RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 TCRBV21S2A2A0A5A6 115 aa3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 GOLGA6L9A6NEM1 432 aa3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 HACD1B0YJ81 288 aa3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 DFFAO00273 331 aa3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 PLK4O00444 970 aa3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 KCNK3O14649 394 aa3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 EREGO14944 169 aa3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 MID1O15344 667 aa3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 NCAM2O15394 837 aa3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 LATO43561 262 aa3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 LIASO43766 372 aa3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 ATG13O75143 517 aa3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 PIGNO95427 931 aa3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 METTL18O95568 372 aa3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 APBB3O95704 486 aa3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 IGHV4-34P06331 123 aa3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 PTMAP06454 111 aaKnown RBP3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 PDHA1P08559 390 aa3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 ATXN1LP0C7T5 689 aaKnown RBP3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 RBP3P10745 1247 aa3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 CCNB1P14635 433 aa3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 ZFXP17010 805 aaPredicted RBP3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 DESP17661 470 aa3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 TGM1P22735 817 aa3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 LHCGRP22888 699 aa3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 IVDP26440 423 aa3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 RBL1P28749 1068 aa3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 CHRNA3P32297 505 aa3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 ACSL1P33121 698 aa3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 ADRA1AP35348 466 aa3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 NBL1P41271 181 aa3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 SSR1P43307 286 aaKnown RBP3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 NR2C2P49116 596 aa3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 FNTBP49356 437 aa3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 DNA2P51530 1060 aa3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 TPMTP51580 245 aa3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 MAXP61244 160 aa3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 DSC2Q02487 901 aa3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 ZBTB16Q05516 673 aa3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 CNTN1Q12860 1018 aa3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 FGL2Q14314 439 aa3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 PDK1Q15118 436 aa3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 PTPRRQ15256 657 aa3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 RPS6KA1Q15418 735 aa3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 CST6Q15828 149 aa3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 SLC14A2Q15849 920 aa3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 CDKN3Q16667 212 aa3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 MYLK3Q32MK0 819 aa3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 CARD16Q5EG05 197 aa3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 KAZNQ674X7 775 aa3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 KCTD11Q693B1 232 aa3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 DENND5AQ6IQ26 1287 aa3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 ANO7Q6IWH7 933 aa3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 RETSATQ6NUM9 610 aa3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 ZNF534Q76KX8 674 aa3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 SRLQ86TD4 932 aa3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 PRUNE1Q86TP1 453 aa3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 LONP2Q86WA8 852 aa3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 RFX6Q8HWS3 928 aa3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 TMPRSS6Q8IU80 811 aa3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 SLC41A1Q8IVJ1 513 aa3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 MAP7D3Q8IWC1 876 aa3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 CCDC13Q8IYE1 715 aa3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 ATPAF2Q8N5M1 289 aa3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 UBL4BQ8N7F7 174 aa3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 ATP11CQ8NB49 1132 aa3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 TMIEQ8NEW7 156 aa3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 OR6K2Q8NGY2 324 aa3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 PIP4K2CQ8TBX8 421 aa3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 ACTRT1Q8TDG2 376 aa3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 UCMAQ8WVF2 138 aa3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 PIH1D2Q8WWB5 315 aa3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 SLCO2A1Q92959 643 aa3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 EXOC4Q96A65 974 aa3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 EID2BQ96D98 161 aa3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 ERLEC1Q96DZ1 483 aa3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 IMP4Q96G21 291 aaKnown RBP3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 OXNAD1Q96HP4 312 aaPredicted RBP3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 ZC3H10Q96K80 434 aaKnown RBP3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 TEKT5Q96M29 485 aa3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 ALS2CR12Q96Q35 445 aa3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 MCCC1Q96RQ3 725 aaPredicted RBP3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 NUDCD1Q96RS6 583 aa3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 MLPHQ9BV36 600 aaPredicted RBP3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 TDRD1Q9BXT4 1180 aaKnown RBP3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 FAM126AQ9BYI3 521 aaPredicted RBP3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 TPSD1Q9BZJ3 242 aa3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 BRD8Q9H0E9 1235 aa3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 DUSP15Q9H1R2 295 aaPredicted RBP3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 KCNH6Q9H252 994 aa3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 EPC1Q9H2F5 836 aa3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 PABPC3Q9H361 631 aaKnown RBP3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 EBF2Q9HAK2 575 aa3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 NOD2Q9HC29 1040 aa3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 ITM2CQ9NQX7 267 aa3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 GPR27Q9NS67 375 aa3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 SPATA6Q9NWH7 488 aaPredicted RBP3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 WSB2Q9NYS7 404 aaPredicted RBP3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 DKK3Q9UBP4 350 aa3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 UBA2Q9UBT2 640 aaPredicted RBP3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms