RNA–Protein interactions for RNA: ENST00000577572.5

SS18-206, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 510 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-206ENST00000577572 C5orf42Q9H799 3197 aa15.27■□□□□ 0.03
SS18-206ENST00000577572 MIA3Q5JRA6 1907 aa15.27■□□□□ 0.03
SS18-206ENST00000577572 POC1B-GALNT4F8VUJ3 575 aa15.26■□□□□ 0.03
SS18-206ENST00000577572 AURKAO14965 403 aa15.26■□□□□ 0.03
SS18-206ENST00000577572 DNTTP04053 509 aa15.26■□□□□ 0.03
SS18-206ENST00000577572 ERVK-10P10266 1014 aa15.26■□□□□ 0.03
SS18-206ENST00000577572 GCAP28676 217 aa15.26■□□□□ 0.03
SS18-206ENST00000577572 MAGEA9P43362 315 aa15.26■□□□□ 0.03
SS18-206ENST00000577572 FAM193AP78312 1265 aa15.26■□□□□ 0.03
SS18-206ENST00000577572 TTC31Q49AM3 519 aaPredicted RBP15.26■□□□□ 0.03
SS18-206ENST00000577572 RNF187Q5TA31 235 aaPredicted RBP15.26■□□□□ 0.03
SS18-206ENST00000577572 LRRC66Q68CR7 880 aa15.26■□□□□ 0.03
SS18-206ENST00000577572 NEK5Q6P3R8 708 aa15.26■□□□□ 0.03
SS18-206ENST00000577572 ZNF765Q7L2R6 523 aa15.26■□□□□ 0.03
SS18-206ENST00000577572 GJD3Q8N144 294 aa15.26■□□□□ 0.03
SS18-206ENST00000577572 C2CD4AQ8NCU7 369 aaPredicted RBP15.26■□□□□ 0.03
SS18-206ENST00000577572 OR6P1Q8NGX9 317 aa15.26■□□□□ 0.03
SS18-206ENST00000577572 RPLP0P6Q8NHW5 317 aa15.26■□□□□ 0.03
SS18-206ENST00000577572 DCAKDQ8WVC6 231 aa15.26■□□□□ 0.03
SS18-206ENST00000577572 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.26■□□□□ 0.03
SS18-206ENST00000577572 PBXIP1Q96AQ6 731 aa15.26■□□□□ 0.03
SS18-206ENST00000577572 ARRDC3Q96B67 414 aa15.26■□□□□ 0.03
SS18-206ENST00000577572 TBATAQ96M53 351 aa15.26■□□□□ 0.03
SS18-206ENST00000577572 KDM4CQ9H3R0 1056 aa15.26■□□□□ 0.03
SS18-206ENST00000577572 POLMQ9NP87 494 aaPredicted RBP15.26■□□□□ 0.03
SS18-206ENST00000577572 SMYD2Q9NRG4 433 aa15.26■□□□□ 0.03
SS18-206ENST00000577572 INTS10Q9NVR2 710 aaKnown RBP15.26■□□□□ 0.03
SS18-206ENST00000577572 POLR3BQ9NW08 1133 aaPredicted RBP15.26■□□□□ 0.03
SS18-206ENST00000577572 FAM53CQ9NYF3 392 aa15.26■□□□□ 0.03
SS18-206ENST00000577572 FZD4Q9ULV1 537 aa15.26■□□□□ 0.03
SS18-206ENST00000577572 CA14Q9ULX7 337 aa15.26■□□□□ 0.03
SS18-206ENST00000577572 ACTL7BQ9Y614 415 aa15.26■□□□□ 0.03
SS18-206ENST00000577572 CCDC162PA2VCL2 907 aa15.25■□□□□ 0.03
SS18-206ENST00000577572 KRBA1A5PL33 1030 aa15.25■□□□□ 0.03
SS18-206ENST00000577572 CXorf49A8MYA2 514 aaPredicted RBP15.25■□□□□ 0.03
SS18-206ENST00000577572 CLDN7O95471 211 aa15.25■□□□□ 0.03
SS18-206ENST00000577572 PRKCGP05129 697 aa15.25■□□□□ 0.03
SS18-206ENST00000577572 SNRPAP09012 282 aaKnown RBP15.25■□□□□ 0.03
SS18-206ENST00000577572 LHCGRP22888 699 aa15.25■□□□□ 0.03
SS18-206ENST00000577572 SPRP35270 261 aaPredicted RBP15.25■□□□□ 0.03
SS18-206ENST00000577572 SPAM1P38567 509 aa15.25■□□□□ 0.03
SS18-206ENST00000577572 P2RY2P41231 377 aa15.25■□□□□ 0.03
SS18-206ENST00000577572 WASP42768 502 aa15.25■□□□□ 0.03
SS18-206ENST00000577572 RPS9P46781 194 aaKnown RBP15.25■□□□□ 0.03
SS18-206ENST00000577572 LEPRP48357 1165 aaKnown RBP15.25■□□□□ 0.03
SS18-206ENST00000577572 PSMD8P48556 350 aa15.25■□□□□ 0.03
SS18-206ENST00000577572 SPINT3P49223 89 aa15.25■□□□□ 0.03
SS18-206ENST00000577572 TTPAP49638 278 aa15.25■□□□□ 0.03
SS18-206ENST00000577572 PTSQ03393 145 aa15.25■□□□□ 0.03
SS18-206ENST00000577572 CACNG1Q06432 222 aa15.25■□□□□ 0.03
SS18-206ENST00000577572 RALGDSQ12967 914 aa15.25■□□□□ 0.03
SS18-206ENST00000577572 CRY1Q16526 586 aa15.25■□□□□ 0.03
SS18-206ENST00000577572 PACS1Q6VY07 963 aa15.25■□□□□ 0.03
SS18-206ENST00000577572 TMPRSS6Q8IU80 811 aa15.25■□□□□ 0.03
SS18-206ENST00000577572 CILP2Q8IUL8 1156 aa15.25■□□□□ 0.03
SS18-206ENST00000577572 OR13C4Q8NGS5 318 aa15.25■□□□□ 0.03
SS18-206ENST00000577572 EPS8L3Q8TE67 593 aaKnown RBP15.25■□□□□ 0.03
SS18-206ENST00000577572 CLDN23Q96B33 292 aa15.25■□□□□ 0.03
SS18-206ENST00000577572 EID2BQ96D98 161 aa15.25■□□□□ 0.03
SS18-206ENST00000577572 ATP6V1G3Q96LB4 118 aa15.25■□□□□ 0.03
SS18-206ENST00000577572 MCMBPQ9BTE3 642 aa15.25■□□□□ 0.03
SS18-206ENST00000577572 LMAN1LQ9HAT1 526 aa15.25■□□□□ 0.03
SS18-206ENST00000577572 CATSPERZQ9NTU4 200 aa15.25■□□□□ 0.03
SS18-206ENST00000577572 FBXO5Q9UKT4 447 aa15.25■□□□□ 0.03
SS18-206ENST00000577572 NDRG2Q9UN36 371 aaKnown RBP15.25■□□□□ 0.03
SS18-206ENST00000577572 KCTD3Q9Y597 815 aa15.25■□□□□ 0.03
SS18-206ENST00000577572 FADS3Q9Y5Q0 445 aa15.25■□□□□ 0.03
SS18-206ENST00000577572 MYO10Q9HD67 2058 aa15.24■□□□□ 0.03
SS18-206ENST00000577572 CKAP5Q14008 2032 aa15.24■□□□□ 0.03
SS18-206ENST00000577572 TLDC2A0PJX2 215 aa15.24■□□□□ 0.03
SS18-206ENST00000577572 AGAP14A8MT82 685 aa15.24■□□□□ 0.03
SS18-206ENST00000577572 CD3EAPO15446 510 aaKnown RBP15.24■□□□□ 0.03
SS18-206ENST00000577572 SYF2O95926 243 aaKnown RBP15.24■□□□□ 0.03
SS18-206ENST00000577572 GOT2P00505 430 aaKnown RBP15.24■□□□□ 0.03
SS18-206ENST00000577572 PYGLP06737 847 aa15.24■□□□□ 0.03
SS18-206ENST00000577572 BPIP17213 487 aa15.24■□□□□ 0.03
SS18-206ENST00000577572 ITGALP20701 1170 aa15.24■□□□□ 0.03
SS18-206ENST00000577572 TARSP26639 723 aaKnown RBP15.24■□□□□ 0.03
SS18-206ENST00000577572 DRD3P35462 400 aa15.24■□□□□ 0.03
SS18-206ENST00000577572 ARSDP51689 593 aa15.24■□□□□ 0.03
SS18-206ENST00000577572 ADARP55265 1226 aaKnown RBP15.24■□□□□ 0.03
SS18-206ENST00000577572 XIAPP98170 497 aa15.24■□□□□ 0.03
SS18-206ENST00000577572 AGERQ15109 404 aa15.24■□□□□ 0.03
SS18-206ENST00000577572 TYSND1Q2T9J0 566 aa15.24■□□□□ 0.03
SS18-206ENST00000577572 FASTKD1Q53R41 847 aaKnown RBP15.24■□□□□ 0.03
SS18-206ENST00000577572 PIP5KL1Q5T9C9 394 aa15.24■□□□□ 0.03
SS18-206ENST00000577572 ZNF470Q6ECI4 717 aa15.24■□□□□ 0.03
SS18-206ENST00000577572 KIAA1211LQ6NV74 962 aa15.24■□□□□ 0.03
SS18-206ENST00000577572 LIPIQ6XZB0 460 aa15.24■□□□□ 0.03
SS18-206ENST00000577572 MAMSTRQ6ZN01 415 aa15.24■□□□□ 0.03
SS18-206ENST00000577572 TIFABQ6ZNK6 161 aa15.24■□□□□ 0.03
SS18-206ENST00000577572 SNX20Q7Z614 316 aa15.24■□□□□ 0.03
SS18-206ENST00000577572 CCDC91Q7Z6B0 441 aa15.24■□□□□ 0.03
SS18-206ENST00000577572 SIPA1Q96FS4 1042 aa15.24■□□□□ 0.03
SS18-206ENST00000577572 RHOJQ9H4E5 214 aa15.24■□□□□ 0.03
SS18-206ENST00000577572 IARS2Q9NSE4 1012 aaKnown RBP15.24■□□□□ 0.03
SS18-206ENST00000577572 GGT7Q9UJ14 662 aa15.24■□□□□ 0.03
SS18-206ENST00000577572 NCKAP1Q9Y2A7 1128 aa15.24■□□□□ 0.03
SS18-206ENST00000577572 SLC30A1Q9Y6M5 507 aa15.24■□□□□ 0.03
SS18-206ENST00000577572 ANKRD36A6QL64 1941 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms