RNA–Protein interactions for RNA: ENST00000569820.5

SPG7-222, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, human

TSL 5

Gene SPG7, Length 2,305 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPG7-222	ENST00000569820	TERB1	Q8NA31	727 aa		12.01	□□□□□ -0.49
SPG7-222	ENST00000569820	TNIP2	Q8NFZ5	429 aa		12.01	□□□□□ -0.49
SPG7-222	ENST00000569820	ADAMTS16	Q8TE57	1224 aa		12.01	□□□□□ -0.49
SPG7-222	ENST00000569820	C8orf48	Q96LL4	319 aa		12.01	□□□□□ -0.49
SPG7-222	ENST00000569820	PGLYRP2	Q96PD5	576 aa		12.01	□□□□□ -0.49
SPG7-222	ENST00000569820	SMOC2	Q9H3U7	446 aa		12.01	□□□□□ -0.49
SPG7-222	ENST00000569820	NMUR1	Q9HB89	426 aa		12.01	□□□□□ -0.49
SPG7-222	ENST00000569820	ABCC13	Q9NSE7	274 aa		12.01	□□□□□ -0.49
SPG7-222	ENST00000569820	ADA2	Q9NZK5	511 aa		12.01	□□□□□ -0.49
SPG7-222	ENST00000569820	IPO11	Q9UI26	975 aa	Known RBP	12.01	□□□□□ -0.49
SPG7-222	ENST00000569820	SHROOM3	Q8TF72	1996 aa		12	□□□□□ -0.49
SPG7-222	ENST00000569820		A0A0A0MRY4	1105 aa		12	□□□□□ -0.49
SPG7-222	ENST00000569820	LOC105371267	A0A1B0GV96	52 aa		12	□□□□□ -0.49
SPG7-222	ENST00000569820	E2F8	A0AVK6	867 aa		12	□□□□□ -0.49
SPG7-222	ENST00000569820	HOXA2	O43364	376 aa		12	□□□□□ -0.49
SPG7-222	ENST00000569820	CD247	P20963	164 aa		12	□□□□□ -0.49
SPG7-222	ENST00000569820	GABRB3	P28472	473 aa		12	□□□□□ -0.49
SPG7-222	ENST00000569820	TTK	P33981	857 aa		12	□□□□□ -0.49
SPG7-222	ENST00000569820	PBX3	P40426	434 aa		12	□□□□□ -0.49
SPG7-222	ENST00000569820	GLUD2	P49448	558 aa		12	□□□□□ -0.49
SPG7-222	ENST00000569820	BNIP3	Q12983	259 aa		12	□□□□□ -0.49
SPG7-222	ENST00000569820	HERC3	Q15034	1050 aa		12	□□□□□ -0.49
SPG7-222	ENST00000569820	AARS2	Q5JTZ9	985 aa	Known RBP	12	□□□□□ -0.49
SPG7-222	ENST00000569820	SDHAF4	Q5VUM1	108 aa		12	□□□□□ -0.49
SPG7-222	ENST00000569820	GPR107	Q5VW38	600 aa		12	□□□□□ -0.49
SPG7-222	ENST00000569820	FUT10	Q6P4F1	479 aa		12	□□□□□ -0.49
SPG7-222	ENST00000569820	ZBTB49	Q6ZSB9	765 aa		12	□□□□□ -0.49
SPG7-222	ENST00000569820	CPSF7	Q8N684	471 aa	Known RBP	12	□□□□□ -0.49
SPG7-222	ENST00000569820	NPW	Q8N729	165 aa		12	□□□□□ -0.49
SPG7-222	ENST00000569820	OR7G1	Q8NGA0	311 aa		12	□□□□□ -0.49
SPG7-222	ENST00000569820	BCL7C	Q8WUZ0	217 aa	Predicted RBP	12	□□□□□ -0.49
SPG7-222	ENST00000569820	SPATA13	Q96N96	652 aa		12	□□□□□ -0.49
SPG7-222	ENST00000569820	DOK1	Q99704	481 aa		12	□□□□□ -0.49
SPG7-222	ENST00000569820	MRPL9	Q9BYD2	267 aa	Known RBP	12	□□□□□ -0.49
SPG7-222	ENST00000569820	PRDM12	Q9H4Q4	367 aa		12	□□□□□ -0.49
SPG7-222	ENST00000569820	ZNF358	Q9NW07	568 aa		12	□□□□□ -0.49
SPG7-222	ENST00000569820	TXNDC16	Q9P2K2	825 aa		12	□□□□□ -0.49
SPG7-222	ENST00000569820	NEU3	Q9UQ49	428 aa		12	□□□□□ -0.49
SPG7-222	ENST00000569820	TMA7	Q9Y2S6	64 aa	Known RBP	12	□□□□□ -0.49
SPG7-222	ENST00000569820	PCDHB5	Q9Y5E4	795 aa		12	□□□□□ -0.49
SPG7-222	ENST00000569820	MYO18A	Q92614	2054 aa	Known RBP	12	□□□□□ -0.49
SPG7-222	ENST00000569820	WDR27	A2RRH5	827 aa		12	□□□□□ -0.49
SPG7-222	ENST00000569820	OR6C75	A6NL08	312 aa		12	□□□□□ -0.49
SPG7-222	ENST00000569820		J3QRK9	145 aa		12	□□□□□ -0.49
SPG7-222	ENST00000569820	HDAC3	O15379	428 aa		12	□□□□□ -0.49
SPG7-222	ENST00000569820	ALDH1A2	O94788	518 aa		12	□□□□□ -0.49
SPG7-222	ENST00000569820	LRIG2	O94898	1065 aa		12	□□□□□ -0.49
SPG7-222	ENST00000569820	GALT	P07902	379 aa		12	□□□□□ -0.49
SPG7-222	ENST00000569820	TPSB2	P20231	275 aa		12	□□□□□ -0.49
SPG7-222	ENST00000569820	DCK	P27707	260 aa		12	□□□□□ -0.49
SPG7-222	ENST00000569820	ADSL	P30566	484 aa	Predicted RBP	12	□□□□□ -0.49
SPG7-222	ENST00000569820	CYP2C18	P33260	490 aa		12	□□□□□ -0.49
SPG7-222	ENST00000569820	GMPR	P36959	345 aa		12	□□□□□ -0.49
SPG7-222	ENST00000569820	GRIA1	P42261	906 aa		12	□□□□□ -0.49
SPG7-222	ENST00000569820	MAGEA11	P43364	429 aa		12	□□□□□ -0.49
SPG7-222	ENST00000569820	BMX	P51813	675 aa		12	□□□□□ -0.49
SPG7-222	ENST00000569820	CTAG1A	P78358	180 aa		12	□□□□□ -0.49
SPG7-222	ENST00000569820	RHD	Q02161	417 aa		12	□□□□□ -0.49
SPG7-222	ENST00000569820	SEMA5A	Q13591	1074 aa		12	□□□□□ -0.49
SPG7-222	ENST00000569820	TPSAB1	Q15661	275 aa		12	□□□□□ -0.49
SPG7-222	ENST00000569820	DDR2	Q16832	855 aa		12	□□□□□ -0.49
SPG7-222	ENST00000569820	TRIM60	Q495X7	471 aa		12	□□□□□ -0.49
SPG7-222	ENST00000569820	NHSL2	Q5HYW2	709 aa		12	□□□□□ -0.49
SPG7-222	ENST00000569820	RTP2	Q5QGT7	225 aa		12	□□□□□ -0.49
SPG7-222	ENST00000569820	BTBD8	Q5XKL5	378 aa		12	□□□□□ -0.49
SPG7-222	ENST00000569820	SEL1L3	Q68CR1	1132 aa		12	□□□□□ -0.49
SPG7-222	ENST00000569820	RSPO2	Q6UXX9	243 aa	Predicted RBP	12	□□□□□ -0.49
SPG7-222	ENST00000569820	HERC6	Q8IVU3	1022 aa		12	□□□□□ -0.49
SPG7-222	ENST00000569820	ATAD1	Q8NBU5	361 aa		12	□□□□□ -0.49
SPG7-222	ENST00000569820	FBXL8	Q96CD0	374 aa		12	□□□□□ -0.49
SPG7-222	ENST00000569820	P2RY11	Q96G91	374 aa		12	□□□□□ -0.49
SPG7-222	ENST00000569820	MED30	Q96HR3	178 aa		12	□□□□□ -0.49
SPG7-222	ENST00000569820	TMEM175	Q9BSA9	504 aa		12	□□□□□ -0.49
SPG7-222	ENST00000569820	NPL	Q9BXD5	320 aa	Predicted RBP	12	□□□□□ -0.49
SPG7-222	ENST00000569820	ILKAP	Q9H0C8	392 aa	Predicted RBP	12	□□□□□ -0.49
SPG7-222	ENST00000569820	OSER1	Q9NX31	292 aa		12	□□□□□ -0.49
SPG7-222	ENST00000569820	DUS2	Q9NX74	493 aa	Known RBP	12	□□□□□ -0.49
SPG7-222	ENST00000569820	SUCO	Q9UBS9	1254 aa	Known RBP	12	□□□□□ -0.49
SPG7-222	ENST00000569820	OR12D3	Q9UGF7	316 aa		12	□□□□□ -0.49
SPG7-222	ENST00000569820	SCML2	Q9UQR0	700 aa		12	□□□□□ -0.49
SPG7-222	ENST00000569820	PSAT1	Q9Y617	370 aa		12	□□□□□ -0.49
SPG7-222	ENST00000569820		A0A1W2PQH9	124 aa		11.99	□□□□□ -0.49
SPG7-222	ENST00000569820	NT5C1B-RDH14	C9J2C7	533 aa		11.99	□□□□□ -0.49
SPG7-222	ENST00000569820	CFAP99	D6REC4	459 aa		11.99	□□□□□ -0.49
SPG7-222	ENST00000569820	RNF103	O00237	685 aa		11.99	□□□□□ -0.49
SPG7-222	ENST00000569820	MSI1	O43347	362 aa	Known RBP	11.99	□□□□□ -0.49
SPG7-222	ENST00000569820	TBC1D4	O60343	1298 aa		11.99	□□□□□ -0.49
SPG7-222	ENST00000569820	NOL3	O60936	208 aa	Known RBP	11.99	□□□□□ -0.49
SPG7-222	ENST00000569820	VNN2	O95498	520 aa		11.99	□□□□□ -0.49
SPG7-222	ENST00000569820	CHRNB1	P11230	501 aa		11.99	□□□□□ -0.49
SPG7-222	ENST00000569820	TUFM	P49411	452 aa	Known RBP	11.99	□□□□□ -0.49
SPG7-222	ENST00000569820	ZNF135	P52742	658 aa	Predicted RBP	11.99	□□□□□ -0.49
SPG7-222	ENST00000569820	TLE2	Q04725	743 aa		11.99	□□□□□ -0.49
SPG7-222	ENST00000569820	TRIM25	Q14258	630 aa	Known RBP	11.99	□□□□□ -0.49
SPG7-222	ENST00000569820	CYP2A13	Q16696	494 aa		11.99	□□□□□ -0.49
SPG7-222	ENST00000569820	STEAP4	Q687X5	459 aa		11.99	□□□□□ -0.49
SPG7-222	ENST00000569820	SIGIRR	Q6IA17	410 aa		11.99	□□□□□ -0.49
SPG7-222	ENST00000569820	TTC23L	Q6PF05	361 aa		11.99	□□□□□ -0.49
SPG7-222	ENST00000569820	ZNF354C	Q86Y25	554 aa		11.99	□□□□□ -0.49
SPG7-222	ENST00000569820	CNTD1	Q8N815	330 aa		11.99	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms