RNA–Protein interactions for RNA: ENST00000581536.5

TOP3A-211, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-211ENST00000581536 RAD9BQ6WBX8 426 aa9.72□□□□□ -0.85
TOP3A-211ENST00000581536 RFX6Q8HWS3 928 aa9.72□□□□□ -0.85
TOP3A-211ENST00000581536 LRRC49Q8IUZ0 686 aa9.72□□□□□ -0.85
TOP3A-211ENST00000581536 SFTPA2Q8IWL1 248 aa9.72□□□□□ -0.85
TOP3A-211ENST00000581536 PHACTR4Q8IZ21 702 aa9.72□□□□□ -0.85
TOP3A-211ENST00000581536 BBS5Q8N3I7 341 aa9.72□□□□□ -0.85
TOP3A-211ENST00000581536 CNTD1Q8N815 330 aa9.72□□□□□ -0.85
TOP3A-211ENST00000581536 COQ10AQ96MF6 247 aa9.72□□□□□ -0.85
TOP3A-211ENST00000581536 MAK16Q9BXY0 300 aaKnown RBP9.72□□□□□ -0.85
TOP3A-211ENST00000581536 NLGN3Q9NZ94 848 aa9.72□□□□□ -0.85
TOP3A-211ENST00000581536 RALYQ9UKM9 306 aaKnown RBP9.72□□□□□ -0.85
TOP3A-211ENST00000581536 REXO2Q9Y3B8 237 aaKnown RBP9.72□□□□□ -0.85
TOP3A-211ENST00000581536 TTLL3Q9Y4R7 772 aa9.72□□□□□ -0.85
TOP3A-211ENST00000581536 EPN1Q9Y6I3 576 aaPredicted RBP9.72□□□□□ -0.85
TOP3A-211ENST00000581536 EPG5Q9HCE0 2579 aa9.72□□□□□ -0.85
TOP3A-211ENST00000581536 ADAMTS20P59510 1910 aa9.72□□□□□ -0.85
TOP3A-211ENST00000581536 CACNA1BQ00975 2339 aa9.71□□□□□ -0.85
TOP3A-211ENST00000581536 A0A0U1RQJ8 604 aa9.71□□□□□ -0.86
TOP3A-211ENST00000581536 CFAP69A5D8W1 941 aa9.71□□□□□ -0.86
TOP3A-211ENST00000581536 NEMP2A6NFY4 417 aa9.71□□□□□ -0.86
TOP3A-211ENST00000581536 SOCS5O75159 536 aa9.71□□□□□ -0.86
TOP3A-211ENST00000581536 HEXIM1O94992 359 aaKnown RBP9.71□□□□□ -0.86
TOP3A-211ENST00000581536 KRT1P04264 644 aa9.71□□□□□ -0.86
TOP3A-211ENST00000581536 C1SP09871 688 aa9.71□□□□□ -0.86
TOP3A-211ENST00000581536 CKMT1AP12532 417 aa9.71□□□□□ -0.86
TOP3A-211ENST00000581536 VIPR1P32241 457 aa9.71□□□□□ -0.86
TOP3A-211ENST00000581536 HSPA9P38646 679 aaKnown RBP9.71□□□□□ -0.86
TOP3A-211ENST00000581536 ETV3P41162 512 aa9.71□□□□□ -0.86
TOP3A-211ENST00000581536 MARCKSL1P49006 195 aa9.71□□□□□ -0.86
TOP3A-211ENST00000581536 PEX5P50542 639 aa9.71□□□□□ -0.86
TOP3A-211ENST00000581536 SRP54P61011 504 aaKnown RBP9.71□□□□□ -0.86
TOP3A-211ENST00000581536 DAB2P98082 770 aa9.71□□□□□ -0.86
TOP3A-211ENST00000581536 PPARDQ03181 441 aa9.71□□□□□ -0.86
TOP3A-211ENST00000581536 PTSQ03393 145 aa9.71□□□□□ -0.86
TOP3A-211ENST00000581536 CYP4F3Q08477 520 aa9.71□□□□□ -0.86
TOP3A-211ENST00000581536 PPIDQ08752 370 aaKnown RBP9.71□□□□□ -0.86
TOP3A-211ENST00000581536 AP1B1Q10567 949 aa9.71□□□□□ -0.86
TOP3A-211ENST00000581536 ZBTB17Q13105 803 aa9.71□□□□□ -0.86
TOP3A-211ENST00000581536 CDKN3Q16667 212 aa9.71□□□□□ -0.86
TOP3A-211ENST00000581536 OXLD1Q5BKU9 147 aa9.71□□□□□ -0.86
TOP3A-211ENST00000581536 ARMC12Q5T9G4 340 aa9.71□□□□□ -0.86
TOP3A-211ENST00000581536 KAZNQ674X7 775 aa9.71□□□□□ -0.86
TOP3A-211ENST00000581536 SLC9A4Q6AI14 798 aa9.71□□□□□ -0.86
TOP3A-211ENST00000581536 CRTC1Q6UUV9 634 aa9.71□□□□□ -0.86
TOP3A-211ENST00000581536 MACC1Q6ZN28 852 aa9.71□□□□□ -0.86
TOP3A-211ENST00000581536 Q6ZVL8 140 aa9.71□□□□□ -0.86
TOP3A-211ENST00000581536 KDELC2Q7Z4H8 507 aa9.71□□□□□ -0.86
TOP3A-211ENST00000581536 RHOT1Q8IXI2 618 aa9.71□□□□□ -0.86
TOP3A-211ENST00000581536 CCDC13Q8IYE1 715 aa9.71□□□□□ -0.86
TOP3A-211ENST00000581536 GALNT15Q8N3T1 639 aa9.71□□□□□ -0.86
TOP3A-211ENST00000581536 CCL4L1Q8NHW4 92 aa9.71□□□□□ -0.86
TOP3A-211ENST00000581536 TPCN2Q8NHX9 752 aa9.71□□□□□ -0.86
TOP3A-211ENST00000581536 ZCCHC14Q8WYQ9 949 aaKnown RBP9.71□□□□□ -0.86
TOP3A-211ENST00000581536 HDAC11Q96DB2 347 aa9.71□□□□□ -0.86
TOP3A-211ENST00000581536 SCRN2Q96FV2 425 aa9.71□□□□□ -0.86
TOP3A-211ENST00000581536 MRFAP1L1Q96HT8 127 aa9.71□□□□□ -0.86
TOP3A-211ENST00000581536 IL12RB2Q99665 862 aa9.71□□□□□ -0.86
TOP3A-211ENST00000581536 LRRC61Q9BV99 259 aa9.71□□□□□ -0.86
TOP3A-211ENST00000581536 C1QTNF7Q9BXJ2 289 aa9.71□□□□□ -0.86
TOP3A-211ENST00000581536 ZNF395Q9H8N7 513 aaPredicted RBP9.71□□□□□ -0.86
TOP3A-211ENST00000581536 SPASTQ9UBP0 616 aa9.71□□□□□ -0.86
TOP3A-211ENST00000581536 APOBEC3BQ9UH17 382 aaKnown RBP9.71□□□□□ -0.86
TOP3A-211ENST00000581536 CD84Q9UIB8 345 aa9.71□□□□□ -0.86
TOP3A-211ENST00000581536 LCMT1Q9UIC8 334 aa9.71□□□□□ -0.86
TOP3A-211ENST00000581536 PPIL1Q9Y3C6 166 aa9.71□□□□□ -0.86
TOP3A-211ENST00000581536 PCDHGA1Q9Y5H4 931 aa9.71□□□□□ -0.86
TOP3A-211ENST00000581536 CSNK1G3Q9Y6M4 447 aa9.71□□□□□ -0.86
TOP3A-211ENST00000581536 URB1O60287 2271 aaKnown RBP9.71□□□□□ -0.86
TOP3A-211ENST00000581536 IGF2RP11717 2491 aa9.71□□□□□ -0.86
TOP3A-211ENST00000581536 CPED1A4D0V7 1026 aa9.7□□□□□ -0.86
TOP3A-211ENST00000581536 SRRM3A6NNA2 597 aaPredicted RBP9.7□□□□□ -0.86
TOP3A-211ENST00000581536 H3BM21 787 aa9.7□□□□□ -0.86
TOP3A-211ENST00000581536 APOL1O14791 398 aa9.7□□□□□ -0.86
TOP3A-211ENST00000581536 SPOPO43791 374 aa9.7□□□□□ -0.86
TOP3A-211ENST00000581536 NDUFA10O95299 355 aa9.7□□□□□ -0.86
TOP3A-211ENST00000581536 CLDN7O95471 211 aa9.7□□□□□ -0.86
TOP3A-211ENST00000581536 CTSEP14091 401 aa9.7□□□□□ -0.86
TOP3A-211ENST00000581536 PECAM1P16284 738 aaPredicted RBP9.7□□□□□ -0.86
TOP3A-211ENST00000581536 TRIM23P36406 574 aa9.7□□□□□ -0.86
TOP3A-211ENST00000581536 CD86P42081 329 aa9.7□□□□□ -0.86
TOP3A-211ENST00000581536 CDKN2BP42772 138 aa9.7□□□□□ -0.86
TOP3A-211ENST00000581536 SLC1A1P43005 524 aa9.7□□□□□ -0.86
TOP3A-211ENST00000581536 POLD2P49005 469 aa9.7□□□□□ -0.86
TOP3A-211ENST00000581536 HK3P52790 923 aa9.7□□□□□ -0.86
TOP3A-211ENST00000581536 HADHBP55084 474 aaKnown RBP9.7□□□□□ -0.86
TOP3A-211ENST00000581536 NFATC4Q14934 902 aa9.7□□□□□ -0.86
TOP3A-211ENST00000581536 TAZQ16635 292 aa9.7□□□□□ -0.86
TOP3A-211ENST00000581536 PERM1Q5SV97 790 aa9.7□□□□□ -0.86
TOP3A-211ENST00000581536 HES3Q5TGS1 186 aa9.7□□□□□ -0.86
TOP3A-211ENST00000581536 LRRC38Q5VT99 294 aa9.7□□□□□ -0.86
TOP3A-211ENST00000581536 TIGD7Q6NT04 549 aaPredicted RBP9.7□□□□□ -0.86
TOP3A-211ENST00000581536 GUSBP11Q6P575 273 aa9.7□□□□□ -0.86
TOP3A-211ENST00000581536 TECPR1Q7Z6L1 1165 aa9.7□□□□□ -0.86
TOP3A-211ENST00000581536 TMPRSS12Q86WS5 348 aa9.7□□□□□ -0.86
TOP3A-211ENST00000581536 CCDC170Q8IYT3 715 aa9.7□□□□□ -0.86
TOP3A-211ENST00000581536 FAM181AQ8N9Y4 354 aa9.7□□□□□ -0.86
TOP3A-211ENST00000581536 ACRBPQ8NEB7 543 aa9.7□□□□□ -0.86
TOP3A-211ENST00000581536 IFI44Q8TCB0 444 aa9.7□□□□□ -0.86
TOP3A-211ENST00000581536 BTN2A2Q8WVV5 523 aa9.7□□□□□ -0.86
TOP3A-211ENST00000581536 OR1E3Q8WZA6 343 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms