RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 CCDC173Q0VFZ6 552 aa24.89■■□□□ 1.58
TSEN54-209ENST00000583454 RTP5Q14D33 572 aa24.89■■□□□ 1.58
TSEN54-209ENST00000583454 SLC13A5Q86YT5 568 aaPredicted RBP24.89■■□□□ 1.58
TSEN54-209ENST00000583454 NDUFAF2Q8N183 169 aa24.89■■□□□ 1.58
TSEN54-209ENST00000583454 CACTIN-AS1Q8N1I8 211 aa24.89■■□□□ 1.58
TSEN54-209ENST00000583454 BBC3Q96PG8 261 aaPredicted RBP24.89■■□□□ 1.58
TSEN54-209ENST00000583454 R3HDM2Q9Y2K5 976 aaKnown RBP24.89■■□□□ 1.58
TSEN54-209ENST00000583454 A0A0J9YYE9 177 aa24.88■■□□□ 1.57
TSEN54-209ENST00000583454 POM121BA6NF01 834 aa24.88■■□□□ 1.57
TSEN54-209ENST00000583454 ZNF189O75820 626 aaPredicted RBP24.88■■□□□ 1.57
TSEN54-209ENST00000583454 TRBC1P01850 177 aa24.88■■□□□ 1.57
TSEN54-209ENST00000583454 VIPR1P32241 457 aa24.88■■□□□ 1.57
TSEN54-209ENST00000583454 DARS2Q6PI48 645 aaKnown RBP24.88■■□□□ 1.57
TSEN54-209ENST00000583454 PID1Q7Z2X4 250 aa24.88■■□□□ 1.57
TSEN54-209ENST00000583454 DCBLD1Q8N8Z6 715 aa24.88■■□□□ 1.57
TSEN54-209ENST00000583454 SLC35B2Q8TB61 432 aa24.88■■□□□ 1.57
TSEN54-209ENST00000583454 IFT43Q96FT9 208 aa24.88■■□□□ 1.57
TSEN54-209ENST00000583454 TRIB3Q96RU7 358 aa24.88■■□□□ 1.57
TSEN54-209ENST00000583454 FERMT1Q9BQL6 677 aa24.88■■□□□ 1.57
TSEN54-209ENST00000583454 C1QTNF7Q9BXJ2 289 aa24.88■■□□□ 1.57
TSEN54-209ENST00000583454 NRSN2Q9GZP1 204 aa24.88■■□□□ 1.57
TSEN54-209ENST00000583454 KLHL8Q9P2G9 620 aaPredicted RBP24.88■■□□□ 1.57
TSEN54-209ENST00000583454 COQ6Q9Y2Z9 468 aa24.88■■□□□ 1.57
TSEN54-209ENST00000583454 ATMQ13315 3056 aa24.87■■□□□ 1.57
TSEN54-209ENST00000583454 LY6G6EA0A0G2JKS1 128 aa24.87■■□□□ 1.57
TSEN54-209ENST00000583454 A8MX80 341 aa24.87■■□□□ 1.57
TSEN54-209ENST00000583454 FPGTO14772 594 aa24.87■■□□□ 1.57
TSEN54-209ENST00000583454 HEXIM1O94992 359 aaKnown RBP24.87■■□□□ 1.57
TSEN54-209ENST00000583454 ELFN1P0C7U0 828 aa24.87■■□□□ 1.57
TSEN54-209ENST00000583454 CYP2A6P11509 494 aaPredicted RBP24.87■■□□□ 1.57
TSEN54-209ENST00000583454 NFKB1P19838 968 aa24.87■■□□□ 1.57
TSEN54-209ENST00000583454 CNGA3Q16281 694 aa24.87■■□□□ 1.57
TSEN54-209ENST00000583454 KYAT3Q6YP21 454 aaKnown RBP24.87■■□□□ 1.57
TSEN54-209ENST00000583454 Q6ZSR6 202 aa24.87■■□□□ 1.57
TSEN54-209ENST00000583454 USP45Q70EL2 814 aa24.87■■□□□ 1.57
TSEN54-209ENST00000583454 TP53I13Q8NBR0 393 aaPredicted RBP24.87■■□□□ 1.57
TSEN54-209ENST00000583454 SPATA22Q8NHS9 363 aa24.87■■□□□ 1.57
TSEN54-209ENST00000583454 FCRL5Q96RD9 977 aa24.87■■□□□ 1.57
TSEN54-209ENST00000583454 TRMT1Q9NXH9 659 aaKnown RBP24.87■■□□□ 1.57
TSEN54-209ENST00000583454 U3KQA8 63 aa24.87■■□□□ 1.57
TSEN54-209ENST00000583454 NPIPB15A6NHN6 443 aaPredicted RBP24.86■■□□□ 1.57
TSEN54-209ENST00000583454 A6NNZ2 444 aa24.86■■□□□ 1.57
TSEN54-209ENST00000583454 FFAR2O15552 330 aa24.86■■□□□ 1.57
TSEN54-209ENST00000583454 LZTS3O60299 673 aaPredicted RBP24.86■■□□□ 1.57
TSEN54-209ENST00000583454 CTPS1P17812 591 aa24.86■■□□□ 1.57
TSEN54-209ENST00000583454 GM2AP17900 193 aa24.86■■□□□ 1.57
TSEN54-209ENST00000583454 LHCGRP22888 699 aa24.86■■□□□ 1.57
TSEN54-209ENST00000583454 EPHB1P54762 984 aa24.86■■□□□ 1.57
TSEN54-209ENST00000583454 FZD2Q14332 565 aa24.86■■□□□ 1.57
TSEN54-209ENST00000583454 PTPRRQ15256 657 aa24.86■■□□□ 1.57
TSEN54-209ENST00000583454 WSCD2Q2TBF2 565 aa24.86■■□□□ 1.57
TSEN54-209ENST00000583454 TPRG1LQ5T0D9 272 aa24.86■■□□□ 1.57
TSEN54-209ENST00000583454 DCP2Q8IU60 420 aaKnown RBP24.86■■□□□ 1.57
TSEN54-209ENST00000583454 COQ10AQ96MF6 247 aa24.86■■□□□ 1.57
TSEN54-209ENST00000583454 SMIM14Q96QK8 99 aa24.86■■□□□ 1.57
TSEN54-209ENST00000583454 FRMD8P1Q9BZ68 369 aaPredicted RBP24.86■■□□□ 1.57
TSEN54-209ENST00000583454 MBNL1Q9NR56 388 aaKnown RBP24.86■■□□□ 1.57
TSEN54-209ENST00000583454 JRKLQ9Y4A0 524 aa24.86■■□□□ 1.57
TSEN54-209ENST00000583454 ANKRD66B4E2M5 251 aa24.85■■□□□ 1.57
TSEN54-209ENST00000583454 PSMD11O00231 422 aa24.85■■□□□ 1.57
TSEN54-209ENST00000583454 KCNN4O15554 427 aa24.85■■□□□ 1.57
TSEN54-209ENST00000583454 RECQL5O94762 991 aaPredicted RBP24.85■■□□□ 1.57
TSEN54-209ENST00000583454 MT-CYBP00156 380 aaPredicted RBP24.85■■□□□ 1.57
TSEN54-209ENST00000583454 ALPIP09923 528 aa24.85■■□□□ 1.57
TSEN54-209ENST00000583454 IGFALSP35858 605 aa24.85■■□□□ 1.57
TSEN54-209ENST00000583454 PFN3P60673 137 aa24.85■■□□□ 1.57
TSEN54-209ENST00000583454 LRRC14Q15048 493 aa24.85■■□□□ 1.57
TSEN54-209ENST00000583454 QPCTQ16769 361 aa24.85■■□□□ 1.57
TSEN54-209ENST00000583454 ZNF542PQ5EBM4 170 aa24.85■■□□□ 1.57
TSEN54-209ENST00000583454 CRTC1Q6UUV9 634 aa24.85■■□□□ 1.57
TSEN54-209ENST00000583454 KDM7AQ6ZMT4 941 aa24.85■■□□□ 1.57
TSEN54-209ENST00000583454 PTAR1Q7Z6K3 402 aaPredicted RBP24.85■■□□□ 1.57
TSEN54-209ENST00000583454 LPCAT1Q8NF37 534 aa24.85■■□□□ 1.57
TSEN54-209ENST00000583454 LYSMD1Q96S90 227 aa24.85■■□□□ 1.57
TSEN54-209ENST00000583454 ADGRE3Q9BY15 652 aa24.85■■□□□ 1.57
TSEN54-209ENST00000583454 FAM153AQ9UHL3 310 aa24.85■■□□□ 1.57
TSEN54-209ENST00000583454 CLCA2Q9UQC9 943 aa24.85■■□□□ 1.57
TSEN54-209ENST00000583454 CAPN8A6NHC0 703 aa24.84■■□□□ 1.57
TSEN54-209ENST00000583454 CKMT1AP12532 417 aa24.84■■□□□ 1.57
TSEN54-209ENST00000583454 EIF2S3P41091 472 aaKnown RBP24.84■■□□□ 1.57
TSEN54-209ENST00000583454 RABIFP47224 123 aa24.84■■□□□ 1.57
TSEN54-209ENST00000583454 CDK18Q07002 472 aa24.84■■□□□ 1.57
TSEN54-209ENST00000583454 ANKRD20A2Q5SQ80 823 aa24.84■■□□□ 1.57
TSEN54-209ENST00000583454 ANKRD20A1Q5TYW2 823 aa24.84■■□□□ 1.57
TSEN54-209ENST00000583454 ANKRD20A3Q5VUR7 823 aa24.84■■□□□ 1.57
TSEN54-209ENST00000583454 KDELC1Q6UW63 502 aa24.84■■□□□ 1.57
TSEN54-209ENST00000583454 TSPAN33Q86UF1 283 aa24.84■■□□□ 1.57
TSEN54-209ENST00000583454 OXNAD1Q96HP4 312 aaPredicted RBP24.84■■□□□ 1.57
TSEN54-209ENST00000583454 DCBLD2Q96PD2 775 aa24.84■■□□□ 1.57
TSEN54-209ENST00000583454 NLGN3Q9NZ94 848 aa24.84■■□□□ 1.57
TSEN54-209ENST00000583454 KLF15Q9UIH9 416 aa24.84■■□□□ 1.57
TSEN54-209ENST00000583454 DNPEPQ9ULA0 475 aa24.84■■□□□ 1.57
TSEN54-209ENST00000583454 PYCARDQ9ULZ3 195 aa24.84■■□□□ 1.57
TSEN54-209ENST00000583454 RP1P56715 2156 aa24.83■■□□□ 1.57
TSEN54-209ENST00000583454 SPTY2D1-AS1A0A0U1RR47 76 aa24.83■■□□□ 1.57
TSEN54-209ENST00000583454 C5orf60A6NFR6 353 aa24.83■■□□□ 1.57
TSEN54-209ENST00000583454 TOR1BO14657 336 aa24.83■■□□□ 1.57
TSEN54-209ENST00000583454 PMPCBO75439 489 aa24.83■■□□□ 1.57
TSEN54-209ENST00000583454 STK10O94804 968 aaKnown RBP24.83■■□□□ 1.57
TSEN54-209ENST00000583454 MYF5P13349 255 aa24.83■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms