RNA–Protein interactions for RNA: ENST00000586792.5

ZNF540-204, Transcript of zinc finger protein 540, humanhuman

TSL 3 BASIC

Gene ZNF540, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-204ENST00000586792 CGRRF1Q99675 332 aa4.88□□□□□ -1.63
ZNF540-204ENST00000586792 BAG1Q99933 345 aaPredicted RBP4.88□□□□□ -1.63
ZNF540-204ENST00000586792 CPNE5Q9HCH3 593 aa4.88□□□□□ -1.63
ZNF540-204ENST00000586792 INTS13Q9NVM9 706 aa4.88□□□□□ -1.63
ZNF540-204ENST00000586792 MKS1Q9NXB0 559 aa4.88□□□□□ -1.63
ZNF540-204ENST00000586792 DDX43Q9NXZ2 648 aaKnown RBP4.88□□□□□ -1.63
ZNF540-204ENST00000586792 CHMP5Q9NZZ3 219 aa4.88□□□□□ -1.63
ZNF540-204ENST00000586792 YIPF1Q9Y548 306 aa4.88□□□□□ -1.63
ZNF540-204ENST00000586792 SNX9Q9Y5X1 595 aa4.88□□□□□ -1.63
ZNF540-204ENST00000586792 MTCL1Q9Y4B5 1905 aaKnown RBP4.87□□□□□ -1.63
ZNF540-204ENST00000586792 SPTBN5Q9NRC6 3674 aaKnown RBP4.87□□□□□ -1.63
ZNF540-204ENST00000586792 A0A1B0GTW7 788 aa4.87□□□□□ -1.63
ZNF540-204ENST00000586792 MTMR11A4FU01 709 aa4.87□□□□□ -1.63
ZNF540-204ENST00000586792 TMEM221A6NGB7 291 aa4.87□□□□□ -1.63
ZNF540-204ENST00000586792 M0R296 226 aa4.87□□□□□ -1.63
ZNF540-204ENST00000586792 FOXN3O00409 490 aaPredicted RBP4.87□□□□□ -1.63
ZNF540-204ENST00000586792 PSMA7O14818 248 aa4.87□□□□□ -1.63
ZNF540-204ENST00000586792 PPEF2O14830 753 aa4.87□□□□□ -1.63
ZNF540-204ENST00000586792 TGFB1I1O43294 461 aa4.87□□□□□ -1.63
ZNF540-204ENST00000586792 KIF1CO43896 1103 aaKnown RBP4.87□□□□□ -1.63
ZNF540-204ENST00000586792 PEX1O43933 1283 aa4.87□□□□□ -1.63
ZNF540-204ENST00000586792 STX10O60499 249 aa4.87□□□□□ -1.63
ZNF540-204ENST00000586792 NR3C1P04150 777 aa4.87□□□□□ -1.63
ZNF540-204ENST00000586792 HRGP04196 525 aa4.87□□□□□ -1.63
ZNF540-204ENST00000586792 RHOP08100 348 aa4.87□□□□□ -1.63
ZNF540-204ENST00000586792 OR4Q2P0C623 313 aa4.87□□□□□ -1.63
ZNF540-204ENST00000586792 CCDC159P0C7I6 412 aa4.87□□□□□ -1.63
ZNF540-204ENST00000586792 EPB41P11171 864 aaKnown RBP4.87□□□□□ -1.63
ZNF540-204ENST00000586792 MYL4P12829 197 aa4.87□□□□□ -1.63
ZNF540-204ENST00000586792 LAMP2P13473 410 aa4.87□□□□□ -1.63
ZNF540-204ENST00000586792 ANXA13P27216 316 aa4.87□□□□□ -1.63
ZNF540-204ENST00000586792 HPDP32754 393 aaPredicted RBP4.87□□□□□ -1.63
ZNF540-204ENST00000586792 PSMC2P35998 433 aaKnown RBP4.87□□□□□ -1.63
ZNF540-204ENST00000586792 CLRN1P58418 232 aa4.87□□□□□ -1.63
ZNF540-204ENST00000586792 RPL10AP62906 217 aaKnown RBP4.87□□□□□ -1.63
ZNF540-204ENST00000586792 TUBA4AP68366 448 aa4.87□□□□□ -1.63
ZNF540-204ENST00000586792 CYP24A1Q07973 514 aa4.87□□□□□ -1.63
ZNF540-204ENST00000586792 STK4Q13043 487 aa4.87□□□□□ -1.63
ZNF540-204ENST00000586792 PNOCQ13519 176 aa4.87□□□□□ -1.63
ZNF540-204ENST00000586792 KCNB1Q14721 858 aa4.87□□□□□ -1.63
ZNF540-204ENST00000586792 PCBP2Q15366 365 aaKnown RBP eCLIP4.87□□□□□ -1.63
ZNF540-204ENST00000586792 ZNF699Q32M78 642 aa4.87□□□□□ -1.63
ZNF540-204ENST00000586792 HSP90B2PQ58FF3 399 aa4.87□□□□□ -1.63
ZNF540-204ENST00000586792 SLC45A4Q5BKX6 768 aa4.87□□□□□ -1.63
ZNF540-204ENST00000586792 ZNF667Q5HYK9 610 aa4.87□□□□□ -1.63
ZNF540-204ENST00000586792 DGKKQ5KSL6 1271 aa4.87□□□□□ -1.63
ZNF540-204ENST00000586792 WSCD1Q658N2 575 aa4.87□□□□□ -1.63
ZNF540-204ENST00000586792 INTS8Q75QN2 995 aaKnown RBP4.87□□□□□ -1.63
ZNF540-204ENST00000586792 TRAPPC11Q7Z392 1133 aa4.87□□□□□ -1.63
ZNF540-204ENST00000586792 C12orf56Q8IXR9 622 aa4.87□□□□□ -1.63
ZNF540-204ENST00000586792 YAF2Q8IY57 180 aa4.87□□□□□ -1.63
ZNF540-204ENST00000586792 GUF1Q8N442 669 aaKnown RBP4.87□□□□□ -1.63
ZNF540-204ENST00000586792 LNX2Q8N448 690 aa4.87□□□□□ -1.63
ZNF540-204ENST00000586792 PCYOX1LQ8NBM8 494 aa4.87□□□□□ -1.63
ZNF540-204ENST00000586792 KIAA0895Q8NCT3 520 aa4.87□□□□□ -1.63
ZNF540-204ENST00000586792 MNS1Q8NEH6 495 aa4.87□□□□□ -1.63
ZNF540-204ENST00000586792 SLC30A5Q8TAD4 765 aa4.87□□□□□ -1.63
ZNF540-204ENST00000586792 MDM1Q8TC05 714 aa4.87□□□□□ -1.63
ZNF540-204ENST00000586792 ING5Q8WYH8 240 aa4.87□□□□□ -1.63
ZNF540-204ENST00000586792 ZNF707Q96C28 371 aaPredicted RBP4.87□□□□□ -1.63
ZNF540-204ENST00000586792 FAXDC2Q96IV6 333 aa4.87□□□□□ -1.63
ZNF540-204ENST00000586792 GSDMAQ96QA5 445 aa4.87□□□□□ -1.63
ZNF540-204ENST00000586792 TAAR9Q96RI9 348 aa4.87□□□□□ -1.63
ZNF540-204ENST00000586792 TBCBQ99426 244 aa4.87□□□□□ -1.63
ZNF540-204ENST00000586792 PAIP2Q9BPZ3 127 aaKnown RBP4.87□□□□□ -1.63
ZNF540-204ENST00000586792 WACQ9BTA9 647 aa4.87□□□□□ -1.63
ZNF540-204ENST00000586792 GPR88Q9GZN0 384 aa4.87□□□□□ -1.63
ZNF540-204ENST00000586792 ZCWPW1Q9H0M4 648 aa4.87□□□□□ -1.63
ZNF540-204ENST00000586792 CCDC68Q9H2F9 335 aa4.87□□□□□ -1.63
ZNF540-204ENST00000586792 SNX25Q9H3E2 840 aa4.87□□□□□ -1.63
ZNF540-204ENST00000586792 GOLPH3LQ9H4A5 285 aa4.87□□□□□ -1.63
ZNF540-204ENST00000586792 TMEM51Q9NW97 253 aa4.87□□□□□ -1.63
ZNF540-204ENST00000586792 EHD2Q9NZN4 543 aa4.87□□□□□ -1.63
ZNF540-204ENST00000586792 HSFX1Q9UBD0 423 aa4.87□□□□□ -1.63
ZNF540-204ENST00000586792 CDH7Q9ULB5 785 aa4.87□□□□□ -1.63
ZNF540-204ENST00000586792 DUSP12Q9UNI6 340 aa4.87□□□□□ -1.63
ZNF540-204ENST00000586792 ASB3Q9Y575 518 aa4.87□□□□□ -1.63
ZNF540-204ENST00000586792 ATP8B3O60423 1300 aa4.87□□□□□ -1.63
ZNF540-204ENST00000586792 PRUNE2Q8WUY3 3088 aa4.86□□□□□ -1.63
ZNF540-204ENST00000586792 A8MXQ7 604 aa4.86□□□□□ -1.63
ZNF540-204ENST00000586792 B4E171 279 aa4.86□□□□□ -1.63
ZNF540-204ENST00000586792 CETN3O15182 167 aa4.86□□□□□ -1.63
ZNF540-204ENST00000586792 KLRC4O43908 158 aa4.86□□□□□ -1.63
ZNF540-204ENST00000586792 PRAMEF4O60810 478 aa4.86□□□□□ -1.63
ZNF540-204ENST00000586792 APOA4P06727 396 aa4.86□□□□□ -1.63
ZNF540-204ENST00000586792 STMN1P16949 149 aa4.86□□□□□ -1.63
ZNF540-204ENST00000586792 ACAT1P24752 427 aaKnown RBP4.86□□□□□ -1.63
ZNF540-204ENST00000586792 ITPKBP27987 946 aa4.86□□□□□ -1.63
ZNF540-204ENST00000586792 CDC25CP30307 473 aa4.86□□□□□ -1.63
ZNF540-204ENST00000586792 HOXD13P35453 343 aa4.86□□□□□ -1.63
ZNF540-204ENST00000586792 FOLR3P41439 243 aa4.86□□□□□ -1.63
ZNF540-204ENST00000586792 FOXG1P55316 489 aaPredicted RBP4.86□□□□□ -1.63
ZNF540-204ENST00000586792 SH3BGRP55822 239 aaPredicted RBP4.86□□□□□ -1.63
ZNF540-204ENST00000586792 UBE2HP62256 183 aa4.86□□□□□ -1.63
ZNF540-204ENST00000586792 NTHL1P78549 312 aa4.86□□□□□ -1.63
ZNF540-204ENST00000586792 SATB1Q01826 763 aa4.86□□□□□ -1.63
ZNF540-204ENST00000586792 OCRLQ01968 901 aa4.86□□□□□ -1.63
ZNF540-204ENST00000586792 LRRC63Q05C16 580 aa4.86□□□□□ -1.63
ZNF540-204ENST00000586792 LRRC32Q14392 662 aa4.86□□□□□ -1.63
ZNF540-204ENST00000586792 SPARCL1Q14515 664 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms