RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 RIOK2Q9BVS4 552 aaKnown RBP6.55□□□□□ -1.36
TRAF4-213ENST00000578917 FSD1LQ9BXM9 530 aa6.55□□□□□ -1.36
TRAF4-213ENST00000578917 TDRD1Q9BXT4 1180 aaKnown RBP6.55□□□□□ -1.36
TRAF4-213ENST00000578917 FAM83DQ9H4H8 585 aa6.55□□□□□ -1.36
TRAF4-213ENST00000578917 GRPEL1Q9HAV7 217 aa6.55□□□□□ -1.36
TRAF4-213ENST00000578917 ZFYVE1Q9HBF4 777 aa6.55□□□□□ -1.36
TRAF4-213ENST00000578917 CYP4F12Q9HCS2 524 aa6.55□□□□□ -1.36
TRAF4-213ENST00000578917 NLGN3Q9NZ94 848 aa6.55□□□□□ -1.36
TRAF4-213ENST00000578917 FAM153AQ9UHL3 310 aa6.55□□□□□ -1.36
TRAF4-213ENST00000578917 RSPH14Q9UHP6 348 aa6.55□□□□□ -1.36
TRAF4-213ENST00000578917 PACSIN2Q9UNF0 486 aaPredicted RBP6.55□□□□□ -1.36
TRAF4-213ENST00000578917 GPR34Q9UPC5 381 aa6.55□□□□□ -1.36
TRAF4-213ENST00000578917 SHOC2Q9UQ13 582 aa6.55□□□□□ -1.36
TRAF4-213ENST00000578917 EFR3BQ9Y2G0 817 aa6.55□□□□□ -1.36
TRAF4-213ENST00000578917 GPSM3Q9Y4H4 160 aa6.55□□□□□ -1.36
TRAF4-213ENST00000578917 ADGRG1Q9Y653 693 aa6.55□□□□□ -1.36
TRAF4-213ENST00000578917 CSNK1G3Q9Y6M4 447 aa6.55□□□□□ -1.36
TRAF4-213ENST00000578917 NUP205Q92621 2012 aa6.55□□□□□ -1.36
TRAF4-213ENST00000578917 FAM149AA5PLN7 773 aa6.54□□□□□ -1.36
TRAF4-213ENST00000578917 TMEM202A6NGA9 273 aa6.54□□□□□ -1.36
TRAF4-213ENST00000578917 CAPN8A6NHC0 703 aa6.54□□□□□ -1.36
TRAF4-213ENST00000578917 LMO7DNF2Z398 122 aa6.54□□□□□ -1.36
TRAF4-213ENST00000578917 TPP1O14773 563 aa6.54□□□□□ -1.36
TRAF4-213ENST00000578917 TNFRSF10CO14798 259 aa6.54□□□□□ -1.36
TRAF4-213ENST00000578917 INPP4BO15327 924 aa6.54□□□□□ -1.36
TRAF4-213ENST00000578917 FZD6O60353 706 aa6.54□□□□□ -1.36
TRAF4-213ENST00000578917 GCATO75600 419 aa6.54□□□□□ -1.36
TRAF4-213ENST00000578917 ZNF189O75820 626 aaPredicted RBP6.54□□□□□ -1.36
TRAF4-213ENST00000578917 ANXA9O76027 345 aa6.54□□□□□ -1.36
TRAF4-213ENST00000578917 NDST3O95803 873 aa6.54□□□□□ -1.36
TRAF4-213ENST00000578917 MT-CYBP00156 380 aaPredicted RBP6.54□□□□□ -1.36
TRAF4-213ENST00000578917 PYGLP06737 847 aa6.54□□□□□ -1.36
TRAF4-213ENST00000578917 MMP2P08253 660 aa6.54□□□□□ -1.36
TRAF4-213ENST00000578917 HOXC4P09017 264 aaPredicted RBP6.54□□□□□ -1.36
TRAF4-213ENST00000578917 RBP3P10745 1247 aa6.54□□□□□ -1.36
TRAF4-213ENST00000578917 MYCLP1P12525 358 aaPredicted RBP6.54□□□□□ -1.36
TRAF4-213ENST00000578917 CKMT1AP12532 417 aa6.54□□□□□ -1.36
TRAF4-213ENST00000578917 MYF5P13349 255 aa6.54□□□□□ -1.36
TRAF4-213ENST00000578917 NFKB1P19838 968 aa6.54□□□□□ -1.36
TRAF4-213ENST00000578917 LHCGRP22888 699 aa6.54□□□□□ -1.36
TRAF4-213ENST00000578917 PTPN3P26045 913 aa6.54□□□□□ -1.36
TRAF4-213ENST00000578917 RBL1P28749 1068 aa6.54□□□□□ -1.36
TRAF4-213ENST00000578917 TRIM23P36406 574 aa6.54□□□□□ -1.36
TRAF4-213ENST00000578917 PPM1FP49593 454 aaPredicted RBP6.54□□□□□ -1.36
TRAF4-213ENST00000578917 WNT3AP56704 352 aa6.54□□□□□ -1.36
TRAF4-213ENST00000578917 KIAA1024LP59773 190 aa6.54□□□□□ -1.36
TRAF4-213ENST00000578917 SHC2P98077 582 aa6.54□□□□□ -1.36
TRAF4-213ENST00000578917 E2F1Q01094 437 aa6.54□□□□□ -1.36
TRAF4-213ENST00000578917 WASHC5Q12768 1159 aa6.54□□□□□ -1.36
TRAF4-213ENST00000578917 ILF3Q12906 894 aaKnown RBP eCLIP6.54□□□□□ -1.36
TRAF4-213ENST00000578917 ILKQ13418 452 aa6.54□□□□□ -1.36
TRAF4-213ENST00000578917 NR0B2Q15466 257 aa6.54□□□□□ -1.36
TRAF4-213ENST00000578917 CDKN3Q16667 212 aa6.54□□□□□ -1.36
TRAF4-213ENST00000578917 QPCTQ16769 361 aa6.54□□□□□ -1.36
TRAF4-213ENST00000578917 SEL1L2Q5TEA6 688 aa6.54□□□□□ -1.36
TRAF4-213ENST00000578917 ALG1LQ6GMV1 187 aa6.54□□□□□ -1.36
TRAF4-213ENST00000578917 ZCCHC8Q6NZY4 707 aaKnown RBP6.54□□□□□ -1.36
TRAF4-213ENST00000578917 MARK2Q7KZI7 788 aaKnown RBP6.54□□□□□ -1.36
TRAF4-213ENST00000578917 RAB44Q7Z6P3 723 aaPredicted RBP6.54□□□□□ -1.36
TRAF4-213ENST00000578917 TMPRSS12Q86WS5 348 aa6.54□□□□□ -1.36
TRAF4-213ENST00000578917 HEATR4Q86WZ0 1026 aa6.54□□□□□ -1.36
TRAF4-213ENST00000578917 NRSN1Q8IZ57 195 aa6.54□□□□□ -1.36
TRAF4-213ENST00000578917 SDR16C5Q8N3Y7 309 aa6.54□□□□□ -1.36
TRAF4-213ENST00000578917 FAM46DQ8NEK8 389 aa6.54□□□□□ -1.36
TRAF4-213ENST00000578917 IPMKQ8NFU5 416 aa6.54□□□□□ -1.36
TRAF4-213ENST00000578917 BAHD1Q8TBE0 780 aaPredicted RBP6.54□□□□□ -1.36
TRAF4-213ENST00000578917 UBE2Q2Q8WVN8 375 aa6.54□□□□□ -1.36
TRAF4-213ENST00000578917 ALG3Q92685 438 aa6.54□□□□□ -1.36
TRAF4-213ENST00000578917 SCAMP4Q969E2 229 aa6.54□□□□□ -1.36
TRAF4-213ENST00000578917 FUBP1Q96AE4 644 aaKnown RBP6.54□□□□□ -1.36
TRAF4-213ENST00000578917 DTD2Q96FN9 168 aa6.54□□□□□ -1.36
TRAF4-213ENST00000578917 HIC2Q96JB3 615 aa6.54□□□□□ -1.36
TRAF4-213ENST00000578917 APOLD1Q96LR9 279 aa6.54□□□□□ -1.36
TRAF4-213ENST00000578917 CNTNAP3BQ96NU0 1288 aa6.54□□□□□ -1.36
TRAF4-213ENST00000578917 QKIQ96PU8 341 aaKnown RBP eCLIP6.54□□□□□ -1.36
TRAF4-213ENST00000578917 LGR4Q9BXB1 951 aa6.54□□□□□ -1.36
TRAF4-213ENST00000578917 SPATA16Q9BXB7 569 aa6.54□□□□□ -1.36
TRAF4-213ENST00000578917 CNTNAP3Q9BZ76 1288 aa6.54□□□□□ -1.36
TRAF4-213ENST00000578917 ABCG8Q9H221 673 aa6.54□□□□□ -1.36
TRAF4-213ENST00000578917 TCEAL2Q9H3H9 227 aaPredicted RBP6.54□□□□□ -1.36
TRAF4-213ENST00000578917 DPEP2Q9H4A9 486 aa6.54□□□□□ -1.36
TRAF4-213ENST00000578917 SYNDIG1Q9H7V2 258 aa6.54□□□□□ -1.36
TRAF4-213ENST00000578917 CAAP1Q9H8G2 361 aa6.54□□□□□ -1.36
TRAF4-213ENST00000578917 C10orf88Q9H8K7 445 aa6.54□□□□□ -1.36
TRAF4-213ENST00000578917 CARS2Q9HA77 564 aaKnown RBP6.54□□□□□ -1.36
TRAF4-213ENST00000578917 MAGEE1Q9HCI5 957 aa6.54□□□□□ -1.36
TRAF4-213ENST00000578917 RAD18Q9NS91 495 aa6.54□□□□□ -1.36
TRAF4-213ENST00000578917 PKD2L2Q9NZM6 624 aa6.54□□□□□ -1.36
TRAF4-213ENST00000578917 SIRPGQ9P1W8 387 aa6.54□□□□□ -1.36
TRAF4-213ENST00000578917 ZNHIT2Q9UHR6 403 aa6.54□□□□□ -1.36
TRAF4-213ENST00000578917 KLF15Q9UIH9 416 aa6.54□□□□□ -1.36
TRAF4-213ENST00000578917 KLK13Q9UKR3 277 aa6.54□□□□□ -1.36
TRAF4-213ENST00000578917 PADI4Q9UM07 663 aa6.54□□□□□ -1.36
TRAF4-213ENST00000578917 TMEM98Q9Y2Y6 226 aa6.54□□□□□ -1.36
TRAF4-213ENST00000578917 PPIL1Q9Y3C6 166 aa6.54□□□□□ -1.36
TRAF4-213ENST00000578917 MSRB2Q9Y3D2 182 aa6.54□□□□□ -1.36
TRAF4-213ENST00000578917 NEUROG3Q9Y4Z2 214 aa6.54□□□□□ -1.36
TRAF4-213ENST00000578917 PCDHGA1Q9Y5H4 931 aa6.54□□□□□ -1.36
TRAF4-213ENST00000578917 AKAP13Q12802 2813 aa6.54□□□□□ -1.36
TRAF4-213ENST00000578917 ANKRD11Q6UB99 2663 aaPredicted RBP6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms