RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.59□□□□□ -1.35
CTDNEP1-204ENST00000570484 OR14C36Q8NHC7 312 aa6.59□□□□□ -1.35
CTDNEP1-204ENST00000570484 GSDMBQ8TAX9 411 aa6.59□□□□□ -1.35
CTDNEP1-204ENST00000570484 BRSK1Q8TDC3 778 aa6.59□□□□□ -1.35
CTDNEP1-204ENST00000570484 AENQ8WTP8 325 aaKnown RBP6.59□□□□□ -1.35
CTDNEP1-204ENST00000570484 PIH1D2Q8WWB5 315 aa6.59□□□□□ -1.35
CTDNEP1-204ENST00000570484 CAVIN3Q969G5 261 aa6.59□□□□□ -1.35
CTDNEP1-204ENST00000570484 SCRN2Q96FV2 425 aa6.59□□□□□ -1.35
CTDNEP1-204ENST00000570484 MRGPRX1Q96LB2 322 aa6.59□□□□□ -1.35
CTDNEP1-204ENST00000570484 C9orf72Q96LT7 481 aa6.59□□□□□ -1.35
CTDNEP1-204ENST00000570484 PWWP2AQ96N64 755 aa6.59□□□□□ -1.35
CTDNEP1-204ENST00000570484 MCCC1Q96RQ3 725 aaPredicted RBP6.59□□□□□ -1.35
CTDNEP1-204ENST00000570484 LYSMD1Q96S90 227 aa6.59□□□□□ -1.35
CTDNEP1-204ENST00000570484 FAM129BQ96TA1 746 aa6.59□□□□□ -1.35
CTDNEP1-204ENST00000570484 EBNA1BP2Q99848 306 aaKnown RBP6.59□□□□□ -1.35
CTDNEP1-204ENST00000570484 FAM167BQ9BTA0 163 aa6.59□□□□□ -1.35
CTDNEP1-204ENST00000570484 C1QTNF7Q9BXJ2 289 aa6.59□□□□□ -1.35
CTDNEP1-204ENST00000570484 BTBD1Q9H0C5 482 aa6.59□□□□□ -1.35
CTDNEP1-204ENST00000570484 SLC6A17Q9H1V8 727 aa6.59□□□□□ -1.35
CTDNEP1-204ENST00000570484 ACBD3Q9H3P7 528 aa6.59□□□□□ -1.35
CTDNEP1-204ENST00000570484 CDC42EP4Q9H3Q1 356 aaKnown RBP6.59□□□□□ -1.35
CTDNEP1-204ENST00000570484 MRM3Q9HC36 420 aaKnown RBP6.59□□□□□ -1.35
CTDNEP1-204ENST00000570484 MAGEE1Q9HCI5 957 aa6.59□□□□□ -1.35
CTDNEP1-204ENST00000570484 TXNDC16Q9P2K2 825 aa6.59□□□□□ -1.35
CTDNEP1-204ENST00000570484 SARDHQ9UL12 918 aa6.59□□□□□ -1.35
CTDNEP1-204ENST00000570484 SOX13Q9UN79 622 aa6.59□□□□□ -1.35
CTDNEP1-204ENST00000570484 ITM2BQ9Y287 266 aa6.59□□□□□ -1.35
CTDNEP1-204ENST00000570484 ARL5AQ9Y689 179 aa6.59□□□□□ -1.35
CTDNEP1-204ENST00000570484 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.59□□□□□ -1.35
CTDNEP1-204ENST00000570484 IKBKGQ9Y6K9 419 aa6.59□□□□□ -1.35
CTDNEP1-204ENST00000570484 DOCK6Q96HP0 2047 aa6.59□□□□□ -1.36
CTDNEP1-204ENST00000570484 EYSQ5T1H1 3165 aa6.59□□□□□ -1.36
CTDNEP1-204ENST00000570484 REV3LO60673 3130 aa6.59□□□□□ -1.36
CTDNEP1-204ENST00000570484 A0A087WUV0 522 aaPredicted RBP6.58□□□□□ -1.36
CTDNEP1-204ENST00000570484 FAM47DPA6NHR8 397 aa6.58□□□□□ -1.36
CTDNEP1-204ENST00000570484 A8MX80 341 aa6.58□□□□□ -1.36
CTDNEP1-204ENST00000570484 H0Y858 1186 aa6.58□□□□□ -1.36
CTDNEP1-204ENST00000570484 PSMD11O00231 422 aa6.58□□□□□ -1.36
CTDNEP1-204ENST00000570484 PLK4O00444 970 aa6.58□□□□□ -1.36
CTDNEP1-204ENST00000570484 PFDN6O15212 129 aa6.58□□□□□ -1.36
CTDNEP1-204ENST00000570484 TP73O15350 636 aa6.58□□□□□ -1.36
CTDNEP1-204ENST00000570484 TSPAN6O43657 245 aa6.58□□□□□ -1.36
CTDNEP1-204ENST00000570484 PLRG1O43660 514 aaKnown RBP6.58□□□□□ -1.36
CTDNEP1-204ENST00000570484 AP1G1O43747 822 aa6.58□□□□□ -1.36
CTDNEP1-204ENST00000570484 NDUFS2O75306 463 aa6.58□□□□□ -1.36
CTDNEP1-204ENST00000570484 RPP40O75818 363 aaKnown RBP6.58□□□□□ -1.36
CTDNEP1-204ENST00000570484 ZIC2O95409 532 aaPredicted RBP6.58□□□□□ -1.36
CTDNEP1-204ENST00000570484 PRAMEF1O95521 474 aa6.58□□□□□ -1.36
CTDNEP1-204ENST00000570484 PDGFBP01127 241 aaPredicted RBP6.58□□□□□ -1.36
CTDNEP1-204ENST00000570484 PRLP01236 227 aa6.58□□□□□ -1.36
CTDNEP1-204ENST00000570484 GSTA2P09210 222 aa6.58□□□□□ -1.36
CTDNEP1-204ENST00000570484 FAM153BP0C7A2 387 aa6.58□□□□□ -1.36
CTDNEP1-204ENST00000570484 TSHRP16473 764 aa6.58□□□□□ -1.36
CTDNEP1-204ENST00000570484 ITGALP20701 1170 aa6.58□□□□□ -1.36
CTDNEP1-204ENST00000570484 OXTRP30559 389 aa6.58□□□□□ -1.36
CTDNEP1-204ENST00000570484 HMGCLP35914 325 aa6.58□□□□□ -1.36
CTDNEP1-204ENST00000570484 SPAM1P38567 509 aa6.58□□□□□ -1.36
CTDNEP1-204ENST00000570484 CXCL12P48061 93 aa6.58□□□□□ -1.36
CTDNEP1-204ENST00000570484 ZNF140P52738 457 aaPredicted RBP6.58□□□□□ -1.36
CTDNEP1-204ENST00000570484 METAP1P53582 386 aa6.58□□□□□ -1.36
CTDNEP1-204ENST00000570484 ADPRHP54922 357 aa6.58□□□□□ -1.36
CTDNEP1-204ENST00000570484 WDR4P57081 412 aaKnown RBP6.58□□□□□ -1.36
CTDNEP1-204ENST00000570484 IHHQ14623 411 aa6.58□□□□□ -1.36
CTDNEP1-204ENST00000570484 FASTKD3Q14CZ7 662 aaKnown RBP6.58□□□□□ -1.36
CTDNEP1-204ENST00000570484 SMAD1Q15797 465 aaKnown RBP6.58□□□□□ -1.36
CTDNEP1-204ENST00000570484 CNGA3Q16281 694 aa6.58□□□□□ -1.36
CTDNEP1-204ENST00000570484 LONRF1Q17RB8 773 aa6.58□□□□□ -1.36
CTDNEP1-204ENST00000570484 KLHL38Q2WGJ6 581 aa6.58□□□□□ -1.36
CTDNEP1-204ENST00000570484 FAM153CQ494X1 144 aa6.58□□□□□ -1.36
CTDNEP1-204ENST00000570484 AARS2Q5JTZ9 985 aaKnown RBP6.58□□□□□ -1.36
CTDNEP1-204ENST00000570484 TSTD2Q5T7W7 516 aa6.58□□□□□ -1.36
CTDNEP1-204ENST00000570484 PIP5KL1Q5T9C9 394 aa6.58□□□□□ -1.36
CTDNEP1-204ENST00000570484 ALS2CLQ60I27 953 aa6.58□□□□□ -1.36
CTDNEP1-204ENST00000570484 PDPK2PQ6A1A2 396 aa6.58□□□□□ -1.36
CTDNEP1-204ENST00000570484 KIAA0930Q6ICG6 404 aaPredicted RBP6.58□□□□□ -1.36
CTDNEP1-204ENST00000570484 KIAA1161Q6NSJ0 714 aa6.58□□□□□ -1.36
CTDNEP1-204ENST00000570484 TAOK1Q7L7X3 1001 aa6.58□□□□□ -1.36
CTDNEP1-204ENST00000570484 TSPAN33Q86UF1 283 aa6.58□□□□□ -1.36
CTDNEP1-204ENST00000570484 RELL1Q8IUW5 271 aa6.58□□□□□ -1.36
CTDNEP1-204ENST00000570484 MPP5Q8N3R9 675 aa6.58□□□□□ -1.36
CTDNEP1-204ENST00000570484 CAMKK1Q8N5S9 505 aa6.58□□□□□ -1.36
CTDNEP1-204ENST00000570484 AADATQ8N5Z0 425 aa6.58□□□□□ -1.36
CTDNEP1-204ENST00000570484 MDGA1Q8NFP4 955 aa6.58□□□□□ -1.36
CTDNEP1-204ENST00000570484 OR6P1Q8NGX9 317 aa6.58□□□□□ -1.36
CTDNEP1-204ENST00000570484 CALML6Q8TD86 181 aa6.58□□□□□ -1.36
CTDNEP1-204ENST00000570484 STYXQ8WUJ0 223 aa6.58□□□□□ -1.36
CTDNEP1-204ENST00000570484 PEX13Q92968 403 aa6.58□□□□□ -1.36
CTDNEP1-204ENST00000570484 CLDN23Q96B33 292 aa6.58□□□□□ -1.36
CTDNEP1-204ENST00000570484 NUS1Q96E22 293 aa6.58□□□□□ -1.36
CTDNEP1-204ENST00000570484 DNAJC1Q96KC8 554 aaKnown RBP6.58□□□□□ -1.36
CTDNEP1-204ENST00000570484 NSMCE3Q96MG7 304 aa6.58□□□□□ -1.36
CTDNEP1-204ENST00000570484 TTC1Q99614 292 aa6.58□□□□□ -1.36
CTDNEP1-204ENST00000570484 CCDC77Q9BR77 488 aa6.58□□□□□ -1.36
CTDNEP1-204ENST00000570484 WRAP53Q9BUR4 548 aaKnown RBP6.58□□□□□ -1.36
CTDNEP1-204ENST00000570484 KIFC1Q9BW19 673 aa6.58□□□□□ -1.36
CTDNEP1-204ENST00000570484 TPSD1Q9BZJ3 242 aa6.58□□□□□ -1.36
CTDNEP1-204ENST00000570484 CDH19Q9H159 772 aa6.58□□□□□ -1.36
CTDNEP1-204ENST00000570484 SGK2Q9HBY8 427 aa6.58□□□□□ -1.36
CTDNEP1-204ENST00000570484 PREBQ9HCU5 417 aa6.58□□□□□ -1.36
CTDNEP1-204ENST00000570484 C20orf96Q9NUD7 363 aaPredicted RBP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms