RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 ARHGAP9Q9BRR9 750 aa13.37□□□□□ -0.27
CCDC40-205ENST00000571028 TMEM121Q9BTD3 319 aa13.37□□□□□ -0.27
CCDC40-205ENST00000571028 AP1M1Q9BXS5 423 aa13.37□□□□□ -0.27
CCDC40-205ENST00000571028 SUV39H2Q9H5I1 410 aa13.37□□□□□ -0.27
CCDC40-205ENST00000571028 KCND1Q9NSA2 647 aa13.37□□□□□ -0.27
CCDC40-205ENST00000571028 UBP1Q9NZI7 540 aa13.37□□□□□ -0.27
CCDC40-205ENST00000571028 DMTF1Q9Y222 760 aa13.37□□□□□ -0.27
CCDC40-205ENST00000571028 PLXNA2O75051 1894 aa13.37□□□□□ -0.27
CCDC40-205ENST00000571028 NEMP1O14524 444 aa13.36□□□□□ -0.27
CCDC40-205ENST00000571028 MTSS1O43312 755 aa13.36□□□□□ -0.27
CCDC40-205ENST00000571028 LATO43561 262 aa13.36□□□□□ -0.27
CCDC40-205ENST00000571028 LIASO43766 372 aa13.36□□□□□ -0.27
CCDC40-205ENST00000571028 STK10O94804 968 aaKnown RBP13.36□□□□□ -0.27
CCDC40-205ENST00000571028 CKMT1AP12532 417 aa13.36□□□□□ -0.27
CCDC40-205ENST00000571028 ITIH2P19823 946 aa13.36□□□□□ -0.27
CCDC40-205ENST00000571028 NFKB1P19838 968 aa13.36□□□□□ -0.27
CCDC40-205ENST00000571028 CR2P20023 1033 aa13.36□□□□□ -0.27
CCDC40-205ENST00000571028 ITGB7P26010 798 aa13.36□□□□□ -0.27
CCDC40-205ENST00000571028 CSNK1DP48730 415 aa13.36□□□□□ -0.27
CCDC40-205ENST00000571028 DUSP3P51452 185 aaPredicted RBP13.36□□□□□ -0.27
CCDC40-205ENST00000571028 NEK3P51956 506 aa13.36□□□□□ -0.27
CCDC40-205ENST00000571028 PCSK7Q16549 785 aa13.36□□□□□ -0.27
CCDC40-205ENST00000571028 KCTD19Q17RG1 926 aaPredicted RBP13.36□□□□□ -0.27
CCDC40-205ENST00000571028 SETMARQ53H47 684 aaPredicted RBP13.36□□□□□ -0.27
CCDC40-205ENST00000571028 CDCP2Q5VXM1 449 aa13.36□□□□□ -0.27
CCDC40-205ENST00000571028 ATG14Q6ZNE5 492 aa13.36□□□□□ -0.27
CCDC40-205ENST00000571028 ZNF567Q8N184 647 aa13.36□□□□□ -0.27
CCDC40-205ENST00000571028 FAM71DQ8N9W8 422 aa13.36□□□□□ -0.27
CCDC40-205ENST00000571028 CCDC110Q8TBZ0 833 aa13.36□□□□□ -0.27
CCDC40-205ENST00000571028 MAPK15Q8TD08 544 aa13.36□□□□□ -0.27
CCDC40-205ENST00000571028 MAIP1Q8WWC4 291 aa13.36□□□□□ -0.27
CCDC40-205ENST00000571028 ZNF592Q92610 1267 aa13.36□□□□□ -0.27
CCDC40-205ENST00000571028 FATE1Q969F0 183 aa13.36□□□□□ -0.27
CCDC40-205ENST00000571028 KLHDC7BQ96G42 594 aa13.36□□□□□ -0.27
CCDC40-205ENST00000571028 TUBGCP5Q96RT8 1024 aa13.36□□□□□ -0.27
CCDC40-205ENST00000571028 RBM15Q96T37 977 aaKnown RBP eCLIP13.36□□□□□ -0.27
CCDC40-205ENST00000571028 OSBPL1AQ9BXW6 950 aa13.36□□□□□ -0.27
CCDC40-205ENST00000571028 CPEB1Q9BZB8 566 aaKnown RBP13.36□□□□□ -0.27
CCDC40-205ENST00000571028 GLOD4Q9HC38 313 aa13.36□□□□□ -0.27
CCDC40-205ENST00000571028 ASCL3Q9NQ33 180 aa13.36□□□□□ -0.27
CCDC40-205ENST00000571028 RSPH14Q9UHP6 348 aa13.36□□□□□ -0.27
CCDC40-205ENST00000571028 SATB2Q9UPW6 733 aa13.36□□□□□ -0.27
CCDC40-205ENST00000571028 ZNF148Q9UQR1 794 aa13.36□□□□□ -0.27
CCDC40-205ENST00000571028 ITM2BQ9Y287 266 aa13.36□□□□□ -0.27
CCDC40-205ENST00000571028 ATP8A1Q9Y2Q0 1164 aa13.36□□□□□ -0.27
CCDC40-205ENST00000571028 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.35□□□□□ -0.27
CCDC40-205ENST00000571028 A8MX80 341 aa13.35□□□□□ -0.27
CCDC40-205ENST00000571028 PCDH8O95206 1070 aa13.35□□□□□ -0.27
CCDC40-205ENST00000571028 IFNB1P01574 187 aa13.35□□□□□ -0.27
CCDC40-205ENST00000571028 GP1BAP07359 652 aa13.35□□□□□ -0.27
CCDC40-205ENST00000571028 ADRB3P13945 408 aa13.35□□□□□ -0.27
CCDC40-205ENST00000571028 TCP1P17987 556 aaKnown RBP13.35□□□□□ -0.27
CCDC40-205ENST00000571028 DGKAP23743 735 aa13.35□□□□□ -0.27
CCDC40-205ENST00000571028 ABL2P42684 1182 aa13.35□□□□□ -0.27
CCDC40-205ENST00000571028 CCDC15Q0P6D6 951 aa13.35□□□□□ -0.27
CCDC40-205ENST00000571028 TRAF2Q12933 501 aa13.35□□□□□ -0.27
CCDC40-205ENST00000571028 GRM3Q14832 879 aa13.35□□□□□ -0.27
CCDC40-205ENST00000571028 SIX1Q15475 284 aaPredicted RBP13.35□□□□□ -0.27
CCDC40-205ENST00000571028 COLEC12Q5KU26 742 aa13.35□□□□□ -0.27
CCDC40-205ENST00000571028 PIP5KL1Q5T9C9 394 aa13.35□□□□□ -0.27
CCDC40-205ENST00000571028 AGBL4Q5VU57 503 aa13.35□□□□□ -0.27
CCDC40-205ENST00000571028 FOXR1Q6PIV2 292 aa13.35□□□□□ -0.27
CCDC40-205ENST00000571028 ZNF574Q6ZN55 896 aaPredicted RBP13.35□□□□□ -0.27
CCDC40-205ENST00000571028 PRUNE1Q86TP1 453 aa13.35□□□□□ -0.27
CCDC40-205ENST00000571028 SLC25A45Q8N413 288 aa13.35□□□□□ -0.27
CCDC40-205ENST00000571028 SPATA22Q8NHS9 363 aa13.35□□□□□ -0.27
CCDC40-205ENST00000571028 SLC35B2Q8TB61 432 aa13.35□□□□□ -0.27
CCDC40-205ENST00000571028 ARRDC2Q8TBH0 407 aa13.35□□□□□ -0.27
CCDC40-205ENST00000571028 KLK6Q92876 244 aa13.35□□□□□ -0.27
CCDC40-205ENST00000571028 TEKT5Q96M29 485 aa13.35□□□□□ -0.27
CCDC40-205ENST00000571028 ZNF641Q96N77 438 aaPredicted RBP13.35□□□□□ -0.27
CCDC40-205ENST00000571028 KDM4CQ9H3R0 1056 aa13.35□□□□□ -0.27
CCDC40-205ENST00000571028 CHKBQ9Y259 395 aa13.35□□□□□ -0.27
CCDC40-205ENST00000571028 SAR1BQ9Y6B6 198 aa13.35□□□□□ -0.27
CCDC40-205ENST00000571028 NEMP2A6NFY4 417 aa13.34□□□□□ -0.27
CCDC40-205ENST00000571028 PRAMEF26H0Y7S4 382 aa13.34□□□□□ -0.27
CCDC40-205ENST00000571028 PGRMC1O00264 195 aaKnown RBP13.34□□□□□ -0.27
CCDC40-205ENST00000571028 FANCGO15287 622 aa13.34□□□□□ -0.27
CCDC40-205ENST00000571028 PMPCBO75439 489 aa13.34□□□□□ -0.27
CCDC40-205ENST00000571028 MT-CYBP00156 380 aaPredicted RBP13.34□□□□□ -0.27
CCDC40-205ENST00000571028 CPP00450 1065 aa13.34□□□□□ -0.27
CCDC40-205ENST00000571028 TIMP2P16035 220 aa13.34□□□□□ -0.27
CCDC40-205ENST00000571028 CTPS1P17812 591 aa13.34□□□□□ -0.27
CCDC40-205ENST00000571028 CD68P34810 354 aaPredicted RBP13.34□□□□□ -0.27
CCDC40-205ENST00000571028 KCNJ1P48048 391 aa13.34□□□□□ -0.27
CCDC40-205ENST00000571028 EPHB1P54762 984 aa13.34□□□□□ -0.27
CCDC40-205ENST00000571028 GDF10P55107 478 aa13.34□□□□□ -0.27
CCDC40-205ENST00000571028 ETF1P62495 437 aaKnown RBP13.34□□□□□ -0.27
CCDC40-205ENST00000571028 SKOR1P84550 965 aa13.34□□□□□ -0.27
CCDC40-205ENST00000571028 IHHQ14623 411 aa13.34□□□□□ -0.27
CCDC40-205ENST00000571028 ANKRD20A2Q5SQ80 823 aa13.34□□□□□ -0.27
CCDC40-205ENST00000571028 ARMC12Q5T9G4 340 aa13.34□□□□□ -0.27
CCDC40-205ENST00000571028 ANKRD20A1Q5TYW2 823 aa13.34□□□□□ -0.27
CCDC40-205ENST00000571028 ANKRD20A3Q5VUR7 823 aa13.34□□□□□ -0.27
CCDC40-205ENST00000571028 PAPD7Q5XG87 772 aaKnown RBP13.34□□□□□ -0.27
CCDC40-205ENST00000571028 GSTA5Q7RTV2 222 aa13.34□□□□□ -0.27
CCDC40-205ENST00000571028 ZSWIM9Q86XI8 627 aa13.34□□□□□ -0.27
CCDC40-205ENST00000571028 RASGEF1CQ8N431 466 aa13.34□□□□□ -0.27
CCDC40-205ENST00000571028 ARL14Q8N4G2 192 aa13.34□□□□□ -0.27
CCDC40-205ENST00000571028 LPCAT1Q8NF37 534 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms