RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 TPGS1Q6ZTW0 290 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 TRMT10CQ7L0Y3 403 aaKnown RBP3.58□□□□□ -1.84
SMG6-208ENST00000570874 PLEKHH3Q7Z736 793 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 TPRA1Q86W33 373 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 DDIASQ8IXT1 998 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 ZNF679Q8IYX0 411 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 RASGEF1CQ8N431 466 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 POU5F2Q8N7G0 328 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 BANPQ8N9N5 519 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 SETD9Q8NE22 299 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 SLC24A4Q8NFF2 622 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 NEK11Q8NG66 645 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 OR8K1Q8NGG5 319 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 LMO3Q8TAP4 145 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 BAHD1Q8TBE0 780 aaPredicted RBP3.58□□□□□ -1.84
SMG6-208ENST00000570874 PDCD6IPQ8WUM4 868 aaKnown RBP3.58□□□□□ -1.84
SMG6-208ENST00000570874 DNAJA4Q8WW22 397 aaPredicted RBP3.58□□□□□ -1.84
SMG6-208ENST00000570874 LZICQ8WZA0 190 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 GLG1Q92896 1179 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 PPP2R3CQ969Q6 453 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 IQCDQ96DY2 449 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 HMCESQ96FZ2 354 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 CHMP6Q96FZ7 201 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 ABHD17AQ96GS6 310 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 BTBD6Q96KE9 485 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 GAL3ST4Q96RP7 486 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 AGAP2Q99490 1192 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 PARK7Q99497 189 aaKnown RBP3.58□□□□□ -1.84
SMG6-208ENST00000570874 ZBTB18Q99592 522 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 MIPEPQ99797 713 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 ZFYVE21Q9BQ24 234 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 AIFM2Q9BRQ8 373 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 NUP58Q9BVL2 599 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 HEMGNQ9BXL5 484 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 UBXN6Q9BZV1 441 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 GPR88Q9GZN0 384 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 LACRTQ9GZZ8 138 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 TMEM117Q9H0C3 514 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 CXCL16Q9H2A7 254 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 ST6GALNAC4Q9H4F1 302 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 IGFLR1Q9H665 355 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 EXO5Q9H790 373 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 COQ10BQ9H8M1 238 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 NHEJ1Q9H9Q4 299 aaPredicted RBP3.58□□□□□ -1.84
SMG6-208ENST00000570874 SUGCTQ9HAC7 445 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 NOD2Q9HC29 1040 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 TMEM8AQ9HCN3 771 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 LATS2Q9NRM7 1088 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.58□□□□□ -1.84
SMG6-208ENST00000570874 TAS2R10Q9NYW0 307 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP3.58□□□□□ -1.84
SMG6-208ENST00000570874 GCNT4Q9P109 453 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 LARSQ9P2J5 1176 aaKnown RBP3.58□□□□□ -1.84
SMG6-208ENST00000570874 THEGQ9P2T0 379 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 GPN3Q9UHW5 284 aaPredicted RBP3.58□□□□□ -1.84
SMG6-208ENST00000570874 TUBD1Q9UJT1 453 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 PAIP2BQ9ULR5 123 aaKnown RBP3.58□□□□□ -1.84
SMG6-208ENST00000570874 GABRQQ9UN88 632 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 ERVK-19Q9WJR5 959 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 BTBD3Q9Y2F9 522 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 TBC1D30Q9Y2I9 924 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 R3HDM2Q9Y2K5 976 aaKnown RBP3.58□□□□□ -1.84
SMG6-208ENST00000570874 RWDD3Q9Y3V2 267 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 TRAF6Q9Y4K3 522 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 PCDHB4Q9Y5E5 795 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 DUSP10Q9Y6W6 482 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 PTPRJQ12913 1337 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 DOCK4Q8N1I0 1966 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 A0A087X0T9 212 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 A0A088AWK7 358 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.57□□□□□ -1.84
SMG6-208ENST00000570874 IGKV6-21A0A0C4DH24 114 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 MACROD2A1Z1Q3 448 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 SH3D21A4FU49 640 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 MYADML2A6NDP7 307 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 ASB14A6NK59 587 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 ISM1B1AKI9 464 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 PRR23D1E9PI22 279 aaPredicted RBP3.57□□□□□ -1.84
SMG6-208ENST00000570874 TGFBR3LH3BV60 316 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 MEFVO15553 781 aaPredicted RBP3.57□□□□□ -1.84
SMG6-208ENST00000570874 TGM5O43548 720 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 IDH3BO43837 385 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 VEGFDO43915 354 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 GUCY1B2O75343 617 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 RHBDL1O75783 438 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 CBR3O75828 277 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 HTR3BO95264 441 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 MOCS3O95396 460 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 C22orf31O95567 290 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 F9P00740 461 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 GH1P01241 217 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 VTNP04004 478 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 FYNP06241 537 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 FHP07954 510 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 MMP3P08254 477 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 IQCF3P0C7M6 154 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 FAM228BP0C875 321 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 PRR23D2P0DMB1 279 aaPredicted RBP3.57□□□□□ -1.84
SMG6-208ENST00000570874 VSIG8P0DPA2 414 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 INSRRP14616 1297 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms