RNA–Protein interactions for RNA: ENST00000578044.5

SMARCE1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-213ENST00000578044 KRT81Q14533 505 aa14.49□□□□□ -0.09
SMARCE1-213ENST00000578044 ACOX1Q15067 660 aa14.49□□□□□ -0.09
SMARCE1-213ENST00000578044 ASTE1Q2TB18 679 aaPredicted RBP14.49□□□□□ -0.09
SMARCE1-213ENST00000578044 SKOR2Q2VWA4 1001 aaPredicted RBP14.49□□□□□ -0.09
SMARCE1-213ENST00000578044 CCDC122Q5T0U0 273 aa14.49□□□□□ -0.09
SMARCE1-213ENST00000578044 ADAMTSL4Q6UY14 1074 aa14.49□□□□□ -0.09
SMARCE1-213ENST00000578044 PAF1Q8N7H5 531 aa14.49□□□□□ -0.09
SMARCE1-213ENST00000578044 ZNF564Q8TBZ8 553 aaPredicted RBP14.49□□□□□ -0.09
SMARCE1-213ENST00000578044 KCNE4Q8WWG9 221 aa14.49□□□□□ -0.09
SMARCE1-213ENST00000578044 CTNNBL1Q8WYA6 563 aaPredicted RBP14.49□□□□□ -0.09
SMARCE1-213ENST00000578044 CCDC74AQ96AQ1 378 aa14.49□□□□□ -0.09
SMARCE1-213ENST00000578044 HDAC11Q96DB2 347 aa14.49□□□□□ -0.09
SMARCE1-213ENST00000578044 BBC3Q96PG8 261 aaPredicted RBP14.49□□□□□ -0.09
SMARCE1-213ENST00000578044 GSDMCQ9BYG8 508 aa14.49□□□□□ -0.09
SMARCE1-213ENST00000578044 LRRN3Q9H3W5 708 aa14.49□□□□□ -0.09
SMARCE1-213ENST00000578044 PIEZO2Q9H5I5 2752 aa14.48□□□□□ -0.09
SMARCE1-213ENST00000578044 A0A0J9YYE9 177 aa14.48□□□□□ -0.09
SMARCE1-213ENST00000578044 A0A1W2PQM1 296 aa14.48□□□□□ -0.09
SMARCE1-213ENST00000578044 RGSL1A5PLK6 1076 aa14.48□□□□□ -0.09
SMARCE1-213ENST00000578044 PLD2O14939 933 aa14.48□□□□□ -0.09
SMARCE1-213ENST00000578044 NVLO15381 856 aaKnown RBP14.48□□□□□ -0.09
SMARCE1-213ENST00000578044 MTA2O94776 668 aa14.48□□□□□ -0.09
SMARCE1-213ENST00000578044 TRBC1P01850 177 aa14.48□□□□□ -0.09
SMARCE1-213ENST00000578044 CEACAM5P06731 702 aa14.48□□□□□ -0.09
SMARCE1-213ENST00000578044 CELA2BP08218 269 aaPredicted RBP14.48□□□□□ -0.09
SMARCE1-213ENST00000578044 LHCGRP22888 699 aa14.48□□□□□ -0.09
SMARCE1-213ENST00000578044 ARHGAP25P42331 645 aa14.48□□□□□ -0.09
SMARCE1-213ENST00000578044 CDK3Q00526 305 aa14.48□□□□□ -0.09
SMARCE1-213ENST00000578044 ILF3Q12906 894 aaKnown RBP eCLIP14.48□□□□□ -0.09
SMARCE1-213ENST00000578044 COL9A2Q14055 689 aaPredicted RBP14.48□□□□□ -0.09
SMARCE1-213ENST00000578044 LRP8Q14114 963 aa14.48□□□□□ -0.09
SMARCE1-213ENST00000578044 TCEAL1Q15170 157 aa14.48□□□□□ -0.09
SMARCE1-213ENST00000578044 ANKRD20A8PQ5CZ79 823 aa14.48□□□□□ -0.09
SMARCE1-213ENST00000578044 LRRC38Q5VT99 294 aa14.48□□□□□ -0.09
SMARCE1-213ENST00000578044 NCBP2-AS2Q69YL0 99 aa14.48□□□□□ -0.09
SMARCE1-213ENST00000578044 SPRED1Q7Z699 444 aa14.48□□□□□ -0.09
SMARCE1-213ENST00000578044 TAF8Q7Z7C8 310 aa14.48□□□□□ -0.09
SMARCE1-213ENST00000578044 CCNJLQ8IV13 435 aa14.48□□□□□ -0.09
SMARCE1-213ENST00000578044 FAM46DQ8NEK8 389 aa14.48□□□□□ -0.09
SMARCE1-213ENST00000578044 OR8K1Q8NGG5 319 aa14.48□□□□□ -0.09
SMARCE1-213ENST00000578044 DPYSL5Q9BPU6 564 aa14.48□□□□□ -0.09
SMARCE1-213ENST00000578044 LGR4Q9BXB1 951 aa14.48□□□□□ -0.09
SMARCE1-213ENST00000578044 GULP1Q9UBP9 304 aa14.48□□□□□ -0.09
SMARCE1-213ENST00000578044 RAI2Q9Y5P3 530 aa14.48□□□□□ -0.09
SMARCE1-213ENST00000578044 ZNF462Q96JM2 2506 aa14.48□□□□□ -0.09
SMARCE1-213ENST00000578044 NPIPB15A6NHN6 443 aaPredicted RBP14.47□□□□□ -0.09
SMARCE1-213ENST00000578044 EIF4E1BA6NMX2 242 aaKnown RBP14.47□□□□□ -0.09
SMARCE1-213ENST00000578044 CBFA2T2O43439 604 aa14.47□□□□□ -0.09
SMARCE1-213ENST00000578044 PRKCGP05129 697 aa14.47□□□□□ -0.09
SMARCE1-213ENST00000578044 TMEM253P0C7T8 217 aa14.47□□□□□ -0.09
SMARCE1-213ENST00000578044 CD82P27701 267 aa14.47□□□□□ -0.09
SMARCE1-213ENST00000578044 CASP14P31944 242 aa14.47□□□□□ -0.09
SMARCE1-213ENST00000578044 INHBCP55103 352 aa14.47□□□□□ -0.09
SMARCE1-213ENST00000578044 CCDC173Q0VFZ6 552 aa14.47□□□□□ -0.09
SMARCE1-213ENST00000578044 SLC14A2Q15849 920 aa14.47□□□□□ -0.09
SMARCE1-213ENST00000578044 C3orf38Q5JPI3 329 aa14.47□□□□□ -0.09
SMARCE1-213ENST00000578044 SPECC1LQ69YQ0 1117 aa14.47□□□□□ -0.09
SMARCE1-213ENST00000578044 XKR5Q6UX68 686 aa14.47□□□□□ -0.09
SMARCE1-213ENST00000578044 RD3Q7Z3Z2 195 aa14.47□□□□□ -0.09
SMARCE1-213ENST00000578044 HEATR4Q86WZ0 1026 aa14.47□□□□□ -0.09
SMARCE1-213ENST00000578044 SEMA3CQ99985 751 aa14.47□□□□□ -0.09
SMARCE1-213ENST00000578044 BRD8Q9H0E9 1235 aa14.47□□□□□ -0.09
SMARCE1-213ENST00000578044 TMEM168Q9H0V1 697 aa14.47□□□□□ -0.09
SMARCE1-213ENST00000578044 CDH19Q9H159 772 aa14.47□□□□□ -0.09
SMARCE1-213ENST00000578044 CYP4F12Q9HCS2 524 aa14.47□□□□□ -0.09
SMARCE1-213ENST00000578044 IFNKQ9P0W0 207 aa14.47□□□□□ -0.09
SMARCE1-213ENST00000578044 RABGEF1Q9UJ41 708 aa14.47□□□□□ -0.09
SMARCE1-213ENST00000578044 MFSD11O43934 449 aa14.46□□□□□ -0.09
SMARCE1-213ENST00000578044 RPLP0P05388 317 aaKnown RBP14.46□□□□□ -0.09
SMARCE1-213ENST00000578044 ETV3P41162 512 aa14.46□□□□□ -0.09
SMARCE1-213ENST00000578044 STC1P52823 247 aa14.46□□□□□ -0.09
SMARCE1-213ENST00000578044 CCL7P80098 99 aa14.46□□□□□ -0.09
SMARCE1-213ENST00000578044 VAC14Q08AM6 782 aa14.46□□□□□ -0.09
SMARCE1-213ENST00000578044 TRA2AQ13595 282 aaKnown RBP eCLIP14.46□□□□□ -0.091e-7■□□□□ 8.1
SMARCE1-213ENST00000578044 NFKBIBQ15653 356 aa14.46□□□□□ -0.09
SMARCE1-213ENST00000578044 KCTD16Q68DU8 428 aa14.46□□□□□ -0.09
SMARCE1-213ENST00000578044 Q6ZVL8 140 aa14.46□□□□□ -0.09
SMARCE1-213ENST00000578044 RAB11FIP2Q7L804 512 aa14.46□□□□□ -0.09
SMARCE1-213ENST00000578044 HSD11B1LQ7Z5J1 315 aa14.46□□□□□ -0.09
SMARCE1-213ENST00000578044 NRROSQ86YC3 692 aa14.46□□□□□ -0.09
SMARCE1-213ENST00000578044 SLITRK4Q8IW52 837 aa14.46□□□□□ -0.09
SMARCE1-213ENST00000578044 RHOT2Q8IXI1 618 aa14.46□□□□□ -0.09
SMARCE1-213ENST00000578044 PELI3Q8N2H9 469 aa14.46□□□□□ -0.09
SMARCE1-213ENST00000578044 KCTD6Q8NC69 237 aa14.46□□□□□ -0.09
SMARCE1-213ENST00000578044 ARRDC2Q8TBH0 407 aa14.46□□□□□ -0.09
SMARCE1-213ENST00000578044 PDCD6IPQ8WUM4 868 aaKnown RBP14.46□□□□□ -0.09
SMARCE1-213ENST00000578044 SLC39A7Q92504 469 aa14.46□□□□□ -0.09
SMARCE1-213ENST00000578044 COX14Q96I36 57 aa14.46□□□□□ -0.09
SMARCE1-213ENST00000578044 BTBD6Q96KE9 485 aa14.46□□□□□ -0.09
SMARCE1-213ENST00000578044 TDRD1Q9BXT4 1180 aaKnown RBP14.46□□□□□ -0.09
SMARCE1-213ENST00000578044 RMI1Q9H9A7 625 aa14.46□□□□□ -0.09
SMARCE1-213ENST00000578044 NT5MQ9NPB1 228 aa14.46□□□□□ -0.09
SMARCE1-213ENST00000578044 VPS18Q9P253 973 aa14.46□□□□□ -0.09
SMARCE1-213ENST00000578044 CTTNBP2NLQ9P2B4 639 aa14.46□□□□□ -0.09
SMARCE1-213ENST00000578044 LRIT1Q9P2V4 623 aa14.46□□□□□ -0.09
SMARCE1-213ENST00000578044 INTUQ9ULD6 942 aa14.46□□□□□ -0.09
SMARCE1-213ENST00000578044 TLN1Q9Y490 2541 aaKnown RBP14.46□□□□□ -0.1
SMARCE1-213ENST00000578044 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.45□□□□□ -0.1
SMARCE1-213ENST00000578044 K7ENP7 123 aa14.45□□□□□ -0.1
SMARCE1-213ENST00000578044 HGSO14964 777 aaPredicted RBP14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms