RNA–Protein interactions for RNA: ENST00000583441.1

SMCHD1-209, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 657 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-209ENST00000583441 SELENOVP59797 346 aa3.82□□□□□ -1.8
SMCHD1-209ENST00000583441 ADORA2A-AS1P86434 159 aa3.82□□□□□ -1.8
SMCHD1-209ENST00000583441 CALD1Q05682 793 aaKnown RBP3.82□□□□□ -1.8
SMCHD1-209ENST00000583441 NEDD9Q14511 834 aa3.82□□□□□ -1.8
SMCHD1-209ENST00000583441 SOWAHAQ2M3V2 549 aa3.82□□□□□ -1.8
SMCHD1-209ENST00000583441 CXorf66Q5JRM2 361 aaPredicted RBP3.82□□□□□ -1.8
SMCHD1-209ENST00000583441 PLEKHA7Q6IQ23 1121 aa3.82□□□□□ -1.8
SMCHD1-209ENST00000583441 C16orf54Q6UWD8 224 aa3.82□□□□□ -1.8
SMCHD1-209ENST00000583441 CHST9Q7L1S5 443 aa3.82□□□□□ -1.8
SMCHD1-209ENST00000583441 MON1BQ7L1V2 547 aa3.82□□□□□ -1.8
SMCHD1-209ENST00000583441 PIP4P1Q86T03 277 aa3.82□□□□□ -1.8
SMCHD1-209ENST00000583441 MB21D2Q8IYB1 491 aaPredicted RBP3.82□□□□□ -1.8
SMCHD1-209ENST00000583441 SPEM1Q8N4L4 309 aa3.82□□□□□ -1.8
SMCHD1-209ENST00000583441 ENGASEQ8NFI3 743 aa3.82□□□□□ -1.8
SMCHD1-209ENST00000583441 HUS1BQ8NHY5 278 aa3.82□□□□□ -1.8
SMCHD1-209ENST00000583441 WFIKKN2Q8TEU8 576 aa3.82□□□□□ -1.8
SMCHD1-209ENST00000583441 JAKMIP2Q96AA8 810 aa3.82□□□□□ -1.8
SMCHD1-209ENST00000583441 SLC41A2Q96JW4 573 aa3.82□□□□□ -1.8
SMCHD1-209ENST00000583441 FAM84BQ96KN1 310 aaPredicted RBP3.82□□□□□ -1.8
SMCHD1-209ENST00000583441 ZNF570Q96NI8 536 aa3.82□□□□□ -1.8
SMCHD1-209ENST00000583441 C1QTNF1Q9BXJ1 281 aa3.82□□□□□ -1.8
SMCHD1-209ENST00000583441 TEX12Q9BXU0 123 aa3.82□□□□□ -1.8
SMCHD1-209ENST00000583441 PDZD7Q9H5P4 517 aa3.82□□□□□ -1.8
SMCHD1-209ENST00000583441 RANGRFQ9HD47 186 aaPredicted RBP3.82□□□□□ -1.8
SMCHD1-209ENST00000583441 IL36RNQ9UBH0 155 aa3.82□□□□□ -1.8
SMCHD1-209ENST00000583441 HEY2Q9UBP5 337 aa3.82□□□□□ -1.8
SMCHD1-209ENST00000583441 PAM16Q9Y3D7 125 aa3.82□□□□□ -1.8
SMCHD1-209ENST00000583441 RAI2Q9Y5P3 530 aa3.82□□□□□ -1.8
SMCHD1-209ENST00000583441 RUSC2Q8N2Y8 1516 aa3.81□□□□□ -1.8
SMCHD1-209ENST00000583441 IGLV5-39A0A0G2JS06 123 aa3.81□□□□□ -1.8
SMCHD1-209ENST00000583441 TMEM272A0A1B0GTI8 110 aa3.81□□□□□ -1.8
SMCHD1-209ENST00000583441 FAM237AA0A1B0GTK4 181 aa3.81□□□□□ -1.8
SMCHD1-209ENST00000583441 A0A1W2PPC1 479 aa3.81□□□□□ -1.8
SMCHD1-209ENST00000583441 SYNDIG1LA6NDD5 238 aa3.81□□□□□ -1.8
SMCHD1-209ENST00000583441 TMEM202A6NGA9 273 aa3.81□□□□□ -1.8
SMCHD1-209ENST00000583441 AKR1B15C9JRZ8 316 aaPredicted RBP3.81□□□□□ -1.8
SMCHD1-209ENST00000583441 VWA5AO00534 786 aa3.81□□□□□ -1.8
SMCHD1-209ENST00000583441 WNT9BO14905 357 aa3.81□□□□□ -1.8
SMCHD1-209ENST00000583441 RGS11O94810 467 aa3.81□□□□□ -1.8
SMCHD1-209ENST00000583441 NKX2-2O95096 273 aa3.81□□□□□ -1.8
SMCHD1-209ENST00000583441 OR2C1O95371 312 aa3.81□□□□□ -1.8
SMCHD1-209ENST00000583441 GARSP41250 739 aaKnown RBP3.81□□□□□ -1.8
SMCHD1-209ENST00000583441 CXCR3P49682 368 aa3.81□□□□□ -1.8
SMCHD1-209ENST00000583441 ACSM2AQ08AH3 577 aa3.81□□□□□ -1.8
SMCHD1-209ENST00000583441 NAE1Q13564 534 aa3.81□□□□□ -1.8
SMCHD1-209ENST00000583441 PTGR1Q14914 329 aa3.81□□□□□ -1.8
SMCHD1-209ENST00000583441 NAB2Q15742 525 aa3.81□□□□□ -1.8
SMCHD1-209ENST00000583441 COL28A1Q2UY09 1125 aa3.81□□□□□ -1.8
SMCHD1-209ENST00000583441 ZSCAN23Q3MJ62 389 aa3.81□□□□□ -1.8
SMCHD1-209ENST00000583441 SGO1Q5FBB7 561 aa3.81□□□□□ -1.8
SMCHD1-209ENST00000583441 RAB41Q5JT25 222 aa3.81□□□□□ -1.8
SMCHD1-209ENST00000583441 GKAP1Q5VSY0 366 aaPredicted RBP3.81□□□□□ -1.8
SMCHD1-209ENST00000583441 OTUD1Q5VV17 481 aaPredicted RBP3.81□□□□□ -1.8
SMCHD1-209ENST00000583441 DCAF12L2Q5VW00 463 aa3.81□□□□□ -1.8
SMCHD1-209ENST00000583441 ACSM2BQ68CK6 577 aa3.81□□□□□ -1.8
SMCHD1-209ENST00000583441 SEPT14Q6ZU15 432 aa3.81□□□□□ -1.8
SMCHD1-209ENST00000583441 ENOSF1Q7L5Y1 443 aa3.81□□□□□ -1.8
SMCHD1-209ENST00000583441 WDR63Q8IWG1 891 aa3.81□□□□□ -1.8
SMCHD1-209ENST00000583441 SLC35F3Q8IY50 421 aa3.81□□□□□ -1.8
SMCHD1-209ENST00000583441 C17orf53Q8N3J3 647 aaPredicted RBP3.81□□□□□ -1.8
SMCHD1-209ENST00000583441 ZBTB2Q8N680 514 aa3.81□□□□□ -1.8
SMCHD1-209ENST00000583441 AGBL3Q8NEM8 1001 aa3.81□□□□□ -1.8
SMCHD1-209ENST00000583441 ERP27Q96DN0 273 aa3.81□□□□□ -1.8
SMCHD1-209ENST00000583441 WDFY2Q96P53 400 aa3.81□□□□□ -1.8
SMCHD1-209ENST00000583441 SEPT5Q99719 369 aaPredicted RBP3.81□□□□□ -1.8
SMCHD1-209ENST00000583441 MSTO1Q9BUK6 570 aa3.81□□□□□ -1.8
SMCHD1-209ENST00000583441 ISCUQ9H1K1 167 aa3.81□□□□□ -1.8
SMCHD1-209ENST00000583441 SIRT3Q9NTG7 399 aaPredicted RBP3.81□□□□□ -1.8
SMCHD1-209ENST00000583441 NKIRAS2Q9NYR9 191 aa3.81□□□□□ -1.8
SMCHD1-209ENST00000583441 SUCLA2Q9P2R7 463 aaPredicted RBP3.81□□□□□ -1.8
SMCHD1-209ENST00000583441 CHORDC1Q9UHD1 332 aaPredicted RBP3.81□□□□□ -1.8
SMCHD1-209ENST00000583441 NFE2L3Q9Y4A8 694 aa3.81□□□□□ -1.8
SMCHD1-209ENST00000583441 KDM4EB2RXH2 506 aaPredicted RBP3.8□□□□□ -1.8
SMCHD1-209ENST00000583441 HS6ST1O60243 411 aa3.8□□□□□ -1.8
SMCHD1-209ENST00000583441 CYP1A2P05177 515 aa3.8□□□□□ -1.8
SMCHD1-209ENST00000583441 SRPRAP08240 638 aaKnown RBP3.8□□□□□ -1.8
SMCHD1-209ENST00000583441 CLTBP09497 229 aa3.8□□□□□ -1.8
SMCHD1-209ENST00000583441 SAT1P21673 171 aa3.8□□□□□ -1.8
SMCHD1-209ENST00000583441 HOXC9P31274 260 aa3.8□□□□□ -1.8
SMCHD1-209ENST00000583441 ACTN2P35609 894 aa3.8□□□□□ -1.8
SMCHD1-209ENST00000583441 MRPL12P52815 198 aaKnown RBP3.8□□□□□ -1.8
SMCHD1-209ENST00000583441 SORDQ00796 357 aa3.8□□□□□ -1.8
SMCHD1-209ENST00000583441 STK4Q13043 487 aa3.8□□□□□ -1.8
SMCHD1-209ENST00000583441 GPR18Q14330 331 aa3.8□□□□□ -1.8
SMCHD1-209ENST00000583441 ASTE1Q2TB18 679 aaPredicted RBP3.8□□□□□ -1.8
SMCHD1-209ENST00000583441 PPP6R3Q5H9R7 873 aaPredicted RBP3.8□□□□□ -1.8
SMCHD1-209ENST00000583441 DNTTIP2Q5QJE6 756 aaKnown RBP3.8□□□□□ -1.8
SMCHD1-209ENST00000583441 WASHC2DQ5SRD0 308 aa3.8□□□□□ -1.8
SMCHD1-209ENST00000583441 MFSD4BQ5TF39 518 aa3.8□□□□□ -1.8
SMCHD1-209ENST00000583441 HIST2H2BCQ6DN03 193 aa3.8□□□□□ -1.8
SMCHD1-209ENST00000583441 CAPRIN2Q6IMN6 1127 aaKnown RBP3.8□□□□□ -1.8
SMCHD1-209ENST00000583441 METTL2BQ6P1Q9 378 aaKnown RBP3.8□□□□□ -1.8
SMCHD1-209ENST00000583441 QSOX2Q6ZRP7 698 aa3.8□□□□□ -1.8
SMCHD1-209ENST00000583441 KRT74Q7RTS7 529 aa3.8□□□□□ -1.8
SMCHD1-209ENST00000583441 CACNA2D4Q7Z3S7 1137 aa3.8□□□□□ -1.8
SMCHD1-209ENST00000583441 PRPF39Q86UA1 669 aaKnown RBP3.8□□□□□ -1.8
SMCHD1-209ENST00000583441 NOXA1Q86UR1 476 aa3.8□□□□□ -1.8
SMCHD1-209ENST00000583441 EPHX4Q8IUS5 362 aa3.8□□□□□ -1.8
SMCHD1-209ENST00000583441 OR8H2Q8N162 312 aa3.8□□□□□ -1.8
SMCHD1-209ENST00000583441 C7orf57Q8NEG2 295 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms