RNA–Protein interactions for RNA: ENST00000578595.1

SS18-209, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 406 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-209ENST00000578595 SLC25A45Q8N413 288 aa19.48■□□□□ 0.71
SS18-209ENST00000578595 CCHCR1Q8TD31 782 aa19.48■□□□□ 0.71
SS18-209ENST00000578595 AP2M1Q96CW1 435 aa19.48■□□□□ 0.71
SS18-209ENST00000578595 TCEAL2Q9H3H9 227 aaPredicted RBP19.48■□□□□ 0.71
SS18-209ENST00000578595 PHPT1Q9NRX4 125 aaPredicted RBP19.48■□□□□ 0.71
SS18-209ENST00000578595 KLF15Q9UIH9 416 aa19.48■□□□□ 0.71
SS18-209ENST00000578595 PPIL1Q9Y3C6 166 aa19.48■□□□□ 0.71
SS18-209ENST00000578595 ARHGEF17Q96PE2 2063 aaPredicted RBP19.48■□□□□ 0.71
SS18-209ENST00000578595 ANKRD66B4E2M5 251 aa19.47■□□□□ 0.71
SS18-209ENST00000578595 K7ESM1 405 aa19.47■□□□□ 0.71
SS18-209ENST00000578595 SIGLEC6O43699 453 aa19.47■□□□□ 0.71
SS18-209ENST00000578595 RASGRP1O95267 797 aa19.47■□□□□ 0.71
SS18-209ENST00000578595 TRIM16O95361 564 aa19.47■□□□□ 0.71
SS18-209ENST00000578595 TOP3BO95985 862 aaKnown RBP19.47■□□□□ 0.71
SS18-209ENST00000578595 PMLP29590 882 aa19.47■□□□□ 0.71
SS18-209ENST00000578595 BLKP51451 505 aa19.47■□□□□ 0.71
SS18-209ENST00000578595 DEFB133Q30KQ1 61 aa19.47■□□□□ 0.71
SS18-209ENST00000578595 ITPRIPL1Q6GPH6 555 aa19.47■□□□□ 0.71
SS18-209ENST00000578595 KANSL1Q7Z3B3 1105 aa19.47■□□□□ 0.71
SS18-209ENST00000578595 GLRX5Q86SX6 157 aa19.47■□□□□ 0.71
SS18-209ENST00000578595 HEATR4Q86WZ0 1026 aa19.47■□□□□ 0.71
SS18-209ENST00000578595 CHCHD4Q8N4Q1 142 aa19.47■□□□□ 0.71
SS18-209ENST00000578595 TTC13Q8NBP0 860 aa19.47■□□□□ 0.71
SS18-209ENST00000578595 IPMKQ8NFU5 416 aa19.47■□□□□ 0.71
SS18-209ENST00000578595 FUBP1Q96AE4 644 aaKnown RBP19.47■□□□□ 0.71
SS18-209ENST00000578595 HES6Q96HZ4 224 aa19.47■□□□□ 0.71
SS18-209ENST00000578595 FSD1LQ9BXM9 530 aa19.47■□□□□ 0.71
SS18-209ENST00000578595 PKD2L2Q9NZM6 624 aa19.47■□□□□ 0.71
SS18-209ENST00000578595 FAM153AQ9UHL3 310 aa19.47■□□□□ 0.71
SS18-209ENST00000578595 TRHDEQ9UKU6 1024 aa19.47■□□□□ 0.71
SS18-209ENST00000578595 SHOC2Q9UQ13 582 aa19.47■□□□□ 0.71
SS18-209ENST00000578595 MYLKQ15746 1914 aa19.47■□□□□ 0.71
SS18-209ENST00000578595 TRIM38O00635 465 aa19.46■□□□□ 0.71
SS18-209ENST00000578595 ANXA6P08133 673 aa19.46■□□□□ 0.71
SS18-209ENST00000578595 CD68P34810 354 aaPredicted RBP19.46■□□□□ 0.71
SS18-209ENST00000578595 STC1P52823 247 aa19.46■□□□□ 0.71
SS18-209ENST00000578595 KIAA1024LP59773 190 aa19.46■□□□□ 0.71
SS18-209ENST00000578595 SRP54P61011 504 aaKnown RBP19.46■□□□□ 0.71
SS18-209ENST00000578595 RPS6KA1Q15418 735 aa19.46■□□□□ 0.71
SS18-209ENST00000578595 ALG11Q2TAA5 492 aa19.46■□□□□ 0.71
SS18-209ENST00000578595 DOK6Q6PKX4 331 aa19.46■□□□□ 0.71
SS18-209ENST00000578595 RFLNAQ6ZTI6 216 aa19.46■□□□□ 0.71
SS18-209ENST00000578595 SLCO6A1Q86UG4 719 aa19.46■□□□□ 0.71
SS18-209ENST00000578595 PELI3Q8N2H9 469 aa19.46■□□□□ 0.71
SS18-209ENST00000578595 SLC25A41Q8N5S1 370 aa19.46■□□□□ 0.71
SS18-209ENST00000578595 OR4C6Q8NH72 309 aa19.46■□□□□ 0.71
SS18-209ENST00000578595 PDXPQ96GD0 296 aa19.46■□□□□ 0.71
SS18-209ENST00000578595 LRRC61Q9BV99 259 aa19.46■□□□□ 0.71
SS18-209ENST00000578595 GPR63Q9BZJ6 419 aa19.46■□□□□ 0.71
SS18-209ENST00000578595 NLGN3Q9NZ94 848 aa19.46■□□□□ 0.71
SS18-209ENST00000578595 PPP2R2CQ9Y2T4 447 aa19.46■□□□□ 0.71
SS18-209ENST00000578595 PDE2AO00408 941 aaPredicted RBP19.45■□□□□ 0.7
SS18-209ENST00000578595 NDST3O95803 873 aa19.45■□□□□ 0.7
SS18-209ENST00000578595 TNFP01375 233 aa19.45■□□□□ 0.7
SS18-209ENST00000578595 MYCLP1P12525 358 aaPredicted RBP19.45■□□□□ 0.7
SS18-209ENST00000578595 HK3P52790 923 aa19.45■□□□□ 0.7
SS18-209ENST00000578595 WNT3AP56704 352 aa19.45■□□□□ 0.7
SS18-209ENST00000578595 PTSQ03393 145 aa19.45■□□□□ 0.7
SS18-209ENST00000578595 SLC14A2Q15849 920 aa19.45■□□□□ 0.7
SS18-209ENST00000578595 ALS2CLQ60I27 953 aa19.45■□□□□ 0.7
SS18-209ENST00000578595 LYSMD3Q7Z3D4 306 aa19.45■□□□□ 0.7
SS18-209ENST00000578595 OR56A4Q8NGH8 313 aa19.45■□□□□ 0.7
SS18-209ENST00000578595 SCAMP4Q969E2 229 aa19.45■□□□□ 0.7
SS18-209ENST00000578595 DUSP23Q9BVJ7 150 aa19.45■□□□□ 0.7
SS18-209ENST00000578595 SCNM1Q9BWG6 230 aa19.45■□□□□ 0.7
SS18-209ENST00000578595 LGR4Q9BXB1 951 aa19.45■□□□□ 0.7
SS18-209ENST00000578595 ABCG8Q9H221 673 aa19.45■□□□□ 0.7
SS18-209ENST00000578595 ZFYVE1Q9HBF4 777 aa19.45■□□□□ 0.7
SS18-209ENST00000578595 EVA1BQ9NVM1 165 aa19.45■□□□□ 0.7
SS18-209ENST00000578595 PNMA8BQ9ULN7 279 aaPredicted RBP19.45■□□□□ 0.7
SS18-209ENST00000578595 ZNF711Q9Y462 761 aa19.45■□□□□ 0.7
SS18-209ENST00000578595 RP1P56715 2156 aa19.44■□□□□ 0.7
SS18-209ENST00000578595 ACACBO00763 2458 aa19.44■□□□□ 0.7
SS18-209ENST00000578595 TMEM202A6NGA9 273 aa19.44■□□□□ 0.7
SS18-209ENST00000578595 RFPL3O75679 317 aa19.44■□□□□ 0.7
SS18-209ENST00000578595 PRPSAP1Q14558 356 aa19.44■□□□□ 0.7
SS18-209ENST00000578595 NYAP1Q6ZVC0 841 aa19.44■□□□□ 0.7
SS18-209ENST00000578595 TECPR1Q7Z6L1 1165 aa19.44■□□□□ 0.7
SS18-209ENST00000578595 OR1E3Q8WZA6 343 aa19.44■□□□□ 0.7
SS18-209ENST00000578595 FCRL5Q96RD9 977 aa19.44■□□□□ 0.7
SS18-209ENST00000578595 TRIB3Q96RU7 358 aa19.44■□□□□ 0.7
SS18-209ENST00000578595 RIOK2Q9BVS4 552 aaKnown RBP19.44■□□□□ 0.7
SS18-209ENST00000578595 GBA3Q9H227 469 aa19.44■□□□□ 0.7
SS18-209ENST00000578595 CYP4F12Q9HCS2 524 aa19.44■□□□□ 0.7
SS18-209ENST00000578595 FGF22Q9HCT0 170 aa19.44■□□□□ 0.7
SS18-209ENST00000578595 MRPL40Q9NQ50 206 aaKnown RBP19.44■□□□□ 0.7
SS18-209ENST00000578595 ASXL3Q9C0F0 2248 aa19.43■□□□□ 0.7
SS18-209ENST00000578595 INPP4BO15327 924 aa19.43■□□□□ 0.7
SS18-209ENST00000578595 MYF5P13349 255 aa19.43■□□□□ 0.7
SS18-209ENST00000578595 CKMT2P17540 419 aa19.43■□□□□ 0.7
SS18-209ENST00000578595 PSMB4P28070 264 aa19.43■□□□□ 0.7
SS18-209ENST00000578595 GEMP55040 296 aa19.43■□□□□ 0.7
SS18-209ENST00000578595 CDK3Q00526 305 aa19.43■□□□□ 0.7
SS18-209ENST00000578595 MPP3Q13368 585 aa19.43■□□□□ 0.7
SS18-209ENST00000578595 ELOCQ15369 112 aa19.43■□□□□ 0.7
SS18-209ENST00000578595 ANKRD20A2Q5SQ80 823 aa19.43■□□□□ 0.7
SS18-209ENST00000578595 ANKRD20A1Q5TYW2 823 aa19.43■□□□□ 0.7
SS18-209ENST00000578595 ANKRD20A3Q5VUR7 823 aa19.43■□□□□ 0.7
SS18-209ENST00000578595 DHRS13Q6UX07 377 aa19.43■□□□□ 0.7
SS18-209ENST00000578595 ARHGEF18Q6ZSZ5 1173 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms