RNA–Protein interactions for RNA: ENST00000585752.5

ATG4D-203, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 729 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-203ENST00000585752 ABCG1P45844 678 aa18.74■□□□□ 0.59
ATG4D-203ENST00000585752 MAXP61244 160 aa18.74■□□□□ 0.59
ATG4D-203ENST00000585752 SLC10A2Q12908 348 aaPredicted RBP18.74■□□□□ 0.59
ATG4D-203ENST00000585752 TCEA2Q15560 299 aa18.74■□□□□ 0.59
ATG4D-203ENST00000585752 ARMC12Q5T9G4 340 aa18.74■□□□□ 0.59
ATG4D-203ENST00000585752 GUSBP11Q6P575 273 aa18.74■□□□□ 0.59
ATG4D-203ENST00000585752 LVRNQ6Q4G3 990 aa18.74■□□□□ 0.59
ATG4D-203ENST00000585752 LSMEM2Q8N112 164 aa18.74■□□□□ 0.59
ATG4D-203ENST00000585752 WDR48Q8TAF3 677 aa18.74■□□□□ 0.59
ATG4D-203ENST00000585752 TFB1MQ8WVM0 346 aaKnown RBP18.74■□□□□ 0.59
ATG4D-203ENST00000585752 ALG3Q92685 438 aa18.74■□□□□ 0.59
ATG4D-203ENST00000585752 HES6Q96HZ4 224 aa18.74■□□□□ 0.59
ATG4D-203ENST00000585752 BOCQ9BWV1 1114 aa18.74■□□□□ 0.59
ATG4D-203ENST00000585752 TRMT1Q9NXH9 659 aaKnown RBP18.74■□□□□ 0.59
ATG4D-203ENST00000585752 GOLGA6AQ9NYA3 693 aa18.74■□□□□ 0.59
ATG4D-203ENST00000585752 SIRPGQ9P1W8 387 aa18.74■□□□□ 0.59
ATG4D-203ENST00000585752 PADI4Q9UM07 663 aa18.74■□□□□ 0.59
ATG4D-203ENST00000585752 LRP4O75096 1905 aa18.74■□□□□ 0.59
ATG4D-203ENST00000585752 DMXL2Q8TDJ6 3036 aa18.74■□□□□ 0.59
ATG4D-203ENST00000585752 TRAFD1O14545 582 aaPredicted RBP18.73■□□□□ 0.59
ATG4D-203ENST00000585752 BRINP1O60477 761 aa18.73■□□□□ 0.59
ATG4D-203ENST00000585752 USP12O75317 370 aa18.73■□□□□ 0.59
ATG4D-203ENST00000585752 PYGMP11217 842 aa18.73■□□□□ 0.59
ATG4D-203ENST00000585752 CCNB1P14635 433 aa18.73■□□□□ 0.59
ATG4D-203ENST00000585752 CA4P22748 312 aa18.73■□□□□ 0.59
ATG4D-203ENST00000585752 VIPR1P32241 457 aa18.73■□□□□ 0.59
ATG4D-203ENST00000585752 PTPN7P35236 360 aa18.73■□□□□ 0.59
ATG4D-203ENST00000585752 EPHB1P54762 984 aa18.73■□□□□ 0.59
ATG4D-203ENST00000585752 PPIDQ08752 370 aaKnown RBP18.73■□□□□ 0.59
ATG4D-203ENST00000585752 BBS12Q6ZW61 710 aa18.73■□□□□ 0.59
ATG4D-203ENST00000585752 USP45Q70EL2 814 aa18.73■□□□□ 0.59
ATG4D-203ENST00000585752 OR56A4Q8NGH8 313 aa18.73■□□□□ 0.59
ATG4D-203ENST00000585752 FGF11Q92914 225 aa18.73■□□□□ 0.59
ATG4D-203ENST00000585752 NUS1Q96E22 293 aa18.73■□□□□ 0.59
ATG4D-203ENST00000585752 LGMNQ99538 433 aa18.73■□□□□ 0.59
ATG4D-203ENST00000585752 MGME1Q9BQP7 344 aa18.73■□□□□ 0.59
ATG4D-203ENST00000585752 POLR1EQ9GZS1 481 aaKnown RBP18.73■□□□□ 0.59
ATG4D-203ENST00000585752 NOD2Q9HC29 1040 aa18.73■□□□□ 0.59
ATG4D-203ENST00000585752 RBM22Q9NW64 420 aaKnown RBP eCLIP18.73■□□□□ 0.59
ATG4D-203ENST00000585752 B4GALT6Q9UBX8 382 aa18.73■□□□□ 0.59
ATG4D-203ENST00000585752 GPR34Q9UPC5 381 aa18.73■□□□□ 0.59
ATG4D-203ENST00000585752 ASPMQ8IZT6 3477 aa18.72■□□□□ 0.59
ATG4D-203ENST00000585752 ACACAQ13085 2346 aa18.72■□□□□ 0.59
ATG4D-203ENST00000585752 H7C0C1 242 aa18.72■□□□□ 0.59
ATG4D-203ENST00000585752 APOC4-APOC2K7ER74 178 aa18.72■□□□□ 0.59
ATG4D-203ENST00000585752 DDX3YO15523 660 aaKnown RBP18.72■□□□□ 0.59
ATG4D-203ENST00000585752 KIF5CO60282 957 aa18.72■□□□□ 0.59
ATG4D-203ENST00000585752 APOC2P02655 101 aa18.72■□□□□ 0.59
ATG4D-203ENST00000585752 CES1P23141 567 aa18.72■□□□□ 0.59
ATG4D-203ENST00000585752 ATP5OP48047 213 aa18.72■□□□□ 0.59
ATG4D-203ENST00000585752 KIAA1024LP59773 190 aa18.72■□□□□ 0.59
ATG4D-203ENST00000585752 RALGDSQ12967 914 aa18.72■□□□□ 0.59
ATG4D-203ENST00000585752 SPIDRQ14159 915 aa18.72■□□□□ 0.59
ATG4D-203ENST00000585752 ALG11Q2TAA5 492 aa18.72■□□□□ 0.59
ATG4D-203ENST00000585752 MEI1Q5TIA1 1274 aa18.72■□□□□ 0.59
ATG4D-203ENST00000585752 CDCP2Q5VXM1 449 aa18.72■□□□□ 0.59
ATG4D-203ENST00000585752 PNCKQ6P2M8 343 aa18.72■□□□□ 0.59
ATG4D-203ENST00000585752 CRTC1Q6UUV9 634 aa18.72■□□□□ 0.59
ATG4D-203ENST00000585752 RBM44Q6ZP01 1051 aaKnown RBP18.72■□□□□ 0.59
ATG4D-203ENST00000585752 TAF8Q7Z7C8 310 aa18.72■□□□□ 0.59
ATG4D-203ENST00000585752 PDZD3Q86UT5 571 aa18.72■□□□□ 0.59
ATG4D-203ENST00000585752 ZC3H18Q86VM9 953 aaKnown RBP18.72■□□□□ 0.59
ATG4D-203ENST00000585752 ARL10Q8N8L6 244 aa18.72■□□□□ 0.59
ATG4D-203ENST00000585752 PLA2G15Q8NCC3 412 aa18.72■□□□□ 0.59
ATG4D-203ENST00000585752 OR6C4Q8NGE1 309 aa18.72■□□□□ 0.59
ATG4D-203ENST00000585752 FATE1Q969F0 183 aa18.72■□□□□ 0.59
ATG4D-203ENST00000585752 GRAMD1AQ96CP6 724 aa18.72■□□□□ 0.59
ATG4D-203ENST00000585752 CLPBQ9H078 707 aa18.72■□□□□ 0.59
ATG4D-203ENST00000585752 WDR26Q9H7D7 661 aa18.72■□□□□ 0.59
ATG4D-203ENST00000585752 PHPT1Q9NRX4 125 aaPredicted RBP18.72■□□□□ 0.59
ATG4D-203ENST00000585752 AMACRQ9UHK6 382 aa18.72■□□□□ 0.59
ATG4D-203ENST00000585752 A0A087WV48 116 aa18.71■□□□□ 0.59
ATG4D-203ENST00000585752 LY6G6EA0A0G2JKS1 128 aa18.71■□□□□ 0.59
ATG4D-203ENST00000585752 HACD1B0YJ81 288 aa18.71■□□□□ 0.59
ATG4D-203ENST00000585752 MTSS1O43312 755 aa18.71■□□□□ 0.59
ATG4D-203ENST00000585752 HTRA2O43464 458 aaPredicted RBP18.71■□□□□ 0.59
ATG4D-203ENST00000585752 PECAM1P16284 738 aaPredicted RBP18.71■□□□□ 0.59
ATG4D-203ENST00000585752 GABREP78334 506 aa18.71■□□□□ 0.59
ATG4D-203ENST00000585752 SLC35F3Q8IY50 421 aa18.71■□□□□ 0.59
ATG4D-203ENST00000585752 TTC13Q8NBP0 860 aa18.71■□□□□ 0.59
ATG4D-203ENST00000585752 LRRN4Q8WUT4 740 aa18.71■□□□□ 0.59
ATG4D-203ENST00000585752 MAML1Q92585 1016 aa18.71■□□□□ 0.59
ATG4D-203ENST00000585752 OLFM3Q96PB7 478 aa18.71■□□□□ 0.59
ATG4D-203ENST00000585752 SEMA3CQ99985 751 aa18.71■□□□□ 0.59
ATG4D-203ENST00000585752 CCDC3Q9BQI4 270 aa18.71■□□□□ 0.59
ATG4D-203ENST00000585752 SAE1Q9UBE0 346 aaPredicted RBP18.71■□□□□ 0.59
ATG4D-203ENST00000585752 PCDHB1Q9Y5F3 818 aa18.71■□□□□ 0.59
ATG4D-203ENST00000585752 U3KQA8 63 aa18.71■□□□□ 0.59
ATG4D-203ENST00000585752 WDFY3Q8IZQ1 3526 aa18.71■□□□□ 0.59
ATG4D-203ENST00000585752 EIF4E1BA6NMX2 242 aaKnown RBP18.7■□□□□ 0.58
ATG4D-203ENST00000585752 KCNK1O00180 336 aa18.7■□□□□ 0.58
ATG4D-203ENST00000585752 TCEA3O75764 348 aa18.7■□□□□ 0.58
ATG4D-203ENST00000585752 PEX11BO96011 259 aa18.7■□□□□ 0.58
ATG4D-203ENST00000585752 JCHAINP01591 159 aa18.7■□□□□ 0.58
ATG4D-203ENST00000585752 HOXC4P09017 264 aaPredicted RBP18.7■□□□□ 0.58
ATG4D-203ENST00000585752 CR2P20023 1033 aa18.7■□□□□ 0.58
ATG4D-203ENST00000585752 RBMS1P29558 406 aaKnown RBP18.7■□□□□ 0.58
ATG4D-203ENST00000585752 EIF2S3P41091 472 aaKnown RBP18.7■□□□□ 0.58
ATG4D-203ENST00000585752 RP1P56715 2156 aa18.7■□□□□ 0.58
ATG4D-203ENST00000585752 ZNF569Q5MCW4 686 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms