RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 TIMM23O14925 209 aa4.77□□□□□ -1.65
SMCHD1-205ENST00000581383 SMAD6O43541 496 aaKnown RBP4.77□□□□□ -1.65
SMCHD1-205ENST00000581383 TSPAN9O75954 239 aa4.77□□□□□ -1.65
SMCHD1-205ENST00000581383 CENPBP07199 599 aaPredicted RBP4.77□□□□□ -1.65
SMCHD1-205ENST00000581383 CYC1P08574 325 aa4.77□□□□□ -1.65
SMCHD1-205ENST00000581383 CSH1P0DML2 217 aa4.77□□□□□ -1.65
SMCHD1-205ENST00000581383 CSH2P0DML3 217 aa4.77□□□□□ -1.65
SMCHD1-205ENST00000581383 CHATP28329 748 aa4.77□□□□□ -1.65
SMCHD1-205ENST00000581383 PSMB10P40306 273 aa4.77□□□□□ -1.65
SMCHD1-205ENST00000581383 PIK3CAP42336 1068 aa4.77□□□□□ -1.65
SMCHD1-205ENST00000581383 SNX16P57768 344 aa4.77□□□□□ -1.65
SMCHD1-205ENST00000581383 ACVR2BQ13705 512 aa4.77□□□□□ -1.65
SMCHD1-205ENST00000581383 HNF4GQ14541 408 aa4.77□□□□□ -1.65
SMCHD1-205ENST00000581383 IRF3Q14653 427 aa4.77□□□□□ -1.65
SMCHD1-205ENST00000581383 NAB2Q15742 525 aa4.77□□□□□ -1.65
SMCHD1-205ENST00000581383 CDONQ4KMG0 1287 aa4.77□□□□□ -1.65
SMCHD1-205ENST00000581383 B3GNT6Q6ZMB0 384 aa4.77□□□□□ -1.65
SMCHD1-205ENST00000581383 CLEC17AQ6ZS10 378 aa4.77□□□□□ -1.65
SMCHD1-205ENST00000581383 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.77□□□□□ -1.65
SMCHD1-205ENST00000581383 TEX11Q8IYF3 940 aa4.77□□□□□ -1.65
SMCHD1-205ENST00000581383 TAGAPQ8N103 731 aa4.77□□□□□ -1.65
SMCHD1-205ENST00000581383 NME8Q8N427 588 aa4.77□□□□□ -1.65
SMCHD1-205ENST00000581383 CALML4Q96GE6 196 aa4.77□□□□□ -1.65
SMCHD1-205ENST00000581383 NCAPGQ9BPX3 1015 aa4.77□□□□□ -1.65
SMCHD1-205ENST00000581383 CENPOQ9BU64 300 aa4.77□□□□□ -1.65
SMCHD1-205ENST00000581383 MAK16Q9BXY0 300 aaKnown RBP4.77□□□□□ -1.65
SMCHD1-205ENST00000581383 RBM38Q9H0Z9 239 aaKnown RBP4.77□□□□□ -1.65
SMCHD1-205ENST00000581383 NDST4Q9H3R1 872 aa4.77□□□□□ -1.65
SMCHD1-205ENST00000581383 R3HDM2Q9Y2K5 976 aaKnown RBP4.77□□□□□ -1.65
SMCHD1-205ENST00000581383 STON1Q9Y6Q2 735 aa4.77□□□□□ -1.65
SMCHD1-205ENST00000581383 A0A1W2PQ09 198 aa4.76□□□□□ -1.65
SMCHD1-205ENST00000581383 C1orf226A1L170 272 aa4.76□□□□□ -1.65
SMCHD1-205ENST00000581383 A8MZ25 164 aa4.76□□□□□ -1.65
SMCHD1-205ENST00000581383 ASAP2O43150 1006 aa4.76□□□□□ -1.65
SMCHD1-205ENST00000581383 FIBPO43427 364 aa4.76□□□□□ -1.65
SMCHD1-205ENST00000581383 RGS14O43566 566 aa4.76□□□□□ -1.65
SMCHD1-205ENST00000581383 VNN2O95498 520 aa4.76□□□□□ -1.65
SMCHD1-205ENST00000581383 TOMM40O96008 361 aa4.76□□□□□ -1.65
SMCHD1-205ENST00000581383 RB1P06400 928 aa4.76□□□□□ -1.65
SMCHD1-205ENST00000581383 G6PDP11413 515 aa4.76□□□□□ -1.65
SMCHD1-205ENST00000581383 GABRB1P18505 474 aa4.76□□□□□ -1.65
SMCHD1-205ENST00000581383 CD58P19256 250 aa4.76□□□□□ -1.65
SMCHD1-205ENST00000581383 GPTP24298 496 aa4.76□□□□□ -1.65
SMCHD1-205ENST00000581383 GCH1P30793 250 aa4.76□□□□□ -1.65
SMCHD1-205ENST00000581383 ACSL1P33121 698 aa4.76□□□□□ -1.65
SMCHD1-205ENST00000581383 EIF2S3P41091 472 aaKnown RBP4.76□□□□□ -1.65
SMCHD1-205ENST00000581383 COMPP49747 757 aaPredicted RBP4.76□□□□□ -1.65
SMCHD1-205ENST00000581383 GPS2Q13227 327 aa4.76□□□□□ -1.65
SMCHD1-205ENST00000581383 KCTD2Q14681 263 aa4.76□□□□□ -1.65
SMCHD1-205ENST00000581383 CFAP58Q5T655 872 aa4.76□□□□□ -1.65
SMCHD1-205ENST00000581383 KIAA0930Q6ICG6 404 aaPredicted RBP4.76□□□□□ -1.65
SMCHD1-205ENST00000581383 ENOSF1Q7L5Y1 443 aa4.76□□□□□ -1.65
SMCHD1-205ENST00000581383 SHFQ7M4L6 423 aa4.76□□□□□ -1.65
SMCHD1-205ENST00000581383 TICAM1Q8IUC6 712 aa4.76□□□□□ -1.65
SMCHD1-205ENST00000581383 C1orf131Q8NDD1 294 aaKnown RBP4.76□□□□□ -1.65
SMCHD1-205ENST00000581383 ASB5Q8WWX0 329 aa4.76□□□□□ -1.65
SMCHD1-205ENST00000581383 SGCDQ92629 289 aa4.76□□□□□ -1.65
SMCHD1-205ENST00000581383 IGSF8Q969P0 613 aa4.76□□□□□ -1.65
SMCHD1-205ENST00000581383 PPP1R13BQ96KQ4 1090 aa4.76□□□□□ -1.65
SMCHD1-205ENST00000581383 NTPCRQ9BSD7 190 aaKnown RBP4.76□□□□□ -1.65
SMCHD1-205ENST00000581383 IFIH1Q9BYX4 1025 aaKnown RBP4.76□□□□□ -1.65
SMCHD1-205ENST00000581383 ESRP2Q9H6T0 727 aaKnown RBP4.76□□□□□ -1.65
SMCHD1-205ENST00000581383 HINT3Q9NQE9 182 aaKnown RBP4.76□□□□□ -1.65
SMCHD1-205ENST00000581383 IL36RNQ9UBH0 155 aa4.76□□□□□ -1.65
SMCHD1-205ENST00000581383 FBXL17Q9UF56 701 aa4.76□□□□□ -1.65
SMCHD1-205ENST00000581383 NENFQ9UMX5 172 aa4.76□□□□□ -1.65
SMCHD1-205ENST00000581383 PAM16Q9Y3D7 125 aa4.76□□□□□ -1.65
SMCHD1-205ENST00000581383 PTGDR2Q9Y5Y4 395 aa4.76□□□□□ -1.65
SMCHD1-205ENST00000581383 MAU2Q9Y6X3 613 aa4.76□□□□□ -1.65
SMCHD1-205ENST00000581383 A0A1B0GVM2 712 aa4.75□□□□□ -1.65
SMCHD1-205ENST00000581383 INAFM1C9JVW0 142 aa4.75□□□□□ -1.65
SMCHD1-205ENST00000581383 PRSS44E7EML9 344 aa4.75□□□□□ -1.65
SMCHD1-205ENST00000581383 H3BQ06 376 aaPredicted RBP4.75□□□□□ -1.65
SMCHD1-205ENST00000581383 VCYO14598 125 aa4.75□□□□□ -1.65
SMCHD1-205ENST00000581383 SCAMP1O15126 338 aa4.75□□□□□ -1.65
SMCHD1-205ENST00000581383 SPRY3O43610 288 aa4.75□□□□□ -1.65
SMCHD1-205ENST00000581383 HCRTR2O43614 444 aa4.75□□□□□ -1.65
SMCHD1-205ENST00000581383 FTCDO95954 541 aa4.75□□□□□ -1.65
SMCHD1-205ENST00000581383 RFX2P48378 723 aa4.75□□□□□ -1.65
SMCHD1-205ENST00000581383 METAP2P50579 478 aaKnown RBP eCLIP4.75□□□□□ -1.65
SMCHD1-205ENST00000581383 IKQ13123 557 aaPredicted RBP4.75□□□□□ -1.65
SMCHD1-205ENST00000581383 KRT24Q2M2I5 525 aa4.75□□□□□ -1.65
SMCHD1-205ENST00000581383 EIF2S3LQ2VIR3 472 aaKnown RBP4.75□□□□□ -1.65
SMCHD1-205ENST00000581383 SIGIRRQ6IA17 410 aa4.75□□□□□ -1.65
SMCHD1-205ENST00000581383 TYW3Q6IPR3 259 aaKnown RBP4.75□□□□□ -1.65
SMCHD1-205ENST00000581383 PQLC2Q6ZP29 291 aa4.75□□□□□ -1.65
SMCHD1-205ENST00000581383 FBXL14Q8N1E6 418 aa4.75□□□□□ -1.65
SMCHD1-205ENST00000581383 SPATA6LQ8N4H0 392 aa4.75□□□□□ -1.65
SMCHD1-205ENST00000581383 AADATQ8N5Z0 425 aa4.75□□□□□ -1.65
SMCHD1-205ENST00000581383 RRNAD1Q96FB5 475 aaKnown RBP4.75□□□□□ -1.65
SMCHD1-205ENST00000581383 ELMOD3Q96FG2 381 aa4.75□□□□□ -1.65
SMCHD1-205ENST00000581383 HARBI1Q96MB7 349 aa4.75□□□□□ -1.65
SMCHD1-205ENST00000581383 SRSF8Q9BRL6 282 aaKnown RBP4.75□□□□□ -1.65
SMCHD1-205ENST00000581383 MXD3Q9BW11 206 aa4.75□□□□□ -1.65
SMCHD1-205ENST00000581383 SF3B5Q9BWJ5 86 aaKnown RBP4.75□□□□□ -1.65
SMCHD1-205ENST00000581383 KCNN2Q9H2S1 579 aa4.75□□□□□ -1.65
SMCHD1-205ENST00000581383 SLCO5A1Q9H2Y9 848 aa4.75□□□□□ -1.65
SMCHD1-205ENST00000581383 SETD4Q9NVD3 440 aa4.75□□□□□ -1.65
SMCHD1-205ENST00000581383 RPS6KA6Q9UK32 745 aa4.75□□□□□ -1.65
SMCHD1-205ENST00000581383 FZD10Q9ULW2 581 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms