST00000589076 LDB2O43679 373 aa3.52□□□□□ -1.85
SMAD4-207ENST00000589076 ITM2AO43736 263 aa3.52□□□□□ -1.85
SMAD4-207ENST00000589076 NKX2-2O95096 273 aa3.52□□□□□ -1.85
SMAD4-207ENST00000589076 CGAP01215 116 aa3.52□□□□□ -1.85
SMAD4-207ENST00000589076 CENPBP07199 599 aaPredicted RBP3.52□□□□□ -1.85
SMAD4-207ENST00000589076 PRSS2P07478 247 aa3.52□□□□□ -1.85
SMAD4-207ENST00000589076 IL7RP16871 459 aa3.52□□□□□ -1.85
SMAD4-207ENST00000589076 NAGAP17050 411 aa3.52□□□□□ -1.85
SMAD4-207ENST00000589076 DDX5P17844 614 aaKnown RBP3.52□□□□□ -1.85
SMAD4-207ENST00000589076 MCM3P25205 808 aa3.52□□□□□ -1.85
SMAD4-207ENST00000589076 HOXA13P31271 388 aaPredicted RBP3.52□□□□□ -1.85
SMAD4-207ENST00000589076 CDH8P55286 799 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms