RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 PTPN13Q12923 2485 aa10.59□□□□□ -0.71
RFFL-209ENST00000581265 TTC24A2A3L6 582 aaPredicted RBP10.59□□□□□ -0.71
RFFL-209ENST00000581265 LRRC53A6NM62 1247 aa10.59□□□□□ -0.71
RFFL-209ENST00000581265 C9orf172C9J069 976 aa10.59□□□□□ -0.71
RFFL-209ENST00000581265 PSMD11O00231 422 aa10.59□□□□□ -0.71
RFFL-209ENST00000581265 ZW10O43264 779 aa10.59□□□□□ -0.71
RFFL-209ENST00000581265 AMPD1P23109 780 aa10.59□□□□□ -0.71
RFFL-209ENST00000581265 IL1R2P27930 398 aa10.59□□□□□ -0.71
RFFL-209ENST00000581265 ALDH4A1P30038 563 aa10.59□□□□□ -0.71
RFFL-209ENST00000581265 VIPR1P32241 457 aa10.59□□□□□ -0.71
RFFL-209ENST00000581265 PRKCIP41743 596 aa10.59□□□□□ -0.71
RFFL-209ENST00000581265 GPR3P46089 330 aa10.59□□□□□ -0.71
RFFL-209ENST00000581265 OR1D5P58170 312 aa10.59□□□□□ -0.71
RFFL-209ENST00000581265 TLE1Q04724 770 aa10.59□□□□□ -0.71
RFFL-209ENST00000581265 DPTQ07507 201 aa10.59□□□□□ -0.71
RFFL-209ENST00000581265 ILF3Q12906 894 aaKnown RBP eCLIP10.59□□□□□ -0.717e-7■■□□□ 13.2
RFFL-209ENST00000581265 SRSF6Q13247 344 aaKnown RBP10.59□□□□□ -0.71
RFFL-209ENST00000581265 SQSTM1Q13501 440 aa10.59□□□□□ -0.71
RFFL-209ENST00000581265 ZNF235Q14590 738 aa10.59□□□□□ -0.71
RFFL-209ENST00000581265 C16orf72Q14CZ0 275 aa10.59□□□□□ -0.71
RFFL-209ENST00000581265 MANEAQ5SRI9 462 aa10.59□□□□□ -0.71
RFFL-209ENST00000581265 PHF19Q5T6S3 580 aa10.59□□□□□ -0.71
RFFL-209ENST00000581265 Q6ZVL8 140 aa10.59□□□□□ -0.71
RFFL-209ENST00000581265 ZNF571Q7Z3V5 609 aaPredicted RBP10.59□□□□□ -0.71
RFFL-209ENST00000581265 HSD11B1LQ7Z5J1 315 aa10.59□□□□□ -0.71
RFFL-209ENST00000581265 POLNQ7Z5Q5 900 aa10.59□□□□□ -0.71
RFFL-209ENST00000581265 HEATR4Q86WZ0 1026 aa10.59□□□□□ -0.71
RFFL-209ENST00000581265 ZFAND4Q86XD8 727 aa10.59□□□□□ -0.71
RFFL-209ENST00000581265 PGBD5Q8N414 524 aa10.59□□□□□ -0.71
RFFL-209ENST00000581265 ZDHHC1Q8WTX9 485 aa10.59□□□□□ -0.71
RFFL-209ENST00000581265 NUS1Q96E22 293 aa10.59□□□□□ -0.71
RFFL-209ENST00000581265 DTD2Q96FN9 168 aa10.59□□□□□ -0.71
RFFL-209ENST00000581265 SCARF2Q96GP6 870 aaPredicted RBP10.59□□□□□ -0.71
RFFL-209ENST00000581265 MCCC1Q96RQ3 725 aaPredicted RBP10.59□□□□□ -0.71
RFFL-209ENST00000581265 SEMA3CQ99985 751 aa10.59□□□□□ -0.71
RFFL-209ENST00000581265 MGME1Q9BQP7 344 aa10.59□□□□□ -0.71
RFFL-209ENST00000581265 RDH14Q9HBH5 336 aa10.59□□□□□ -0.71
RFFL-209ENST00000581265 MRPL47Q9HD33 250 aaKnown RBP10.59□□□□□ -0.71
RFFL-209ENST00000581265 STARD5Q9NSY2 213 aa10.59□□□□□ -0.71
RFFL-209ENST00000581265 KCNK4Q9NYG8 393 aa10.59□□□□□ -0.71
RFFL-209ENST00000581265 FOXJ2Q9P0K8 574 aa10.59□□□□□ -0.71
RFFL-209ENST00000581265 TAAR2Q9P1P5 351 aa10.59□□□□□ -0.71
RFFL-209ENST00000581265 SLC17A4Q9Y2C5 497 aa10.59□□□□□ -0.71
RFFL-209ENST00000581265 ST14Q9Y5Y6 855 aa10.59□□□□□ -0.71
RFFL-209ENST00000581265 SCINQ9Y6U3 715 aa10.59□□□□□ -0.71
RFFL-209ENST00000581265 ANKRD36A6QL64 1941 aa10.58□□□□□ -0.72
RFFL-209ENST00000581265 USP9XQ93008 2570 aaPredicted RBP10.58□□□□□ -0.72
RFFL-209ENST00000581265 RHPN2P1A8MT19 583 aa10.58□□□□□ -0.72
RFFL-209ENST00000581265 H3BRJ5 948 aa10.58□□□□□ -0.72
RFFL-209ENST00000581265 DDX3XO00571 662 aaKnown RBP eCLIP10.58□□□□□ -0.723e-14■■■□□ 16.2
RFFL-209ENST00000581265 HGSO14964 777 aaPredicted RBP10.58□□□□□ -0.72
RFFL-209ENST00000581265 PGLSO95336 258 aa10.58□□□□□ -0.72
RFFL-209ENST00000581265 ECEL1O95672 775 aa10.58□□□□□ -0.72
RFFL-209ENST00000581265 MYBL1P10243 752 aa10.58□□□□□ -0.72
RFFL-209ENST00000581265 CYP2A6P11509 494 aaPredicted RBP10.58□□□□□ -0.72
RFFL-209ENST00000581265 ITGB6P18564 788 aa10.58□□□□□ -0.72
RFFL-209ENST00000581265 LHCGRP22888 699 aa10.58□□□□□ -0.72
RFFL-209ENST00000581265 CD1CP29017 333 aa10.58□□□□□ -0.72
RFFL-209ENST00000581265 ARL4AP40617 200 aa10.58□□□□□ -0.72
RFFL-209ENST00000581265 ETV3P41162 512 aa10.58□□□□□ -0.72
RFFL-209ENST00000581265 MAPK10P53779 464 aa10.58□□□□□ -0.72
RFFL-209ENST00000581265 MAZP56270 477 aaKnown RBP10.58□□□□□ -0.72
RFFL-209ENST00000581265 CDK3Q00526 305 aa10.58□□□□□ -0.72
RFFL-209ENST00000581265 TRAF2Q12933 501 aa10.58□□□□□ -0.72
RFFL-209ENST00000581265 PEX6Q13608 980 aa10.58□□□□□ -0.72
RFFL-209ENST00000581265 ASIC2Q16515 512 aa10.58□□□□□ -0.72
RFFL-209ENST00000581265 AMZ1Q400G9 498 aa10.58□□□□□ -0.72
RFFL-209ENST00000581265 MARC1Q5VT66 337 aa10.58□□□□□ -0.72
RFFL-209ENST00000581265 TMCO3Q6UWJ1 677 aa10.58□□□□□ -0.72
RFFL-209ENST00000581265 TECPR1Q7Z6L1 1165 aa10.58□□□□□ -0.72
RFFL-209ENST00000581265 NLRP8Q86W28 1048 aa10.58□□□□□ -0.72
RFFL-209ENST00000581265 NAGSQ8N159 534 aa10.58□□□□□ -0.72
RFFL-209ENST00000581265 BBS5Q8N3I7 341 aa10.58□□□□□ -0.72
RFFL-209ENST00000581265 ZSCAN1Q8NBB4 408 aa10.58□□□□□ -0.72
RFFL-209ENST00000581265 PDCD6IPQ8WUM4 868 aaKnown RBP10.58□□□□□ -0.72
RFFL-209ENST00000581265 EXTL1Q92935 676 aa10.58□□□□□ -0.72
RFFL-209ENST00000581265 CSPG4P5Q96PW8 444 aa10.58□□□□□ -0.72
RFFL-209ENST00000581265 ISCUQ9H1K1 167 aa10.58□□□□□ -0.72
RFFL-209ENST00000581265 ETNK2Q9NVF9 386 aa10.58□□□□□ -0.72
RFFL-209ENST00000581265 AKAP7Q9P0M2 348 aaPredicted RBP10.58□□□□□ -0.72
RFFL-209ENST00000581265 SUFUQ9UMX1 484 aa10.58□□□□□ -0.72
RFFL-209ENST00000581265 PCDHGA4Q9Y5G9 962 aa10.58□□□□□ -0.72
RFFL-209ENST00000581265 PCDHGA3Q9Y5H0 932 aa10.58□□□□□ -0.72
RFFL-209ENST00000581265 IGHV5-10-1A0A0J9YXX1 117 aa10.57□□□□□ -0.72
RFFL-209ENST00000581265 NPIPB15A6NHN6 443 aaPredicted RBP10.57□□□□□ -0.72
RFFL-209ENST00000581265 AGRPO00253 132 aa10.57□□□□□ -0.72
RFFL-209ENST00000581265 PPM1DO15297 605 aa10.57□□□□□ -0.72
RFFL-209ENST00000581265 PPFIA2O75334 1257 aa10.57□□□□□ -0.72
RFFL-209ENST00000581265 CPP00450 1065 aa10.57□□□□□ -0.72
RFFL-209ENST00000581265 IVLP07476 585 aa10.57□□□□□ -0.72
RFFL-209ENST00000581265 RARAP10276 462 aa10.57□□□□□ -0.72
RFFL-209ENST00000581265 CCL4P13236 92 aa10.57□□□□□ -0.72
RFFL-209ENST00000581265 AK4P27144 223 aaPredicted RBP10.57□□□□□ -0.72
RFFL-209ENST00000581265 ADCY8P40145 1251 aa10.57□□□□□ -0.72
RFFL-209ENST00000581265 GNPDA1P46926 289 aa10.57□□□□□ -0.72
RFFL-209ENST00000581265 POLD2P49005 469 aa10.57□□□□□ -0.72
RFFL-209ENST00000581265 LIMK2P53671 638 aa10.57□□□□□ -0.72
RFFL-209ENST00000581265 CDH6P55285 790 aa10.57□□□□□ -0.72
RFFL-209ENST00000581265 CTBSQ01459 385 aa10.57□□□□□ -0.72
RFFL-209ENST00000581265 TRA2AQ13595 282 aaKnown RBP eCLIP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms