RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 NDUFS3O75489 264 aa11.26□□□□□ -0.61
LIG3-204ENST00000585740 PIGNO95427 931 aa11.26□□□□□ -0.61
LIG3-204ENST00000585740 IGSF6O95976 241 aa11.26□□□□□ -0.61
LIG3-204ENST00000585740 ENO1P06733 434 aaKnown RBP11.26□□□□□ -0.61
LIG3-204ENST00000585740 PYGLP06737 847 aa11.26□□□□□ -0.61
LIG3-204ENST00000585740 LINC00271P0C7V0 271 aa11.26□□□□□ -0.61
LIG3-204ENST00000585740 EZRP15311 586 aaKnown RBP11.26□□□□□ -0.61
LIG3-204ENST00000585740 CCND1P24385 295 aa11.26□□□□□ -0.61
LIG3-204ENST00000585740 ADSLP30566 484 aaPredicted RBP11.26□□□□□ -0.61
LIG3-204ENST00000585740 PPARGP37231 505 aaPredicted RBP11.26□□□□□ -0.61
LIG3-204ENST00000585740 TTPAP49638 278 aa11.26□□□□□ -0.61
LIG3-204ENST00000585740 EPHB1P54762 984 aa11.26□□□□□ -0.61
LIG3-204ENST00000585740 NAGLUP54802 743 aa11.26□□□□□ -0.61
LIG3-204ENST00000585740 UBE3AQ05086 875 aa11.26□□□□□ -0.61
LIG3-204ENST00000585740 FPGSQ05932 587 aa11.26□□□□□ -0.61
LIG3-204ENST00000585740 TRAF2Q12933 501 aa11.26□□□□□ -0.61
LIG3-204ENST00000585740 ZRSR2Q15696 482 aaKnown RBP11.26□□□□□ -0.61
LIG3-204ENST00000585740 ARHGAP15Q53QZ3 475 aa11.26□□□□□ -0.61
LIG3-204ENST00000585740 RAB44Q7Z6P3 723 aaPredicted RBP11.26□□□□□ -0.61
LIG3-204ENST00000585740 TTC7BQ86TV6 843 aa11.26□□□□□ -0.61
LIG3-204ENST00000585740 HS6ST3Q8IZP7 471 aa11.26□□□□□ -0.61
LIG3-204ENST00000585740 STK40Q8N2I9 435 aa11.26□□□□□ -0.61
LIG3-204ENST00000585740 TEX9Q8N6V9 391 aa11.26□□□□□ -0.61
LIG3-204ENST00000585740 UTP4Q969X6 686 aaKnown RBP11.26□□□□□ -0.61
LIG3-204ENST00000585740 CMTM5Q96DZ9 223 aa11.26□□□□□ -0.61
LIG3-204ENST00000585740 FAM122AQ96E09 287 aa11.26□□□□□ -0.61
LIG3-204ENST00000585740 MYO19Q96H55 970 aa11.26□□□□□ -0.61
LIG3-204ENST00000585740 EXOC2Q96KP1 924 aa11.26□□□□□ -0.61
LIG3-204ENST00000585740 ASB2Q96Q27 587 aa11.26□□□□□ -0.61
LIG3-204ENST00000585740 POMKQ9H5K3 350 aa11.26□□□□□ -0.61
LIG3-204ENST00000585740 COG4Q9H9E3 785 aa11.26□□□□□ -0.61
LIG3-204ENST00000585740 MAGEE1Q9HCI5 957 aa11.26□□□□□ -0.61
LIG3-204ENST00000585740 TAS2R13Q9NYV9 303 aa11.26□□□□□ -0.61
LIG3-204ENST00000585740 TMCO1Q9UM00 188 aa11.26□□□□□ -0.61
LIG3-204ENST00000585740 SPO11Q9Y5K1 396 aa11.26□□□□□ -0.61
LIG3-204ENST00000585740 NUMBLQ9Y6R0 609 aa11.26□□□□□ -0.61
LIG3-204ENST00000585740 B2RBV5 119 aa11.25□□□□□ -0.61
LIG3-204ENST00000585740 LEFTY2O00292 366 aa11.25□□□□□ -0.61
LIG3-204ENST00000585740 CCL22O00626 93 aa11.25□□□□□ -0.61
LIG3-204ENST00000585740 GSC2O15499 205 aa11.25□□□□□ -0.61
LIG3-204ENST00000585740 MAGEC1O60732 1142 aa11.25□□□□□ -0.61
LIG3-204ENST00000585740 IPO13O94829 963 aaKnown RBP11.25□□□□□ -0.61
LIG3-204ENST00000585740 RHOBTB1O94844 696 aa11.25□□□□□ -0.61
LIG3-204ENST00000585740 PIRTP0C851 137 aa11.25□□□□□ -0.61
LIG3-204ENST00000585740 SPATA31D3P0C874 917 aa11.25□□□□□ -0.61
LIG3-204ENST00000585740 TPBGLP0DKB5 382 aa11.25□□□□□ -0.61
LIG3-204ENST00000585740 PTPN2P17706 415 aa11.25□□□□□ -0.61
LIG3-204ENST00000585740 TFEBP19484 476 aa11.25□□□□□ -0.61
LIG3-204ENST00000585740 MPSTP25325 297 aa11.25□□□□□ -0.61
LIG3-204ENST00000585740 HOXA9P31269 272 aa11.25□□□□□ -0.61
LIG3-204ENST00000585740 ARRB2P32121 409 aa11.25□□□□□ -0.61
LIG3-204ENST00000585740 BMPR1AP36894 532 aa11.25□□□□□ -0.61
LIG3-204ENST00000585740 CLCN4P51793 760 aa11.25□□□□□ -0.61
LIG3-204ENST00000585740 EPHA5P54756 1037 aa11.25□□□□□ -0.61
LIG3-204ENST00000585740 CDKN2DP55273 166 aa11.25□□□□□ -0.61
LIG3-204ENST00000585740 ATP6V0D1P61421 351 aa11.25□□□□□ -0.61
LIG3-204ENST00000585740 NFKB2Q00653 900 aa11.25□□□□□ -0.61
LIG3-204ENST00000585740 SATB1Q01826 763 aa11.25□□□□□ -0.61
LIG3-204ENST00000585740 PDAP1Q13442 181 aaKnown RBP11.25□□□□□ -0.61
LIG3-204ENST00000585740 ARL13AQ5H913 290 aaPredicted RBP11.25□□□□□ -0.61
LIG3-204ENST00000585740 TRIM67Q6ZTA4 783 aa11.25□□□□□ -0.61
LIG3-204ENST00000585740 SPATA31D4Q6ZUB0 917 aa11.25□□□□□ -0.61
LIG3-204ENST00000585740 MAVSQ7Z434 540 aa11.25□□□□□ -0.61
LIG3-204ENST00000585740 TREML1Q86YW5 311 aa11.25□□□□□ -0.61
LIG3-204ENST00000585740 RNF135Q8IUD6 432 aa11.25□□□□□ -0.61
LIG3-204ENST00000585740 TTC30BQ8N4P2 665 aa11.25□□□□□ -0.61
LIG3-204ENST00000585740 NKAPQ8N5F7 415 aaKnown RBP11.25□□□□□ -0.61
LIG3-204ENST00000585740 TXNDC5Q8NBS9 432 aaKnown RBP11.25□□□□□ -0.61
LIG3-204ENST00000585740 MDGA1Q8NFP4 955 aa11.25□□□□□ -0.61
LIG3-204ENST00000585740 RHEBL1Q8TAI7 183 aa11.25□□□□□ -0.61
LIG3-204ENST00000585740 LPGAT1Q92604 370 aa11.25□□□□□ -0.61
LIG3-204ENST00000585740 BADQ92934 168 aa11.25□□□□□ -0.61
LIG3-204ENST00000585740 PRR11Q96HE9 360 aaPredicted RBP11.25□□□□□ -0.61
LIG3-204ENST00000585740 TTC1Q99614 292 aa11.25□□□□□ -0.61
LIG3-204ENST00000585740 TCF25Q9BQ70 676 aa11.25□□□□□ -0.61
LIG3-204ENST00000585740 CORO1BQ9BR76 489 aa11.25□□□□□ -0.61
LIG3-204ENST00000585740 CADM1Q9BY67 442 aaKnown RBP11.25□□□□□ -0.61
LIG3-204ENST00000585740 MTIF3Q9H2K0 278 aaKnown RBP11.25□□□□□ -0.61
LIG3-204ENST00000585740 TFB2MQ9H5Q4 396 aaKnown RBP11.25□□□□□ -0.61
LIG3-204ENST00000585740 SUDS3Q9H7L9 328 aaPredicted RBP11.25□□□□□ -0.61
LIG3-204ENST00000585740 TCF7L2Q9NQB0 619 aa11.25□□□□□ -0.61
LIG3-204ENST00000585740 ABCB8Q9NUT2 735 aa11.25□□□□□ -0.61
LIG3-204ENST00000585740 ARMCX1Q9P291 453 aa11.25□□□□□ -0.61
LIG3-204ENST00000585740 CDYLQ9Y232 598 aa11.25□□□□□ -0.61
LIG3-204ENST00000585740 CRYL1Q9Y2S2 319 aa11.25□□□□□ -0.61
LIG3-204ENST00000585740 PKP3Q9Y446 797 aa11.25□□□□□ -0.61
LIG3-204ENST00000585740 PCDHGC4Q9Y5F7 938 aa11.25□□□□□ -0.61
LIG3-204ENST00000585740 ZNF106Q9H2Y7 1883 aaKnown RBP11.25□□□□□ -0.61
LIG3-204ENST00000585740 A0A1W2PRU2 124 aa11.24□□□□□ -0.61
LIG3-204ENST00000585740 A8MT66 165 aa11.24□□□□□ -0.61
LIG3-204ENST00000585740 PRR5-ARHGAP8B1AHC4 643 aa11.24□□□□□ -0.61
LIG3-204ENST00000585740 BUD23O43709 281 aaKnown RBP11.24□□□□□ -0.61
LIG3-204ENST00000585740 VPS26AO75436 327 aa11.24□□□□□ -0.61
LIG3-204ENST00000585740 SRP72O76094 671 aaKnown RBP11.24□□□□□ -0.61
LIG3-204ENST00000585740 PGLSO95336 258 aa11.24□□□□□ -0.61
LIG3-204ENST00000585740 SLC4A1P02730 911 aa11.24□□□□□ -0.61
LIG3-204ENST00000585740 PDHA1P08559 390 aa11.24□□□□□ -0.61
LIG3-204ENST00000585740 CD1DP15813 335 aa11.24□□□□□ -0.61
LIG3-204ENST00000585740 IMPDH1P20839 514 aa11.24□□□□□ -0.61
LIG3-204ENST00000585740 MC4RP32245 332 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms