RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 RIOX1Q9H6W3 641 aa7.11□□□□□ -1.27
CNOT1-216ENST00000569240 ZNF334Q9HCZ1 680 aaPredicted RBP7.11□□□□□ -1.27
CNOT1-216ENST00000569240 IL1RAPQ9NPH3 570 aa7.11□□□□□ -1.27
CNOT1-216ENST00000569240 RGS17Q9UGC6 210 aaPredicted RBP7.11□□□□□ -1.27
CNOT1-216ENST00000569240 DYRK1BQ9Y463 629 aa7.11□□□□□ -1.27
CNOT1-216ENST00000569240 A3GALT2U3KPV4 340 aa7.11□□□□□ -1.27
CNOT1-216ENST00000569240 KRBOX1C9JBD0 128 aa7.11□□□□□ -1.27
CNOT1-216ENST00000569240 SULT1C2O00338 296 aa7.11□□□□□ -1.27
CNOT1-216ENST00000569240 RIMBP2O15034 1052 aa7.11□□□□□ -1.27
CNOT1-216ENST00000569240 USP12O75317 370 aa7.11□□□□□ -1.27
CNOT1-216ENST00000569240 LCN1P31025 176 aa7.11□□□□□ -1.27
CNOT1-216ENST00000569240 RALGDSQ12967 914 aa7.11□□□□□ -1.27
CNOT1-216ENST00000569240 MKRN4PQ13434 485 aaPredicted RBP7.11□□□□□ -1.27
CNOT1-216ENST00000569240 MAMLD1Q13495 774 aa7.11□□□□□ -1.27
CNOT1-216ENST00000569240 PTCHD4Q6ZW05 846 aa7.11□□□□□ -1.27
CNOT1-216ENST00000569240 RNF148Q8N7C7 305 aa7.11□□□□□ -1.27
CNOT1-216ENST00000569240 ANKFN1Q8N957 763 aa7.11□□□□□ -1.27
CNOT1-216ENST00000569240 ZSWIM2Q8NEG5 633 aa7.11□□□□□ -1.27
CNOT1-216ENST00000569240 ADAM32Q8TC27 787 aa7.11□□□□□ -1.27
CNOT1-216ENST00000569240 C11orf24Q96F05 449 aaPredicted RBP7.11□□□□□ -1.27
CNOT1-216ENST00000569240 COPS4Q9BT78 406 aa7.11□□□□□ -1.27
CNOT1-216ENST00000569240 ADAM33Q9BZ11 813 aa7.11□□□□□ -1.27
CNOT1-216ENST00000569240 ALG2Q9H553 416 aa7.11□□□□□ -1.27
CNOT1-216ENST00000569240 PCDHGA11Q9Y5H2 935 aa7.11□□□□□ -1.27
CNOT1-216ENST00000569240 K7EPI3 171 aa7.11□□□□□ -1.27
CNOT1-216ENST00000569240 SRPRAP08240 638 aaKnown RBP7.11□□□□□ -1.27
CNOT1-216ENST00000569240 CD36P16671 472 aa7.11□□□□□ -1.27
CNOT1-216ENST00000569240 S100GP29377 79 aa7.11□□□□□ -1.27
CNOT1-216ENST00000569240 ASMTP46597 345 aa7.11□□□□□ -1.27
CNOT1-216ENST00000569240 PPP3CCP48454 512 aa7.11□□□□□ -1.27
CNOT1-216ENST00000569240 MED22Q15528 200 aa7.11□□□□□ -1.27
CNOT1-216ENST00000569240 RNASEH2BQ5TBB1 312 aaKnown RBP7.11□□□□□ -1.27
CNOT1-216ENST00000569240 PPP2R2DQ66LE6 453 aa7.11□□□□□ -1.27
CNOT1-216ENST00000569240 OR52E8Q6IFG1 317 aa7.11□□□□□ -1.27
CNOT1-216ENST00000569240 KDELC2Q7Z4H8 507 aa7.11□□□□□ -1.27
CNOT1-216ENST00000569240 SYVN1Q86TM6 617 aa7.11□□□□□ -1.27
CNOT1-216ENST00000569240 GPR180Q86V85 440 aa7.11□□□□□ -1.27
CNOT1-216ENST00000569240 DCP1BQ8IZD4 617 aaKnown RBP7.11□□□□□ -1.27
CNOT1-216ENST00000569240 ZNF606Q8WXB4 792 aa7.11□□□□□ -1.27
CNOT1-216ENST00000569240 NSUN4Q96CB9 384 aaKnown RBP7.11□□□□□ -1.27
CNOT1-216ENST00000569240 KCTD7Q96MP8 289 aa7.11□□□□□ -1.27
CNOT1-216ENST00000569240 ASB7Q9H672 318 aa7.11□□□□□ -1.27
CNOT1-216ENST00000569240 FARSBQ9NSD9 589 aaKnown RBP7.11□□□□□ -1.27
CNOT1-216ENST00000569240 SNTG2Q9NY99 539 aa7.11□□□□□ -1.27
CNOT1-216ENST00000569240 NKX1-2Q9UD57 310 aaPredicted RBP7.11□□□□□ -1.27
CNOT1-216ENST00000569240 PRKAG2Q9UGJ0 569 aa7.11□□□□□ -1.27
CNOT1-216ENST00000569240 A0A0J9YYE9 177 aa7.11□□□□□ -1.27
CNOT1-216ENST00000569240 SLC28A2O43868 658 aa7.11□□□□□ -1.27
CNOT1-216ENST00000569240 SOX30O94993 753 aa7.11□□□□□ -1.27
CNOT1-216ENST00000569240 SLC2A2P11168 524 aaPredicted RBP7.11□□□□□ -1.27
CNOT1-216ENST00000569240 GSTM2P28161 218 aa7.11□□□□□ -1.27
CNOT1-216ENST00000569240 GMPRP36959 345 aa7.11□□□□□ -1.27
CNOT1-216ENST00000569240 MTHFRP42898 656 aa7.11□□□□□ -1.27
CNOT1-216ENST00000569240 SLC26A2P50443 739 aa7.11□□□□□ -1.27
CNOT1-216ENST00000569240 ZNF143P52747 638 aaPredicted RBP7.11□□□□□ -1.27
CNOT1-216ENST00000569240 LIMK2P53671 638 aa7.11□□□□□ -1.27
CNOT1-216ENST00000569240 DCDC1P59894 354 aa7.11□□□□□ -1.27
CNOT1-216ENST00000569240 CREMQ03060 361 aa7.11□□□□□ -1.27
CNOT1-216ENST00000569240 TRAM1Q15629 374 aa7.11□□□□□ -1.27
CNOT1-216ENST00000569240 SV2AQ7L0J3 742 aa7.11□□□□□ -1.27
CNOT1-216ENST00000569240 ASB15Q8WXK1 588 aa7.11□□□□□ -1.27
CNOT1-216ENST00000569240 ZNF607Q96SK3 696 aa7.11□□□□□ -1.27
CNOT1-216ENST00000569240 MAPKAP1Q9BPZ7 522 aa7.11□□□□□ -1.27
CNOT1-216ENST00000569240 LRRC3Q9BY71 257 aa7.11□□□□□ -1.27
CNOT1-216ENST00000569240 NT5DC2Q9H857 520 aa7.11□□□□□ -1.27
CNOT1-216ENST00000569240 SNX15Q9NRS6 342 aa7.11□□□□□ -1.27
CNOT1-216ENST00000569240 PLEKHA6Q9Y2H5 1048 aa7.11□□□□□ -1.27
CNOT1-216ENST00000569240 HSPB11Q9Y547 144 aa7.11□□□□□ -1.27
CNOT1-216ENST00000569240 WDR27A2RRH5 827 aa7.11□□□□□ -1.27
CNOT1-216ENST00000569240 F5H6K3 240 aa7.11□□□□□ -1.27
CNOT1-216ENST00000569240 IFNGP01579 166 aa7.11□□□□□ -1.27
CNOT1-216ENST00000569240 PRPS2P11908 318 aa7.11□□□□□ -1.27
CNOT1-216ENST00000569240 KCNA10Q16322 511 aa7.11□□□□□ -1.27
CNOT1-216ENST00000569240 FAM76BQ5HYJ3 339 aa7.11□□□□□ -1.27
CNOT1-216ENST00000569240 ADGRD2Q7Z7M1 963 aa7.11□□□□□ -1.27
CNOT1-216ENST00000569240 CPNE9Q8IYJ1 553 aa7.11□□□□□ -1.27
CNOT1-216ENST00000569240 GDPD1Q8N9F7 314 aa7.11□□□□□ -1.27
CNOT1-216ENST00000569240 FBXO30Q8TB52 745 aa7.11□□□□□ -1.27
CNOT1-216ENST00000569240 DNAJC1Q96KC8 554 aaKnown RBP7.11□□□□□ -1.27
CNOT1-216ENST00000569240 MARK4Q96L34 752 aa7.11□□□□□ -1.27
CNOT1-216ENST00000569240 LENG8Q96PV6 779 aaPredicted RBP7.11□□□□□ -1.27
CNOT1-216ENST00000569240 HERC2P3Q9BVR0 1158 aa7.11□□□□□ -1.27
CNOT1-216ENST00000569240 ZNF335Q9H4Z2 1342 aaPredicted RBP7.1□□□□□ -1.27
CNOT1-216ENST00000569240 TNFRSF10AO00220 468 aa7.1□□□□□ -1.27
CNOT1-216ENST00000569240 AP1G1O43747 822 aa7.1□□□□□ -1.27
CNOT1-216ENST00000569240 RP2O75695 350 aa7.1□□□□□ -1.27
CNOT1-216ENST00000569240 DGKAP23743 735 aa7.1□□□□□ -1.27
CNOT1-216ENST00000569240 PPP3R1P63098 170 aa7.1□□□□□ -1.27
CNOT1-216ENST00000569240 SREBF2Q12772 1141 aa7.1□□□□□ -1.27
CNOT1-216ENST00000569240 DCDC5Q6ZRR9 648 aa7.1□□□□□ -1.27
CNOT1-216ENST00000569240 CHST15Q7LFX5 561 aaPredicted RBP7.1□□□□□ -1.27
CNOT1-216ENST00000569240 ZNF781Q8N8C0 355 aa7.1□□□□□ -1.27
CNOT1-216ENST00000569240 TNFAIP8L1Q8WVP5 186 aa7.1□□□□□ -1.27
CNOT1-216ENST00000569240 KIF12Q96FN5 646 aa7.1□□□□□ -1.27
CNOT1-216ENST00000569240 THUMPD1Q9NXG2 353 aaKnown RBP7.1□□□□□ -1.27
CNOT1-216ENST00000569240 INMTO95050 263 aa7.1□□□□□ -1.27
CNOT1-216ENST00000569240 OXSR1O95747 527 aaPredicted RBP7.1□□□□□ -1.27
CNOT1-216ENST00000569240 FABP3P05413 133 aa7.1□□□□□ -1.27
CNOT1-216ENST00000569240 XRCC1P18887 633 aaPredicted RBP7.1□□□□□ -1.27
CNOT1-216ENST00000569240 FEN1P39748 380 aaKnown RBP7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms