RNA–Protein interactions for RNA: ENST00000586796.1

RETREG3-204, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-204ENST00000586796 COILP38432 576 aaPredicted RBP21.42■■□□□ 1.02
RETREG3-204ENST00000586796 MTM1Q13496 603 aa21.42■■□□□ 1.02
RETREG3-204ENST00000586796 ZNF542PQ5EBM4 170 aa21.42■■□□□ 1.02
RETREG3-204ENST00000586796 PNCKQ6P2M8 343 aa21.42■■□□□ 1.02
RETREG3-204ENST00000586796 RANBP10Q6VN20 620 aa21.42■■□□□ 1.02
RETREG3-204ENST00000586796 ATL2Q8NHH9 583 aa21.42■■□□□ 1.02
RETREG3-204ENST00000586796 SCAMP4Q969E2 229 aa21.42■■□□□ 1.02
RETREG3-204ENST00000586796 AP2M1Q96CW1 435 aa21.42■■□□□ 1.02
RETREG3-204ENST00000586796 EID2BQ96D98 161 aa21.42■■□□□ 1.02
RETREG3-204ENST00000586796 ELF4Q99607 663 aaPredicted RBP21.42■■□□□ 1.02
RETREG3-204ENST00000586796 APOOQ9BUR5 198 aa21.42■■□□□ 1.02
RETREG3-204ENST00000586796 ABCG8Q9H221 673 aa21.42■■□□□ 1.02
RETREG3-204ENST00000586796 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.42■■□□□ 1.02
RETREG3-204ENST00000586796 PI4KAP42356 2102 aa21.41■■□□□ 1.02
RETREG3-204ENST00000586796 PSMD3O43242 534 aa21.41■■□□□ 1.02
RETREG3-204ENST00000586796 PHF2O75151 1096 aa21.41■■□□□ 1.02
RETREG3-204ENST00000586796 FDFT1P37268 417 aa21.41■■□□□ 1.02
RETREG3-204ENST00000586796 TERF1P54274 439 aa21.41■■□□□ 1.02
RETREG3-204ENST00000586796 ZNF423Q2M1K9 1284 aa21.41■■□□□ 1.02
RETREG3-204ENST00000586796 ALS2CLQ60I27 953 aa21.41■■□□□ 1.02
RETREG3-204ENST00000586796 KCTD11Q693B1 232 aa21.41■■□□□ 1.02
RETREG3-204ENST00000586796 RAET1GQ6H3X3 334 aa21.41■■□□□ 1.02
RETREG3-204ENST00000586796 ESRP1Q6NXG1 681 aaKnown RBP21.41■■□□□ 1.02
RETREG3-204ENST00000586796 CCDC137Q6PK04 289 aaKnown RBP21.41■■□□□ 1.02
RETREG3-204ENST00000586796 GLT6D1Q7Z4J2 308 aa21.41■■□□□ 1.02
RETREG3-204ENST00000586796 TMC3Q7Z5M5 1100 aa21.41■■□□□ 1.02
RETREG3-204ENST00000586796 DCP2Q8IU60 420 aaKnown RBP21.41■■□□□ 1.02
RETREG3-204ENST00000586796 CREG2Q8IUH2 290 aa21.41■■□□□ 1.02
RETREG3-204ENST00000586796 C16orf45Q96MC5 204 aaPredicted RBP21.41■■□□□ 1.02
RETREG3-204ENST00000586796 SRPK1Q96SB4 655 aaKnown RBP21.41■■□□□ 1.02
RETREG3-204ENST00000586796 RIOK2Q9BVS4 552 aaKnown RBP21.41■■□□□ 1.02
RETREG3-204ENST00000586796 CAAP1Q9H8G2 361 aa21.41■■□□□ 1.02
RETREG3-204ENST00000586796 LRRC40Q9H9A6 602 aa21.41■■□□□ 1.02
RETREG3-204ENST00000586796 BPIFA1Q9NP55 256 aa21.41■■□□□ 1.02
RETREG3-204ENST00000586796 TM7SF3Q9NS93 570 aa21.41■■□□□ 1.02
RETREG3-204ENST00000586796 DNAAF2Q9NVR5 837 aaKnown RBP21.41■■□□□ 1.02
RETREG3-204ENST00000586796 KCTD5Q9NXV2 234 aa21.41■■□□□ 1.02
RETREG3-204ENST00000586796 BUD23O43709 281 aaKnown RBP21.4■■□□□ 1.02
RETREG3-204ENST00000586796 AP2A1O95782 977 aa21.4■■□□□ 1.02
RETREG3-204ENST00000586796 GPR1P46091 355 aa21.4■■□□□ 1.02
RETREG3-204ENST00000586796 SPINT3P49223 89 aa21.4■■□□□ 1.02
RETREG3-204ENST00000586796 VPS41P49754 854 aa21.4■■□□□ 1.02
RETREG3-204ENST00000586796 YPEL5P62699 121 aa21.4■■□□□ 1.02
RETREG3-204ENST00000586796 PTK2BQ14289 1009 aa21.4■■□□□ 1.02
RETREG3-204ENST00000586796 FZD2Q14332 565 aa21.4■■□□□ 1.02
RETREG3-204ENST00000586796 CYP1B1Q16678 543 aa21.4■■□□□ 1.02
RETREG3-204ENST00000586796 HS1BP3Q53T59 392 aa21.4■■□□□ 1.02
RETREG3-204ENST00000586796 AGAP2Q99490 1192 aa21.4■■□□□ 1.02
RETREG3-204ENST00000586796 ERVMER34-1Q9H9K5 563 aa21.4■■□□□ 1.02
RETREG3-204ENST00000586796 PIH1D1Q9NWS0 290 aaKnown RBP21.4■■□□□ 1.02
RETREG3-204ENST00000586796 DNAJC28Q9NX36 388 aa21.4■■□□□ 1.02
RETREG3-204ENST00000586796 RIF1Q5UIP0 2472 aaKnown RBP21.4■■□□□ 1.02
RETREG3-204ENST00000586796 FAM186AA6NE01 2351 aa21.39■■□□□ 1.02
RETREG3-204ENST00000586796 SPTY2D1-AS1A0A0U1RR47 76 aa21.39■■□□□ 1.01
RETREG3-204ENST00000586796 A0A1B0GTQ1 180 aa21.39■■□□□ 1.01
RETREG3-204ENST00000586796 KRT14P02533 472 aa21.39■■□□□ 1.01
RETREG3-204ENST00000586796 TSHRP16473 764 aa21.39■■□□□ 1.01
RETREG3-204ENST00000586796 TPH1P17752 444 aa21.39■■□□□ 1.01
RETREG3-204ENST00000586796 PAFAH1B1P43034 410 aa21.39■■□□□ 1.01
RETREG3-204ENST00000586796 ARRB1P49407 418 aaPredicted RBP21.39■■□□□ 1.01
RETREG3-204ENST00000586796 CCT8P50990 548 aa21.39■■□□□ 1.01
RETREG3-204ENST00000586796 LIMK1P53667 647 aa21.39■■□□□ 1.01
RETREG3-204ENST00000586796 BASP1P80723 227 aaKnown RBP21.39■■□□□ 1.01
RETREG3-204ENST00000586796 ENPP7Q6UWV6 458 aa21.39■■□□□ 1.01
RETREG3-204ENST00000586796 KLHDC8BQ8IXV7 354 aa21.39■■□□□ 1.01
RETREG3-204ENST00000586796 NRSN1Q8IZ57 195 aa21.39■■□□□ 1.01
RETREG3-204ENST00000586796 FUBP1Q96AE4 644 aaKnown RBP21.39■■□□□ 1.01
RETREG3-204ENST00000586796 FAM83DQ9H4H8 585 aa21.39■■□□□ 1.01
RETREG3-204ENST00000586796 TRABDQ9H4I3 376 aa21.39■■□□□ 1.01
RETREG3-204ENST00000586796 WDR26Q9H7D7 661 aa21.39■■□□□ 1.01
RETREG3-204ENST00000586796 GPR27Q9NS67 375 aa21.39■■□□□ 1.01
RETREG3-204ENST00000586796 HACD3Q9P035 362 aa21.39■■□□□ 1.01
RETREG3-204ENST00000586796 WDR87Q6ZQQ6 2873 aa21.39■■□□□ 1.01
RETREG3-204ENST00000586796 CACNB4O00305 520 aaPredicted RBP21.38■■□□□ 1.01
RETREG3-204ENST00000586796 TOR1BO14657 336 aa21.38■■□□□ 1.01
RETREG3-204ENST00000586796 DFNA5O60443 496 aa21.38■■□□□ 1.01
RETREG3-204ENST00000586796 SDC3O75056 442 aa21.38■■□□□ 1.01
RETREG3-204ENST00000586796 APRTP07741 180 aa21.38■■□□□ 1.01
RETREG3-204ENST00000586796 HTR1BP28222 390 aa21.38■■□□□ 1.01
RETREG3-204ENST00000586796 BNIP3Q12983 259 aa21.38■■□□□ 1.01
RETREG3-204ENST00000586796 NFATC4Q14934 902 aa21.38■■□□□ 1.01
RETREG3-204ENST00000586796 SHBQ15464 509 aa21.38■■□□□ 1.01
RETREG3-204ENST00000586796 DENND5AQ6IQ26 1287 aa21.38■■□□□ 1.01
RETREG3-204ENST00000586796 PPP1R21Q6ZMI0 780 aa21.38■■□□□ 1.01
RETREG3-204ENST00000586796 NYAP1Q6ZVC0 841 aa21.38■■□□□ 1.01
RETREG3-204ENST00000586796 ZNF765Q7L2R6 523 aa21.38■■□□□ 1.01
RETREG3-204ENST00000586796 PARGQ86W56 976 aa21.38■■□□□ 1.01
RETREG3-204ENST00000586796 HEATR4Q86WZ0 1026 aa21.38■■□□□ 1.01
RETREG3-204ENST00000586796 GATAD2AQ86YP4 633 aa21.38■■□□□ 1.01
RETREG3-204ENST00000586796 TTC30BQ8N4P2 665 aa21.38■■□□□ 1.01
RETREG3-204ENST00000586796 OXR1Q8N573 874 aa21.38■■□□□ 1.01
RETREG3-204ENST00000586796 GPR26Q8NDV2 337 aa21.38■■□□□ 1.01
RETREG3-204ENST00000586796 LGR4Q9BXB1 951 aa21.38■■□□□ 1.01
RETREG3-204ENST00000586796 DDX47Q9H0S4 455 aaKnown RBP21.38■■□□□ 1.01
RETREG3-204ENST00000586796 ARL5AQ9Y689 179 aa21.38■■□□□ 1.01
RETREG3-204ENST00000586796 TMEM131Q92545 1883 aa21.37■■□□□ 1.01
RETREG3-204ENST00000586796 PTPRZ1P23471 2315 aaPredicted RBP21.37■■□□□ 1.01
RETREG3-204ENST00000586796 LAMA1P25391 3075 aa21.37■■□□□ 1.01
RETREG3-204ENST00000586796 PDE2AO00408 941 aaPredicted RBP21.37■■□□□ 1.01
RETREG3-204ENST00000586796 SLC30A4O14863 429 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms