RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 COL28A1Q2UY09 1125 aa7.81□□□□□ -1.16
CDH3-209ENST00000569080 TBC1D25Q3MII6 688 aa7.81□□□□□ -1.16
CDH3-209ENST00000569080 OGFOD3Q6PK18 319 aa7.81□□□□□ -1.16
CDH3-209ENST00000569080 C19orf48Q6RUI8 117 aa7.81□□□□□ -1.16
CDH3-209ENST00000569080 IGF2-ASQ6U949 168 aa7.81□□□□□ -1.16
CDH3-209ENST00000569080 MFSD7Q6UXD7 560 aa7.81□□□□□ -1.16
CDH3-209ENST00000569080 NPNTQ6UXI9 565 aa7.81□□□□□ -1.16
CDH3-209ENST00000569080 RD3Q7Z3Z2 195 aa7.81□□□□□ -1.16
CDH3-209ENST00000569080 C17orf82Q86X59 251 aaPredicted RBP7.81□□□□□ -1.16
CDH3-209ENST00000569080 NRROSQ86YC3 692 aa7.81□□□□□ -1.16
CDH3-209ENST00000569080 PAF1Q8N7H5 531 aa7.81□□□□□ -1.16
CDH3-209ENST00000569080 ATL2Q8NHH9 583 aa7.81□□□□□ -1.16
CDH3-209ENST00000569080 CCDC74AQ96AQ1 378 aa7.81□□□□□ -1.16
CDH3-209ENST00000569080 SCARF2Q96GP6 870 aaPredicted RBP7.81□□□□□ -1.16
CDH3-209ENST00000569080 CRELD1Q96HD1 420 aa7.81□□□□□ -1.16
CDH3-209ENST00000569080 PRR11Q96HE9 360 aaPredicted RBP7.81□□□□□ -1.16
CDH3-209ENST00000569080 HIC2Q96JB3 615 aa7.81□□□□□ -1.16
CDH3-209ENST00000569080 DEPDC7Q96QD5 511 aa7.81□□□□□ -1.16
CDH3-209ENST00000569080 WDR24Q96S15 920 aa7.81□□□□□ -1.16
CDH3-209ENST00000569080 AGAP2Q99490 1192 aa7.81□□□□□ -1.16
CDH3-209ENST00000569080 CCDC3Q9BQI4 270 aa7.81□□□□□ -1.16
CDH3-209ENST00000569080 BRD8Q9H0E9 1235 aa7.81□□□□□ -1.16
CDH3-209ENST00000569080 TMEM168Q9H0V1 697 aa7.81□□□□□ -1.16
CDH3-209ENST00000569080 ASCL3Q9NQ33 180 aa7.81□□□□□ -1.16
CDH3-209ENST00000569080 EVA1BQ9NVM1 165 aa7.81□□□□□ -1.16
CDH3-209ENST00000569080 SIRPGQ9P1W8 387 aa7.81□□□□□ -1.16
CDH3-209ENST00000569080 PADI4Q9UM07 663 aa7.81□□□□□ -1.16
CDH3-209ENST00000569080 TFR2Q9UP52 801 aa7.81□□□□□ -1.16
CDH3-209ENST00000569080 LHX6Q9UPM6 363 aa7.81□□□□□ -1.16
CDH3-209ENST00000569080 CHKBQ9Y259 395 aa7.81□□□□□ -1.16
CDH3-209ENST00000569080 ENTPD2Q9Y5L3 495 aa7.81□□□□□ -1.16
CDH3-209ENST00000569080 A0A1W2PQM1 296 aa7.8□□□□□ -1.16
CDH3-209ENST00000569080 RCCD1A6NED2 376 aa7.8□□□□□ -1.16
CDH3-209ENST00000569080 D6RAR5 112 aa7.8□□□□□ -1.16
CDH3-209ENST00000569080 APOL1O14791 398 aa7.8□□□□□ -1.16
CDH3-209ENST00000569080 PSTPIP1O43586 416 aa7.8□□□□□ -1.16
CDH3-209ENST00000569080 TNFP01375 233 aa7.8□□□□□ -1.16
CDH3-209ENST00000569080 JCHAINP01591 159 aa7.8□□□□□ -1.16
CDH3-209ENST00000569080 MPOP05164 745 aa7.8□□□□□ -1.16
CDH3-209ENST00000569080 IVLP07476 585 aa7.8□□□□□ -1.16
CDH3-209ENST00000569080 CTSEP14091 401 aa7.8□□□□□ -1.16
CDH3-209ENST00000569080 PECAM1P16284 738 aaPredicted RBP7.8□□□□□ -1.16
CDH3-209ENST00000569080 ZNF30P17039 623 aa7.8□□□□□ -1.16
CDH3-209ENST00000569080 CES1P23141 567 aa7.8□□□□□ -1.16
CDH3-209ENST00000569080 CD86P42081 329 aa7.8□□□□□ -1.16
CDH3-209ENST00000569080 NOP2P46087 812 aaKnown RBP7.8□□□□□ -1.16
CDH3-209ENST00000569080 RPIAP49247 311 aa7.8□□□□□ -1.16
CDH3-209ENST00000569080 RPL26P61254 145 aaKnown RBP7.8□□□□□ -1.16
CDH3-209ENST00000569080 GABREP78334 506 aa7.8□□□□□ -1.16
CDH3-209ENST00000569080 HLTFQ14527 1009 aaKnown RBP eCLIP7.8□□□□□ -1.16
CDH3-209ENST00000569080 PRKD1Q15139 912 aaPredicted RBP7.8□□□□□ -1.16
CDH3-209ENST00000569080 SLC14A2Q15849 920 aa7.8□□□□□ -1.16
CDH3-209ENST00000569080 QPCTQ16769 361 aa7.8□□□□□ -1.16
CDH3-209ENST00000569080 CERCAMQ5T4B2 595 aa7.8□□□□□ -1.16
CDH3-209ENST00000569080 DENND2CQ68D51 928 aa7.8□□□□□ -1.16
CDH3-209ENST00000569080 RAET1GQ6H3X3 334 aa7.8□□□□□ -1.16
CDH3-209ENST00000569080 C11orf63Q6NUN7 778 aa7.8□□□□□ -1.16
CDH3-209ENST00000569080 ADAMTSL4Q6UY14 1074 aa7.8□□□□□ -1.16
CDH3-209ENST00000569080 RBM44Q6ZP01 1051 aaKnown RBP7.8□□□□□ -1.16
CDH3-209ENST00000569080 ZNF765Q7L2R6 523 aa7.8□□□□□ -1.16
CDH3-209ENST00000569080 ZNF438Q7Z4V0 828 aa7.8□□□□□ -1.16
CDH3-209ENST00000569080 B3GNT8Q7Z7M8 397 aa7.8□□□□□ -1.16
CDH3-209ENST00000569080 TRIM74Q86UV6 250 aa7.8□□□□□ -1.16
CDH3-209ENST00000569080 GKN2Q86XP6 184 aa7.8□□□□□ -1.16
CDH3-209ENST00000569080 RHOT1Q8IXI2 618 aa7.8□□□□□ -1.16
CDH3-209ENST00000569080 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.8□□□□□ -1.16
CDH3-209ENST00000569080 LPCAT1Q8NF37 534 aa7.8□□□□□ -1.16
CDH3-209ENST00000569080 GPBAR1Q8TDU6 330 aa7.8□□□□□ -1.16
CDH3-209ENST00000569080 SCAMP4Q969E2 229 aa7.8□□□□□ -1.16
CDH3-209ENST00000569080 RNF25Q96BH1 459 aaPredicted RBP7.8□□□□□ -1.16
CDH3-209ENST00000569080 EID2BQ96D98 161 aa7.8□□□□□ -1.16
CDH3-209ENST00000569080 IMP4Q96G21 291 aaKnown RBP7.8□□□□□ -1.16
CDH3-209ENST00000569080 ATXN7L3BQ96GX2 97 aa7.8□□□□□ -1.16
CDH3-209ENST00000569080 MRFAP1L1Q96HT8 127 aa7.8□□□□□ -1.16
CDH3-209ENST00000569080 COX14Q96I36 57 aa7.8□□□□□ -1.16
CDH3-209ENST00000569080 ZNF830Q96NB3 372 aaPredicted RBP7.8□□□□□ -1.16
CDH3-209ENST00000569080 CEP41Q9BYV8 373 aa7.8□□□□□ -1.16
CDH3-209ENST00000569080 TRIM5Q9C035 493 aa7.8□□□□□ -1.16
CDH3-209ENST00000569080 RBSNQ9H1K0 784 aa7.8□□□□□ -1.16
CDH3-209ENST00000569080 ABCG8Q9H221 673 aa7.8□□□□□ -1.16
CDH3-209ENST00000569080 PCDH9Q9HC56 1237 aa7.8□□□□□ -1.16
CDH3-209ENST00000569080 CYP4F12Q9HCS2 524 aa7.8□□□□□ -1.16
CDH3-209ENST00000569080 PHPT1Q9NRX4 125 aaPredicted RBP7.8□□□□□ -1.16
CDH3-209ENST00000569080 TRNAU1APQ9NX07 287 aaKnown RBP7.8□□□□□ -1.16
CDH3-209ENST00000569080 KCTD5Q9NXV2 234 aa7.8□□□□□ -1.16
CDH3-209ENST00000569080 CD84Q9UIB8 345 aa7.8□□□□□ -1.16
CDH3-209ENST00000569080 APPL1Q9UKG1 709 aa7.8□□□□□ -1.16
CDH3-209ENST00000569080 SUFUQ9UMX1 484 aa7.8□□□□□ -1.16
CDH3-209ENST00000569080 RPL26L1Q9UNX3 145 aaKnown RBP7.8□□□□□ -1.16
CDH3-209ENST00000569080 GPR34Q9UPC5 381 aa7.8□□□□□ -1.16
CDH3-209ENST00000569080 REXO2Q9Y3B8 237 aaKnown RBP7.8□□□□□ -1.16
CDH3-209ENST00000569080 TTLL3Q9Y4R7 772 aa7.8□□□□□ -1.16
CDH3-209ENST00000569080 HEY1Q9Y5J3 304 aa7.8□□□□□ -1.16
CDH3-209ENST00000569080 PCYT1BQ9Y5K3 369 aaPredicted RBP7.8□□□□□ -1.16
CDH3-209ENST00000569080 CFAP46Q8IYW2 2715 aa7.8□□□□□ -1.16
CDH3-209ENST00000569080 ZNF106Q9H2Y7 1883 aaKnown RBP7.79□□□□□ -1.16
CDH3-209ENST00000569080 hCG_1818297A0A087WSY0 165 aa7.79□□□□□ -1.16
CDH3-209ENST00000569080 A0A0A6YYK5 440 aaPredicted RBP7.79□□□□□ -1.16
CDH3-209ENST00000569080 SOWAHDA6NJG2 315 aa7.79□□□□□ -1.16
CDH3-209ENST00000569080 FADS2P1A8MWK0 482 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms