RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 ZBTB32Q9Y2Y4 487 aaPredicted RBP23.43■■□□□ 1.34
RAB40C-212ENST00000569575 MUC3AQ02505 3323 aa23.43■■□□□ 1.34
RAB40C-212ENST00000569575 IGLON5A6NGN9 336 aa23.42■■□□□ 1.34
RAB40C-212ENST00000569575 FAM47DPA6NHR8 397 aa23.42■■□□□ 1.34
RAB40C-212ENST00000569575 RECQL5O94762 991 aaPredicted RBP23.42■■□□□ 1.34
RAB40C-212ENST00000569575 POLBP06746 335 aa23.42■■□□□ 1.34
RAB40C-212ENST00000569575 PIRTP0C851 137 aa23.42■■□□□ 1.34
RAB40C-212ENST00000569575 SLMAPQ14BN4 828 aa23.42■■□□□ 1.34
RAB40C-212ENST00000569575 CCDC38Q502W7 563 aa23.42■■□□□ 1.34
RAB40C-212ENST00000569575 TSTD2Q5T7W7 516 aa23.42■■□□□ 1.34
RAB40C-212ENST00000569575 GABPB2Q8TAK5 448 aaPredicted RBP23.42■■□□□ 1.34
RAB40C-212ENST00000569575 STAMBPL1Q96FJ0 436 aa23.42■■□□□ 1.34
RAB40C-212ENST00000569575 FAM83DQ9H4H8 585 aa23.42■■□□□ 1.34
RAB40C-212ENST00000569575 CD93Q9NPY3 652 aa23.42■■□□□ 1.34
RAB40C-212ENST00000569575 GGT7Q9UJ14 662 aa23.42■■□□□ 1.34
RAB40C-212ENST00000569575 ZFR2Q9UPR6 939 aaKnown RBP23.42■■□□□ 1.34
RAB40C-212ENST00000569575 HS3ST3A1Q9Y663 406 aa23.42■■□□□ 1.34
RAB40C-212ENST00000569575 NUMA1Q14980 2115 aa23.42■■□□□ 1.34
RAB40C-212ENST00000569575 PRAMEF26H0Y7S4 382 aa23.41■■□□□ 1.34
RAB40C-212ENST00000569575 AVILO75366 819 aa23.41■■□□□ 1.34
RAB40C-212ENST00000569575 USP1O94782 785 aa23.41■■□□□ 1.34
RAB40C-212ENST00000569575 GSTA2P09210 222 aa23.41■■□□□ 1.34
RAB40C-212ENST00000569575 C1SP09871 688 aa23.41■■□□□ 1.34
RAB40C-212ENST00000569575 PGAM1P18669 254 aa23.41■■□□□ 1.34
RAB40C-212ENST00000569575 CD27P26842 260 aa23.41■■□□□ 1.34
RAB40C-212ENST00000569575 ZNF140P52738 457 aaPredicted RBP23.41■■□□□ 1.34
RAB40C-212ENST00000569575 PDIA2Q13087 525 aaKnown RBP23.41■■□□□ 1.34
RAB40C-212ENST00000569575 SEPT6Q14141 434 aa23.41■■□□□ 1.34
RAB40C-212ENST00000569575 FRG1Q14331 258 aaKnown RBP23.41■■□□□ 1.34
RAB40C-212ENST00000569575 LRRC14Q15048 493 aa23.41■■□□□ 1.34
RAB40C-212ENST00000569575 TRADDQ15628 312 aa23.41■■□□□ 1.34
RAB40C-212ENST00000569575 FNBP1LQ5T0N5 605 aa23.41■■□□□ 1.34
RAB40C-212ENST00000569575 CASC4Q6P4E1 433 aa23.41■■□□□ 1.34
RAB40C-212ENST00000569575 HSD11B1LQ7Z5J1 315 aa23.41■■□□□ 1.34
RAB40C-212ENST00000569575 SCG3Q8WXD2 468 aaKnown RBP23.41■■□□□ 1.34
RAB40C-212ENST00000569575 DNASE2BQ8WZ79 361 aa23.41■■□□□ 1.34
RAB40C-212ENST00000569575 BIRC7Q96CA5 298 aa23.41■■□□□ 1.34
RAB40C-212ENST00000569575 NUS1Q96E22 293 aa23.41■■□□□ 1.34
RAB40C-212ENST00000569575 ZSCAN5AQ9BUG6 496 aa23.41■■□□□ 1.34
RAB40C-212ENST00000569575 C6orf106Q9H6K1 298 aaPredicted RBP23.41■■□□□ 1.34
RAB40C-212ENST00000569575 ANKZF1Q9H8Y5 726 aa23.41■■□□□ 1.34
RAB40C-212ENST00000569575 SYBUQ9NX95 663 aa23.41■■□□□ 1.34
RAB40C-212ENST00000569575 ARL5AQ9Y689 179 aa23.41■■□□□ 1.34
RAB40C-212ENST00000569575 TEX264Q9Y6I9 313 aa23.41■■□□□ 1.34
RAB40C-212ENST00000569575 CUL9Q8IWT3 2517 aa23.41■■□□□ 1.34
RAB40C-212ENST00000569575 A0A1W2PPC4 97 aa23.4■■□□□ 1.34
RAB40C-212ENST00000569575 A8MX80 341 aa23.4■■□□□ 1.34
RAB40C-212ENST00000569575 IGHV4-34P06331 123 aa23.4■■□□□ 1.34
RAB40C-212ENST00000569575 TSHRP16473 764 aa23.4■■□□□ 1.34
RAB40C-212ENST00000569575 HNRNPA2B1P22626 353 aaKnown RBP23.4■■□□□ 1.34
RAB40C-212ENST00000569575 AKT2P31751 481 aa23.4■■□□□ 1.34
RAB40C-212ENST00000569575 SPAM1P38567 509 aa23.4■■□□□ 1.34
RAB40C-212ENST00000569575 CARSP49589 748 aaKnown RBP23.4■■□□□ 1.34
RAB40C-212ENST00000569575 DHX9Q08211 1270 aaKnown RBP23.4■■□□□ 1.34
RAB40C-212ENST00000569575 BBS9Q3SYG4 887 aa23.4■■□□□ 1.34
RAB40C-212ENST00000569575 PMS2CLQ68D20 193 aa23.4■■□□□ 1.34
RAB40C-212ENST00000569575 Q6ZVL8 140 aa23.4■■□□□ 1.34
RAB40C-212ENST00000569575 LMNTD2Q8IXW0 634 aa23.4■■□□□ 1.34
RAB40C-212ENST00000569575 FAM160A2Q8N612 972 aaPredicted RBP23.4■■□□□ 1.34
RAB40C-212ENST00000569575 OR4K2Q8NGD2 314 aa23.4■■□□□ 1.34
RAB40C-212ENST00000569575 EID2BQ96D98 161 aa23.4■■□□□ 1.34
RAB40C-212ENST00000569575 LOXL4Q96JB6 756 aa23.4■■□□□ 1.34
RAB40C-212ENST00000569575 CHRAC1Q9NRG0 131 aa23.4■■□□□ 1.34
RAB40C-212ENST00000569575 TREX1Q9NSU2 369 aa23.4■■□□□ 1.34
RAB40C-212ENST00000569575 PIH1D1Q9NWS0 290 aaKnown RBP23.4■■□□□ 1.34
RAB40C-212ENST00000569575 MAD1L1Q9Y6D9 718 aa23.4■■□□□ 1.34
RAB40C-212ENST00000569575 AURKAO14965 403 aa23.39■■□□□ 1.33
RAB40C-212ENST00000569575 HRO43593 1189 aa23.39■■□□□ 1.33
RAB40C-212ENST00000569575 SPAG6O75602 509 aa23.39■■□□□ 1.33
RAB40C-212ENST00000569575 HOXD12P35452 270 aa23.39■■□□□ 1.33
RAB40C-212ENST00000569575 OVGP1Q12889 678 aa23.39■■□□□ 1.33
RAB40C-212ENST00000569575 ITGA9Q13797 1035 aa23.39■■□□□ 1.33
RAB40C-212ENST00000569575 KCTD19Q17RG1 926 aaPredicted RBP23.39■■□□□ 1.33
RAB40C-212ENST00000569575 ERCC6LQ2NKX8 1250 aa23.39■■□□□ 1.33
RAB40C-212ENST00000569575 SPANXN3Q5MJ09 141 aa23.39■■□□□ 1.33
RAB40C-212ENST00000569575 SEL1L3Q68CR1 1132 aa23.39■■□□□ 1.33
RAB40C-212ENST00000569575 ESRP1Q6NXG1 681 aaKnown RBP23.39■■□□□ 1.33
RAB40C-212ENST00000569575 ZNF449Q6P9G9 518 aa23.39■■□□□ 1.33
RAB40C-212ENST00000569575 CCNI2Q6ZMN8 369 aaPredicted RBP23.39■■□□□ 1.33
RAB40C-212ENST00000569575 CYS1Q717R9 158 aa23.39■■□□□ 1.33
RAB40C-212ENST00000569575 CEP68Q76N32 757 aa23.39■■□□□ 1.33
RAB40C-212ENST00000569575 TRAM1L1Q8N609 369 aa23.39■■□□□ 1.33
RAB40C-212ENST00000569575 PYROXD1Q8WU10 500 aa23.39■■□□□ 1.33
RAB40C-212ENST00000569575 CENPTQ96BT3 561 aa23.39■■□□□ 1.33
RAB40C-212ENST00000569575 CDKN2AIPNLQ96HQ2 116 aa23.39■■□□□ 1.33
RAB40C-212ENST00000569575 SEMA4AQ9H3S1 761 aa23.39■■□□□ 1.33
RAB40C-212ENST00000569575 FAM169AQ9Y6X4 670 aa23.39■■□□□ 1.33
RAB40C-212ENST00000569575 FANCMQ8IYD8 2048 aa23.38■■□□□ 1.33
RAB40C-212ENST00000569575 PRR23AA6NEV1 266 aa23.38■■□□□ 1.33
RAB40C-212ENST00000569575 FSBPO95073 299 aa23.38■■□□□ 1.33
RAB40C-212ENST00000569575 PAK4O96013 591 aaPredicted RBP23.38■■□□□ 1.33
RAB40C-212ENST00000569575 BPIP17213 487 aa23.38■■□□□ 1.33
RAB40C-212ENST00000569575 ECHS1P30084 290 aa23.38■■□□□ 1.33
RAB40C-212ENST00000569575 ETV3P41162 512 aa23.38■■□□□ 1.33
RAB40C-212ENST00000569575 PPP2CBP62714 309 aa23.38■■□□□ 1.33
RAB40C-212ENST00000569575 PPP2CAP67775 309 aa23.38■■□□□ 1.33
RAB40C-212ENST00000569575 MTM1Q13496 603 aa23.38■■□□□ 1.33
RAB40C-212ENST00000569575 PLK5Q496M5 336 aa23.38■■□□□ 1.33
RAB40C-212ENST00000569575 GPR33Q49SQ1 333 aa23.38■■□□□ 1.33
RAB40C-212ENST00000569575 HENMT1Q5T8I9 393 aaKnown RBP23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms