RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 OAS2P29728 719 aaKnown RBP12.19□□□□□ -0.46
CDK5RAP3-216ENST00000579853 GNPDA1P46926 289 aa12.19□□□□□ -0.46
CDK5RAP3-216ENST00000579853 PPM1FP49593 454 aaPredicted RBP12.19□□□□□ -0.46
CDK5RAP3-216ENST00000579853 NDST2P52849 883 aa12.19□□□□□ -0.46
CDK5RAP3-216ENST00000579853 HDAC4P56524 1084 aa12.19□□□□□ -0.46
CDK5RAP3-216ENST00000579853 CTBSQ01459 385 aa12.19□□□□□ -0.46
CDK5RAP3-216ENST00000579853 PDAP1Q13442 181 aaKnown RBP12.19□□□□□ -0.46
CDK5RAP3-216ENST00000579853 MAP7Q14244 749 aa12.19□□□□□ -0.46
CDK5RAP3-216ENST00000579853 MAN2A1Q16706 1144 aa12.19□□□□□ -0.46
CDK5RAP3-216ENST00000579853 RAB6CQ53S08 254 aa12.19□□□□□ -0.46
CDK5RAP3-216ENST00000579853 NKAIN2Q5VXU1 208 aa12.19□□□□□ -0.46
CDK5RAP3-216ENST00000579853 NAA35Q5VZE5 725 aa12.19□□□□□ -0.46
CDK5RAP3-216ENST00000579853 WDR74Q6RFH5 385 aaPredicted RBP12.19□□□□□ -0.46
CDK5RAP3-216ENST00000579853 CCDC13Q8IYE1 715 aa12.19□□□□□ -0.46
CDK5RAP3-216ENST00000579853 ESX1Q8N693 406 aa12.19□□□□□ -0.46
CDK5RAP3-216ENST00000579853 EFCAB3Q8N7B9 438 aa12.19□□□□□ -0.46
CDK5RAP3-216ENST00000579853 GALNT11Q8NCW6 608 aa12.19□□□□□ -0.46
CDK5RAP3-216ENST00000579853 GPT2Q8TD30 523 aa12.19□□□□□ -0.46
CDK5RAP3-216ENST00000579853 FRMD8Q9BZ67 464 aaPredicted RBP12.19□□□□□ -0.46
CDK5RAP3-216ENST00000579853 RAB6CQ9H0N0 254 aa12.19□□□□□ -0.46
CDK5RAP3-216ENST00000579853 PDFQ9HBH1 243 aa12.19□□□□□ -0.46
CDK5RAP3-216ENST00000579853 IGSF5Q9NSI5 407 aa12.19□□□□□ -0.46
CDK5RAP3-216ENST00000579853 SUFUQ9UMX1 484 aa12.19□□□□□ -0.46
CDK5RAP3-216ENST00000579853 TP53TG5Q9Y2B4 290 aa12.19□□□□□ -0.46
CDK5RAP3-216ENST00000579853 ARHGAP42A6NI28 874 aa12.18□□□□□ -0.46
CDK5RAP3-216ENST00000579853 CREB3O43889 395 aa12.18□□□□□ -0.46
CDK5RAP3-216ENST00000579853 PALMO75781 387 aa12.18□□□□□ -0.46
CDK5RAP3-216ENST00000579853 IVLP07476 585 aa12.18□□□□□ -0.46
CDK5RAP3-216ENST00000579853 MMEP08473 750 aa12.18□□□□□ -0.46
CDK5RAP3-216ENST00000579853 KRT7P08729 469 aa12.18□□□□□ -0.46
CDK5RAP3-216ENST00000579853 DESP17661 470 aa12.18□□□□□ -0.46
CDK5RAP3-216ENST00000579853 MPSTP25325 297 aa12.18□□□□□ -0.46
CDK5RAP3-216ENST00000579853 AK4P27144 223 aaPredicted RBP12.18□□□□□ -0.46
CDK5RAP3-216ENST00000579853 CSF2RBP32927 897 aa12.18□□□□□ -0.46
CDK5RAP3-216ENST00000579853 ACTR1BP42025 376 aa12.18□□□□□ -0.46
CDK5RAP3-216ENST00000579853 FASLGP48023 281 aa12.18□□□□□ -0.46
CDK5RAP3-216ENST00000579853 RENBPP51606 427 aa12.18□□□□□ -0.46
CDK5RAP3-216ENST00000579853 ACTR1AP61163 376 aa12.18□□□□□ -0.46
CDK5RAP3-216ENST00000579853 AP1S1P61966 158 aa12.18□□□□□ -0.46
CDK5RAP3-216ENST00000579853 C16orf46Q6P387 395 aa12.18□□□□□ -0.46
CDK5RAP3-216ENST00000579853 ARHGAP22Q7Z5H3 698 aa12.18□□□□□ -0.46
CDK5RAP3-216ENST00000579853 NOP9Q86U38 636 aaKnown RBP12.18□□□□□ -0.46
CDK5RAP3-216ENST00000579853 HEATR4Q86WZ0 1026 aa12.18□□□□□ -0.46
CDK5RAP3-216ENST00000579853 FAM114A1Q8IWE2 563 aa12.18□□□□□ -0.46
CDK5RAP3-216ENST00000579853 EPS8L1Q8TE68 723 aa12.18□□□□□ -0.46
CDK5RAP3-216ENST00000579853 SSC4DQ8WTU2 575 aa12.18□□□□□ -0.46
CDK5RAP3-216ENST00000579853 PATE1Q8WXA2 126 aa12.18□□□□□ -0.46
CDK5RAP3-216ENST00000579853 COQ10AQ96MF6 247 aa12.18□□□□□ -0.46
CDK5RAP3-216ENST00000579853 SLC38A3Q99624 504 aa12.18□□□□□ -0.46
CDK5RAP3-216ENST00000579853 MAGEB5Q9BZ81 275 aa12.18□□□□□ -0.46
CDK5RAP3-216ENST00000579853 NDST4Q9H3R1 872 aa12.18□□□□□ -0.46
CDK5RAP3-216ENST00000579853 STN1Q9H668 368 aaKnown RBP12.18□□□□□ -0.46
CDK5RAP3-216ENST00000579853 SUDS3Q9H7L9 328 aaPredicted RBP12.18□□□□□ -0.46
CDK5RAP3-216ENST00000579853 CUEDC1Q9NWM3 386 aaPredicted RBP12.18□□□□□ -0.46
CDK5RAP3-216ENST00000579853 SLC17A4Q9Y2C5 497 aa12.18□□□□□ -0.46
CDK5RAP3-216ENST00000579853 KCNMB2Q9Y691 235 aa12.18□□□□□ -0.46
CDK5RAP3-216ENST00000579853 APCP25054 2843 aa12.18□□□□□ -0.46
CDK5RAP3-216ENST00000579853 TACC2O95359 2948 aa12.17□□□□□ -0.46
CDK5RAP3-216ENST00000579853 OTOGQ6ZRI0 2925 aa12.17□□□□□ -0.46
CDK5RAP3-216ENST00000579853 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.17□□□□□ -0.46
CDK5RAP3-216ENST00000579853 ANKRD62A6NC57 917 aa12.17□□□□□ -0.46
CDK5RAP3-216ENST00000579853 J3KR12 359 aa12.17□□□□□ -0.46
CDK5RAP3-216ENST00000579853 PSMD11O00231 422 aa12.17□□□□□ -0.46
CDK5RAP3-216ENST00000579853 POLR1CO15160 346 aaPredicted RBP12.17□□□□□ -0.46
CDK5RAP3-216ENST00000579853 STK17BO94768 372 aa12.17□□□□□ -0.46
CDK5RAP3-216ENST00000579853 GM2AP17900 193 aa12.17□□□□□ -0.46
CDK5RAP3-216ENST00000579853 GPD1P21695 349 aa12.17□□□□□ -0.46
CDK5RAP3-216ENST00000579853 ADCY8P40145 1251 aa12.17□□□□□ -0.46
CDK5RAP3-216ENST00000579853 STAT5AP42229 794 aa12.17□□□□□ -0.46
CDK5RAP3-216ENST00000579853 MLLT10P55197 1068 aa12.17□□□□□ -0.46
CDK5RAP3-216ENST00000579853 CDK3Q00526 305 aa12.17□□□□□ -0.46
CDK5RAP3-216ENST00000579853 LRP8Q14114 963 aa12.17□□□□□ -0.46
CDK5RAP3-216ENST00000579853 RFTN1Q14699 578 aaPredicted RBP12.17□□□□□ -0.46
CDK5RAP3-216ENST00000579853 TPD52L1Q16890 204 aaPredicted RBP12.17□□□□□ -0.46
CDK5RAP3-216ENST00000579853 KLHDC7AQ5VTJ3 777 aa12.17□□□□□ -0.46
CDK5RAP3-216ENST00000579853 TRIM72Q6ZMU5 477 aa12.17□□□□□ -0.46
CDK5RAP3-216ENST00000579853 ASB18Q6ZVZ8 466 aa12.17□□□□□ -0.46
CDK5RAP3-216ENST00000579853 UNC5BQ8IZJ1 945 aa12.17□□□□□ -0.46
CDK5RAP3-216ENST00000579853 PYROXD2Q8N2H3 581 aa12.17□□□□□ -0.46
CDK5RAP3-216ENST00000579853 LZTR1Q8N653 840 aa12.17□□□□□ -0.46
CDK5RAP3-216ENST00000579853 TSEN2Q8NCE0 465 aaKnown RBP12.17□□□□□ -0.46
CDK5RAP3-216ENST00000579853 JOSD2Q8TAC2 188 aa12.17□□□□□ -0.46
CDK5RAP3-216ENST00000579853 SH3KBP1Q96B97 665 aa12.17□□□□□ -0.46
CDK5RAP3-216ENST00000579853 CTRCQ99895 268 aa12.17□□□□□ -0.46
CDK5RAP3-216ENST00000579853 SELENOOQ9BVL4 669 aa12.17□□□□□ -0.46
CDK5RAP3-216ENST00000579853 CINPQ9BW66 212 aaPredicted RBP12.17□□□□□ -0.46
CDK5RAP3-216ENST00000579853 STK33Q9BYT3 514 aa12.17□□□□□ -0.46
CDK5RAP3-216ENST00000579853 EPB41L1Q9H4G0 881 aa12.17□□□□□ -0.46
CDK5RAP3-216ENST00000579853 LRRC19Q9H756 370 aa12.17□□□□□ -0.46
CDK5RAP3-216ENST00000579853 TMEM9Q9P0T7 183 aa12.17□□□□□ -0.46
CDK5RAP3-216ENST00000579853 B4GALT6Q9UBX8 382 aa12.17□□□□□ -0.46
CDK5RAP3-216ENST00000579853 POLHQ9Y253 713 aa12.17□□□□□ -0.46
CDK5RAP3-216ENST00000579853 FHOD1Q9Y613 1164 aa12.17□□□□□ -0.46
CDK5RAP3-216ENST00000579853 MED13Q9UHV7 2174 aa12.16□□□□□ -0.46
CDK5RAP3-216ENST00000579853 FAM170AA1A519 330 aa12.16□□□□□ -0.46
CDK5RAP3-216ENST00000579853 EIF3CLB5ME19 914 aaKnown RBP12.16□□□□□ -0.46
CDK5RAP3-216ENST00000579853 TRAFD1O14545 582 aaPredicted RBP12.16□□□□□ -0.46
CDK5RAP3-216ENST00000579853 INPP4BO15327 924 aa12.16□□□□□ -0.46
CDK5RAP3-216ENST00000579853 RFPL1O75677 317 aa12.16□□□□□ -0.46
CDK5RAP3-216ENST00000579853 DLGAP3O95886 979 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms