RNA–Protein interactions for RNA: ENST00000574848.5

LITAF-216, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-216ENST00000574848 SEPT3Q9UH03 358 aa10.64□□□□□ -0.71
LITAF-216ENST00000574848 ASIC3Q9UHC3 531 aa10.64□□□□□ -0.71
LITAF-216ENST00000574848 ATP8A1Q9Y2Q0 1164 aa10.64□□□□□ -0.71
LITAF-216ENST00000574848 CHD6Q8TD26 2715 aa10.64□□□□□ -0.71
LITAF-216ENST00000574848 LY6G6EA0A0G2JKS1 128 aa10.63□□□□□ -0.71
LITAF-216ENST00000574848 NEMP2A6NFY4 417 aa10.63□□□□□ -0.71
LITAF-216ENST00000574848 ZNF487B1APH4 448 aa10.63□□□□□ -0.71
LITAF-216ENST00000574848 TAF4O00268 1085 aa10.63□□□□□ -0.71
LITAF-216ENST00000574848 LZTS3O60299 673 aaPredicted RBP10.63□□□□□ -0.71
LITAF-216ENST00000574848 MAFKO60675 156 aa10.63□□□□□ -0.71
LITAF-216ENST00000574848 MMP20O60882 483 aa10.63□□□□□ -0.71
LITAF-216ENST00000574848 SOCS5O75159 536 aa10.63□□□□□ -0.71
LITAF-216ENST00000574848 ALPPL2P10696 532 aa10.63□□□□□ -0.71
LITAF-216ENST00000574848 CKMT1AP12532 417 aa10.63□□□□□ -0.71
LITAF-216ENST00000574848 C6P13671 934 aa10.63□□□□□ -0.71
LITAF-216ENST00000574848 ITIH2P19823 946 aa10.63□□□□□ -0.71
LITAF-216ENST00000574848 IL4RP24394 825 aa10.63□□□□□ -0.71
LITAF-216ENST00000574848 HNF1BP35680 557 aa10.63□□□□□ -0.71
LITAF-216ENST00000574848 CDKN2BP42772 138 aa10.63□□□□□ -0.71
LITAF-216ENST00000574848 RENBPP51606 427 aa10.63□□□□□ -0.71
LITAF-216ENST00000574848 EIF3BP55884 814 aaKnown RBP10.63□□□□□ -0.71
LITAF-216ENST00000574848 RALGDSQ12967 914 aa10.63□□□□□ -0.71
LITAF-216ENST00000574848 EIF2B5Q13144 721 aaKnown RBP10.63□□□□□ -0.71
LITAF-216ENST00000574848 PTK2BQ14289 1009 aa10.63□□□□□ -0.71
LITAF-216ENST00000574848 KRT81Q14533 505 aa10.63□□□□□ -0.71
LITAF-216ENST00000574848 LBRQ14739 615 aaKnown RBP10.63□□□□□ -0.71
LITAF-216ENST00000574848 IRF4Q15306 451 aa10.63□□□□□ -0.71
LITAF-216ENST00000574848 RALGPS1Q5JS13 557 aa10.63□□□□□ -0.71
LITAF-216ENST00000574848 KAZNQ674X7 775 aa10.63□□□□□ -0.71
LITAF-216ENST00000574848 ERAP2Q6P179 960 aa10.63□□□□□ -0.71
LITAF-216ENST00000574848 TTC27Q6P3X3 843 aa10.63□□□□□ -0.71
LITAF-216ENST00000574848 MFSD7Q6UXD7 560 aa10.63□□□□□ -0.71
LITAF-216ENST00000574848 MACC1Q6ZN28 852 aa10.63□□□□□ -0.71
LITAF-216ENST00000574848 BBS12Q6ZW61 710 aa10.63□□□□□ -0.71
LITAF-216ENST00000574848 CAMK1DQ8IU85 385 aa10.63□□□□□ -0.71
LITAF-216ENST00000574848 LRRC49Q8IUZ0 686 aa10.63□□□□□ -0.71
LITAF-216ENST00000574848 TP53INP2Q8IXH6 220 aa10.63□□□□□ -0.71
LITAF-216ENST00000574848 C1orf54Q8WWF1 131 aa10.63□□□□□ -0.71
LITAF-216ENST00000574848 HSPH1Q92598 858 aa10.63□□□□□ -0.71
LITAF-216ENST00000574848 SNF8Q96H20 258 aa10.63□□□□□ -0.71
LITAF-216ENST00000574848 MGME1Q9BQP7 344 aa10.63□□□□□ -0.71
LITAF-216ENST00000574848 DUSP23Q9BVJ7 150 aa10.63□□□□□ -0.71
LITAF-216ENST00000574848 HEMGNQ9BXL5 484 aa10.63□□□□□ -0.71
LITAF-216ENST00000574848 FOXP3Q9BZS1 431 aa10.63□□□□□ -0.71
LITAF-216ENST00000574848 TRIM31Q9BZY9 425 aa10.63□□□□□ -0.71
LITAF-216ENST00000574848 CCDC86Q9H6F5 360 aaKnown RBP10.63□□□□□ -0.71
LITAF-216ENST00000574848 DNAJC28Q9NX36 388 aa10.63□□□□□ -0.71
LITAF-216ENST00000574848 KLF15Q9UIH9 416 aa10.63□□□□□ -0.71
LITAF-216ENST00000574848 DRG1Q9Y295 367 aaKnown RBP10.63□□□□□ -0.71
LITAF-216ENST00000574848 U3KQA8 63 aa10.63□□□□□ -0.71
LITAF-216ENST00000574848 ANKRD11Q6UB99 2663 aaPredicted RBP10.62□□□□□ -0.71
LITAF-216ENST00000574848 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.62□□□□□ -0.71
LITAF-216ENST00000574848 A0A1W2PQ67 120 aa10.62□□□□□ -0.71
LITAF-216ENST00000574848 TCRBV7S2A1N4TA0A589 114 aa10.62□□□□□ -0.71
LITAF-216ENST00000574848 K7ESM1 405 aa10.62□□□□□ -0.71
LITAF-216ENST00000574848 TPP1O14773 563 aa10.62□□□□□ -0.71
LITAF-216ENST00000574848 AQP9O43315 295 aa10.62□□□□□ -0.71
LITAF-216ENST00000574848 HTRA2O43464 458 aaPredicted RBP10.62□□□□□ -0.71
LITAF-216ENST00000574848 LIASO43766 372 aa10.62□□□□□ -0.71
LITAF-216ENST00000574848 ZNF189O75820 626 aaPredicted RBP10.62□□□□□ -0.71
LITAF-216ENST00000574848 GP1BAP07359 652 aa10.62□□□□□ -0.71
LITAF-216ENST00000574848 ZFXP17010 805 aaPredicted RBP10.62□□□□□ -0.71
LITAF-216ENST00000574848 XPAP23025 273 aaPredicted RBP10.62□□□□□ -0.71
LITAF-216ENST00000574848 AMPD1P23109 780 aa10.62□□□□□ -0.71
LITAF-216ENST00000574848 KDELR1P24390 212 aa10.62□□□□□ -0.71
LITAF-216ENST00000574848 ECHS1P30084 290 aa10.62□□□□□ -0.71
LITAF-216ENST00000574848 CDH6P55285 790 aa10.62□□□□□ -0.71
LITAF-216ENST00000574848 BCL2L1Q07817 233 aa10.62□□□□□ -0.71
LITAF-216ENST00000574848 SLC10A7Q0GE19 358 aa10.62□□□□□ -0.71
LITAF-216ENST00000574848 TAZQ16635 292 aa10.62□□□□□ -0.71
LITAF-216ENST00000574848 WSCD2Q2TBF2 565 aa10.62□□□□□ -0.71
LITAF-216ENST00000574848 HES3Q5TGS1 186 aa10.62□□□□□ -0.71
LITAF-216ENST00000574848 ZCCHC8Q6NZY4 707 aaKnown RBP10.62□□□□□ -0.71
LITAF-216ENST00000574848 KDM7AQ6ZMT4 941 aa10.62□□□□□ -0.71
LITAF-216ENST00000574848 DPPA4Q7L190 304 aa10.62□□□□□ -0.71
LITAF-216ENST00000574848 TMC3Q7Z5M5 1100 aa10.62□□□□□ -0.71
LITAF-216ENST00000574848 RFX6Q8HWS3 928 aa10.62□□□□□ -0.71
LITAF-216ENST00000574848 ATPAF2Q8N5M1 289 aa10.62□□□□□ -0.71
LITAF-216ENST00000574848 PDCD7Q8N8D1 485 aaKnown RBP10.62□□□□□ -0.71
LITAF-216ENST00000574848 DCBLD1Q8N8Z6 715 aa10.62□□□□□ -0.71
LITAF-216ENST00000574848 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.62□□□□□ -0.71
LITAF-216ENST00000574848 BTN2A2Q8WVV5 523 aa10.62□□□□□ -0.71
LITAF-216ENST00000574848 UBLCP1Q8WVY7 318 aaPredicted RBP10.62□□□□□ -0.71
LITAF-216ENST00000574848 FATE1Q969F0 183 aa10.62□□□□□ -0.71
LITAF-216ENST00000574848 FAF2Q96CS3 445 aa10.62□□□□□ -0.71
LITAF-216ENST00000574848 NSMCE3Q96MG7 304 aa10.62□□□□□ -0.71
LITAF-216ENST00000574848 NUDCD1Q96RS6 583 aa10.62□□□□□ -0.71
LITAF-216ENST00000574848 ZNF670Q9BS34 389 aa10.62□□□□□ -0.71
LITAF-216ENST00000574848 WRAP53Q9BUR4 548 aaKnown RBP10.62□□□□□ -0.71
LITAF-216ENST00000574848 CAAP1Q9H8G2 361 aa10.62□□□□□ -0.71
LITAF-216ENST00000574848 MBNL1Q9NR56 388 aaKnown RBP10.62□□□□□ -0.71
LITAF-216ENST00000574848 NCKIPSDQ9NZQ3 722 aa10.62□□□□□ -0.71
LITAF-216ENST00000574848 PNMA8BQ9ULN7 279 aaPredicted RBP10.62□□□□□ -0.71
LITAF-216ENST00000574848 ZNF148Q9UQR1 794 aa10.62□□□□□ -0.71
LITAF-216ENST00000574848 SNX24Q9Y343 169 aa10.62□□□□□ -0.71
LITAF-216ENST00000574848 TDRD6O60522 2096 aaKnown RBP10.61□□□□□ -0.71
LITAF-216ENST00000574848 MYLKQ15746 1914 aa10.61□□□□□ -0.71
LITAF-216ENST00000574848 FAM149AA5PLN7 773 aa10.61□□□□□ -0.71
LITAF-216ENST00000574848 APOC4-APOC2K7ER74 178 aa10.61□□□□□ -0.71
LITAF-216ENST00000574848 SMAPO00193 183 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms