RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 SGF29Q96ES7 293 aa13.7□□□□□ -0.22
HDAC5-208ENST00000588419 DTD2Q96FN9 168 aa13.7□□□□□ -0.22
HDAC5-208ENST00000588419 ZNF599Q96NL3 588 aa13.7□□□□□ -0.22
HDAC5-208ENST00000588419 NUDCD1Q96RS6 583 aa13.7□□□□□ -0.22
HDAC5-208ENST00000588419 NUDT22Q9BRQ3 303 aa13.7□□□□□ -0.22
HDAC5-208ENST00000588419 FAM117AQ9C073 453 aa13.7□□□□□ -0.22
HDAC5-208ENST00000588419 NAT10Q9H0A0 1025 aaKnown RBP13.7□□□□□ -0.22
HDAC5-208ENST00000588419 NOD2Q9HC29 1040 aa13.7□□□□□ -0.22
HDAC5-208ENST00000588419 NT5MQ9NPB1 228 aa13.7□□□□□ -0.22
HDAC5-208ENST00000588419 TAAR2Q9P1P5 351 aa13.7□□□□□ -0.22
HDAC5-208ENST00000588419 MYO6Q9UM54 1294 aa13.7□□□□□ -0.22
HDAC5-208ENST00000588419 SSUH2Q9Y2M2 353 aa13.7□□□□□ -0.22
HDAC5-208ENST00000588419 TTLL3Q9Y4R7 772 aa13.7□□□□□ -0.22
HDAC5-208ENST00000588419 PCDHB11Q9Y5F2 797 aa13.7□□□□□ -0.22
HDAC5-208ENST00000588419 LRRC10BA6NIK2 292 aa13.69□□□□□ -0.22
HDAC5-208ENST00000588419 HOXC4P09017 264 aaPredicted RBP13.69□□□□□ -0.22
HDAC5-208ENST00000588419 PNLIPP16233 465 aa13.69□□□□□ -0.22
HDAC5-208ENST00000588419 TRIM23P36406 574 aa13.69□□□□□ -0.22
HDAC5-208ENST00000588419 HSPA9P38646 679 aaKnown RBP13.69□□□□□ -0.22
HDAC5-208ENST00000588419 MMP13P45452 471 aa13.69□□□□□ -0.22
HDAC5-208ENST00000588419 GPR1P46091 355 aa13.69□□□□□ -0.22
HDAC5-208ENST00000588419 ZNF135P52742 658 aaPredicted RBP13.69□□□□□ -0.22
HDAC5-208ENST00000588419 NFKB2Q00653 900 aa13.69□□□□□ -0.22
HDAC5-208ENST00000588419 ZFP36L1Q07352 338 aaKnown RBP13.69□□□□□ -0.22
HDAC5-208ENST00000588419 ARMC12Q5T9G4 340 aa13.69□□□□□ -0.22
HDAC5-208ENST00000588419 Q6ZVL8 140 aa13.69□□□□□ -0.22
HDAC5-208ENST00000588419 USP45Q70EL2 814 aa13.69□□□□□ -0.22
HDAC5-208ENST00000588419 TRIM74Q86UV6 250 aa13.69□□□□□ -0.22
HDAC5-208ENST00000588419 NRROSQ86YC3 692 aa13.69□□□□□ -0.22
HDAC5-208ENST00000588419 PSTKQ8IV42 348 aaKnown RBP13.69□□□□□ -0.22
HDAC5-208ENST00000588419 SLITRK4Q8IW52 837 aa13.69□□□□□ -0.22
HDAC5-208ENST00000588419 ZSCAN1Q8NBB4 408 aa13.69□□□□□ -0.22
HDAC5-208ENST00000588419 TRIM11Q96F44 468 aa13.69□□□□□ -0.22
HDAC5-208ENST00000588419 BTBD6Q96KE9 485 aa13.69□□□□□ -0.22
HDAC5-208ENST00000588419 CCDC74BQ96LY2 380 aa13.69□□□□□ -0.22
HDAC5-208ENST00000588419 CSPG4P5Q96PW8 444 aa13.69□□□□□ -0.22
HDAC5-208ENST00000588419 MGME1Q9BQP7 344 aa13.69□□□□□ -0.22
HDAC5-208ENST00000588419 MRPL47Q9HD33 250 aaKnown RBP13.69□□□□□ -0.22
HDAC5-208ENST00000588419 RTN4Q9NQC3 1192 aaKnown RBP13.69□□□□□ -0.22
HDAC5-208ENST00000588419 PHTF1Q9UMS5 762 aa13.69□□□□□ -0.22
HDAC5-208ENST00000588419 ZNF106Q9H2Y7 1883 aaKnown RBP13.69□□□□□ -0.22
HDAC5-208ENST00000588419 A0A1W2PQ67 120 aa13.68□□□□□ -0.22
HDAC5-208ENST00000588419 C9orf172C9J069 976 aa13.68□□□□□ -0.22
HDAC5-208ENST00000588419 NVLO15381 856 aaKnown RBP13.68□□□□□ -0.22
HDAC5-208ENST00000588419 HTRA2O43464 458 aaPredicted RBP13.68□□□□□ -0.22
HDAC5-208ENST00000588419 B4GAT1O43505 415 aa13.68□□□□□ -0.22
HDAC5-208ENST00000588419 CPNE6O95741 557 aa13.68□□□□□ -0.22
HDAC5-208ENST00000588419 FGF1P05230 155 aa13.68□□□□□ -0.22
HDAC5-208ENST00000588419 CEACAM5P06731 702 aa13.68□□□□□ -0.22
HDAC5-208ENST00000588419 MYBL1P10243 752 aa13.68□□□□□ -0.22
HDAC5-208ENST00000588419 CCL4P13236 92 aa13.68□□□□□ -0.22
HDAC5-208ENST00000588419 MPSTP25325 297 aa13.68□□□□□ -0.22
HDAC5-208ENST00000588419 SERPINB6P35237 376 aa13.68□□□□□ -0.22
HDAC5-208ENST00000588419 ACTR1BP42025 376 aa13.68□□□□□ -0.22
HDAC5-208ENST00000588419 HCAR3P49019 387 aa13.68□□□□□ -0.22
HDAC5-208ENST00000588419 EPHB1P54762 984 aa13.68□□□□□ -0.22
HDAC5-208ENST00000588419 ACTR1AP61163 376 aa13.68□□□□□ -0.22
HDAC5-208ENST00000588419 CYP4F2P78329 520 aa13.68□□□□□ -0.22
HDAC5-208ENST00000588419 B4GALNT1Q00973 533 aa13.68□□□□□ -0.22
HDAC5-208ENST00000588419 CTBSQ01459 385 aa13.68□□□□□ -0.22
HDAC5-208ENST00000588419 DPYSL2Q16555 572 aa13.68□□□□□ -0.22
HDAC5-208ENST00000588419 TMEM164Q5U3C3 297 aa13.68□□□□□ -0.22
HDAC5-208ENST00000588419 MARC1Q5VT66 337 aa13.68□□□□□ -0.22
HDAC5-208ENST00000588419 NKAIN2Q5VXU1 208 aa13.68□□□□□ -0.22
HDAC5-208ENST00000588419 TXNRD3NBQ6F5E7 133 aa13.68□□□□□ -0.22
HDAC5-208ENST00000588419 POLNQ7Z5Q5 900 aa13.68□□□□□ -0.22
HDAC5-208ENST00000588419 ZNF761Q86XN6 746 aaPredicted RBP13.68□□□□□ -0.22
HDAC5-208ENST00000588419 GPBAR1Q8TDU6 330 aa13.68□□□□□ -0.22
HDAC5-208ENST00000588419 TMEM159Q96B96 161 aa13.68□□□□□ -0.22
HDAC5-208ENST00000588419 SMIM14Q96QK8 99 aa13.68□□□□□ -0.22
HDAC5-208ENST00000588419 TEX101Q9BY14 249 aa13.68□□□□□ -0.22
HDAC5-208ENST00000588419 FRMD8Q9BZ67 464 aaPredicted RBP13.68□□□□□ -0.22
HDAC5-208ENST00000588419 CDH19Q9H159 772 aa13.68□□□□□ -0.22
HDAC5-208ENST00000588419 ANAPC7Q9UJX3 599 aa13.68□□□□□ -0.22
HDAC5-208ENST00000588419 TMEM98Q9Y2Y6 226 aa13.68□□□□□ -0.22
HDAC5-208ENST00000588419 PLEKHM1Q9Y4G2 1056 aa13.68□□□□□ -0.22
HDAC5-208ENST00000588419 PCDHGA4Q9Y5G9 962 aa13.68□□□□□ -0.22
HDAC5-208ENST00000588419 TRBV23OR9-2A0A075B6M9 112 aa13.67□□□□□ -0.22
HDAC5-208ENST00000588419 SMTNL1A8MU46 457 aa13.67□□□□□ -0.22
HDAC5-208ENST00000588419 INPP4BO15327 924 aa13.67□□□□□ -0.22
HDAC5-208ENST00000588419 ZW10O43264 779 aa13.67□□□□□ -0.22
HDAC5-208ENST00000588419 MAFKO60675 156 aa13.67□□□□□ -0.22
HDAC5-208ENST00000588419 PGLSO95336 258 aa13.67□□□□□ -0.22
HDAC5-208ENST00000588419 MAP3K6O95382 1288 aa13.67□□□□□ -0.22
HDAC5-208ENST00000588419 ASMTLO95671 621 aa13.67□□□□□ -0.22
HDAC5-208ENST00000588419 MBD3O95983 291 aa13.67□□□□□ -0.22
HDAC5-208ENST00000588419 PEX11BO96011 259 aa13.67□□□□□ -0.22
HDAC5-208ENST00000588419 FUCA1P04066 466 aa13.67□□□□□ -0.22
HDAC5-208ENST00000588419 FAM87AP0C7U9 286 aa13.67□□□□□ -0.22
HDAC5-208ENST00000588419 RARAP10276 462 aa13.67□□□□□ -0.22
HDAC5-208ENST00000588419 GZMAP12544 262 aa13.67□□□□□ -0.22
HDAC5-208ENST00000588419 CR2P20023 1033 aa13.67□□□□□ -0.22
HDAC5-208ENST00000588419 PCK1P35558 622 aa13.67□□□□□ -0.22
HDAC5-208ENST00000588419 CDH6P55285 790 aa13.67□□□□□ -0.22
HDAC5-208ENST00000588419 LINC00303Q3SY05 128 aa13.67□□□□□ -0.22
HDAC5-208ENST00000588419 LRRC66Q68CR7 880 aa13.67□□□□□ -0.22
HDAC5-208ENST00000588419 RFLNAQ6ZTI6 216 aa13.67□□□□□ -0.22
HDAC5-208ENST00000588419 EXD3Q8N9H8 876 aa13.67□□□□□ -0.22
HDAC5-208ENST00000588419 PMEPA1Q969W9 287 aa13.67□□□□□ -0.22
HDAC5-208ENST00000588419 AP2M1Q96CW1 435 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 112.2 ms