RNA–Protein interactions for RNA: ENST00000579638.5

PPP4R1-214, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-214ENST00000579638 EFEMP1Q12805 493 aa7.09□□□□□ -1.27
PPP4R1-214ENST00000579638 SRSF6Q13247 344 aaKnown RBP7.09□□□□□ -1.27
PPP4R1-214ENST00000579638 CA9Q16790 459 aa7.09□□□□□ -1.27
PPP4R1-214ENST00000579638 CDO1Q16878 200 aa7.09□□□□□ -1.27
PPP4R1-214ENST00000579638 SLC25A52Q3SY17 297 aa7.09□□□□□ -1.27
PPP4R1-214ENST00000579638 ATP13A4Q4VNC1 1196 aa7.09□□□□□ -1.27
PPP4R1-214ENST00000579638 TMEM201Q5SNT2 666 aa7.09□□□□□ -1.27
PPP4R1-214ENST00000579638 ZBTB37Q5TC79 503 aa7.09□□□□□ -1.27
PPP4R1-214ENST00000579638 C11orf63Q6NUN7 778 aa7.09□□□□□ -1.27
PPP4R1-214ENST00000579638 PPP1R2P3Q6NXS1 205 aa7.09□□□□□ -1.27
PPP4R1-214ENST00000579638 MSANTD2Q6P1R3 559 aa7.09□□□□□ -1.27
PPP4R1-214ENST00000579638 DCUN1D2Q6PH85 259 aa7.09□□□□□ -1.27
PPP4R1-214ENST00000579638 SYT10Q6XYQ8 523 aa7.09□□□□□ -1.27
PPP4R1-214ENST00000579638 BEND5Q7L4P6 421 aa7.09□□□□□ -1.27
PPP4R1-214ENST00000579638 ARCQ7LC44 396 aa7.09□□□□□ -1.27
PPP4R1-214ENST00000579638 RHOT2Q8IXI1 618 aa7.09□□□□□ -1.27
PPP4R1-214ENST00000579638 SLC35F6Q8N357 371 aa7.09□□□□□ -1.27
PPP4R1-214ENST00000579638 FAM26EQ8N5C1 309 aa7.09□□□□□ -1.27
PPP4R1-214ENST00000579638 CCDC185Q8N715 623 aa7.09□□□□□ -1.27
PPP4R1-214ENST00000579638 FAM169BQ8N8A8 192 aa7.09□□□□□ -1.27
PPP4R1-214ENST00000579638 NIPA2Q8N8Q9 360 aa7.09□□□□□ -1.27
PPP4R1-214ENST00000579638 MSANTD4Q8NCY6 345 aa7.09□□□□□ -1.27
PPP4R1-214ENST00000579638 FAM172AQ8WUF8 416 aa7.09□□□□□ -1.27
PPP4R1-214ENST00000579638 CYB5D2Q8WUJ1 264 aa7.09□□□□□ -1.27
PPP4R1-214ENST00000579638 KRT35Q92764 455 aa7.09□□□□□ -1.27
PPP4R1-214ENST00000579638 MYEOVQ96EZ4 313 aa7.09□□□□□ -1.27
PPP4R1-214ENST00000579638 WDR24Q96S15 920 aa7.09□□□□□ -1.27
PPP4R1-214ENST00000579638 TRIM55Q9BYV6 548 aa7.09□□□□□ -1.27
PPP4R1-214ENST00000579638 MRPL47Q9HD33 250 aaKnown RBP7.09□□□□□ -1.27
PPP4R1-214ENST00000579638 ABCC13Q9NSE7 274 aa7.09□□□□□ -1.27
PPP4R1-214ENST00000579638 CHCHD3Q9NX63 227 aaKnown RBP7.09□□□□□ -1.27
PPP4R1-214ENST00000579638 PSD3Q9NYI0 1048 aa7.09□□□□□ -1.27
PPP4R1-214ENST00000579638 CLIC5Q9NZA1 410 aa7.09□□□□□ -1.27
PPP4R1-214ENST00000579638 UVRAGQ9P2Y5 699 aa7.09□□□□□ -1.27
PPP4R1-214ENST00000579638 XPO7Q9UIA9 1087 aaKnown RBP7.09□□□□□ -1.27
PPP4R1-214ENST00000579638 SNX10Q9Y5X0 201 aa7.09□□□□□ -1.27
PPP4R1-214ENST00000579638 ALG6Q9Y672 507 aa7.09□□□□□ -1.27
PPP4R1-214ENST00000579638 SCINQ9Y6U3 715 aa7.09□□□□□ -1.27
PPP4R1-214ENST00000579638 CRYBG3Q68DQ2 2970 aa7.09□□□□□ -1.27
PPP4R1-214ENST00000579638 SDK2Q58EX2 2172 aa7.09□□□□□ -1.27
PPP4R1-214ENST00000579638 LRBAP50851 2863 aa7.09□□□□□ -1.27
PPP4R1-214ENST00000579638 SYNJ2BP-COX16A0A087WUM0 186 aa7.08□□□□□ -1.28
PPP4R1-214ENST00000579638 LY6G6EA0A0G2JKS1 128 aa7.08□□□□□ -1.28
PPP4R1-214ENST00000579638 C9orf172C9J069 976 aa7.08□□□□□ -1.28
PPP4R1-214ENST00000579638 M0QYT0 321 aa7.08□□□□□ -1.28
PPP4R1-214ENST00000579638 IRAK2O43187 625 aa7.08□□□□□ -1.28
PPP4R1-214ENST00000579638 KLF4O43474 513 aa7.08□□□□□ -1.28
PPP4R1-214ENST00000579638 TIMM44O43615 452 aa7.08□□□□□ -1.28
PPP4R1-214ENST00000579638 TRUB2O95900 331 aaKnown RBP7.08□□□□□ -1.28
PPP4R1-214ENST00000579638 IGLV3-27P01718 113 aa7.08□□□□□ -1.28
PPP4R1-214ENST00000579638 ITGB2P05107 769 aa7.08□□□□□ -1.28
PPP4R1-214ENST00000579638 HMBSP08397 361 aa7.08□□□□□ -1.28
PPP4R1-214ENST00000579638 GIMD1P0DJR0 217 aa7.08□□□□□ -1.28
PPP4R1-214ENST00000579638 CKMT1AP12532 417 aa7.08□□□□□ -1.28
PPP4R1-214ENST00000579638 COL8A1P27658 744 aa7.08□□□□□ -1.28
PPP4R1-214ENST00000579638 MIPP30301 263 aa7.08□□□□□ -1.28
PPP4R1-214ENST00000579638 SDC4P31431 198 aa7.08□□□□□ -1.28
PPP4R1-214ENST00000579638 NRG1Q02297 640 aaPredicted RBP7.08□□□□□ -1.28
PPP4R1-214ENST00000579638 NME3Q13232 169 aa7.08□□□□□ -1.28
PPP4R1-214ENST00000579638 E2F5Q15329 346 aa7.08□□□□□ -1.28
PPP4R1-214ENST00000579638 ISXQ2M1V0 245 aa7.08□□□□□ -1.28
PPP4R1-214ENST00000579638 FNDC3BQ53EP0 1204 aaKnown RBP7.08□□□□□ -1.28
PPP4R1-214ENST00000579638 ZNF776Q68DI1 518 aaPredicted RBP7.08□□□□□ -1.28
PPP4R1-214ENST00000579638 AADACL2Q6P093 401 aa7.08□□□□□ -1.28
PPP4R1-214ENST00000579638 USP30Q70CQ3 517 aa7.08□□□□□ -1.28
PPP4R1-214ENST00000579638 USP53Q70EK8 1073 aa7.08□□□□□ -1.28
PPP4R1-214ENST00000579638 NT5DC3Q86UY8 548 aa7.08□□□□□ -1.28
PPP4R1-214ENST00000579638 FAM131BQ86XD5 332 aa7.08□□□□□ -1.28
PPP4R1-214ENST00000579638 OXR1Q8N573 874 aa7.08□□□□□ -1.28
PPP4R1-214ENST00000579638 RNF10Q8N5U6 811 aaKnown RBP7.08□□□□□ -1.28
PPP4R1-214ENST00000579638 OR4C6Q8NH72 309 aa7.08□□□□□ -1.28
PPP4R1-214ENST00000579638 FNIP1Q8TF40 1166 aa7.08□□□□□ -1.28
PPP4R1-214ENST00000579638 ALG3Q92685 438 aa7.08□□□□□ -1.28
PPP4R1-214ENST00000579638 SGF29Q96ES7 293 aa7.08□□□□□ -1.28
PPP4R1-214ENST00000579638 ATXN7L3BQ96GX2 97 aa7.08□□□□□ -1.28
PPP4R1-214ENST00000579638 SLC39A13Q96H72 371 aa7.08□□□□□ -1.28
PPP4R1-214ENST00000579638 SERAC1Q96JX3 654 aa7.08□□□□□ -1.28
PPP4R1-214ENST00000579638 FCRL2Q96LA5 508 aaPredicted RBP7.08□□□□□ -1.28
PPP4R1-214ENST00000579638 TM9SF2Q99805 663 aa7.08□□□□□ -1.28
PPP4R1-214ENST00000579638 HERPUD2Q9BSE4 406 aa7.08□□□□□ -1.28
PPP4R1-214ENST00000579638 CNPY3Q9BT09 278 aa7.08□□□□□ -1.28
PPP4R1-214ENST00000579638 TSGA10Q9BZW7 698 aa7.08□□□□□ -1.28
PPP4R1-214ENST00000579638 SLC25A18Q9H1K4 315 aa7.08□□□□□ -1.28
PPP4R1-214ENST00000579638 EPN3Q9H201 632 aa7.08□□□□□ -1.28
PPP4R1-214ENST00000579638 NEUROG2Q9H2A3 272 aa7.08□□□□□ -1.28
PPP4R1-214ENST00000579638 PABPC3Q9H361 631 aaKnown RBP7.08□□□□□ -1.28
PPP4R1-214ENST00000579638 MTG2Q9H4K7 406 aa7.08□□□□□ -1.28
PPP4R1-214ENST00000579638 CAAP1Q9H8G2 361 aa7.08□□□□□ -1.28
PPP4R1-214ENST00000579638 LRRC4CQ9HCJ2 640 aa7.08□□□□□ -1.28
PPP4R1-214ENST00000579638 TLR8Q9NR97 1041 aaKnown RBP7.08□□□□□ -1.28
PPP4R1-214ENST00000579638 KLHL11Q9NVR0 708 aa7.08□□□□□ -1.28
PPP4R1-214ENST00000579638 GPATCH2LQ9NWQ4 482 aa7.08□□□□□ -1.28
PPP4R1-214ENST00000579638 UCKL1Q9NWZ5 548 aa7.08□□□□□ -1.28
PPP4R1-214ENST00000579638 FBXL12Q9NXK8 326 aa7.08□□□□□ -1.28
PPP4R1-214ENST00000579638 COX16Q9P0S2 106 aa7.08□□□□□ -1.28
PPP4R1-214ENST00000579638 CPSF2Q9P2I0 782 aaKnown RBP7.08□□□□□ -1.28
PPP4R1-214ENST00000579638 PCSK1NQ9UHG2 260 aa7.08□□□□□ -1.28
PPP4R1-214ENST00000579638 RASAL2Q9UJF2 1139 aa7.08□□□□□ -1.28
PPP4R1-214ENST00000579638 U3KQA8 63 aa7.08□□□□□ -1.28
PPP4R1-214ENST00000579638 CELSR2Q9HCU4 2923 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms