RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 PAF1Q8N7H5 531 aa12.45□□□□□ -0.42
SNX29-207ENST00000568949 GALNT11Q8NCW6 608 aa12.45□□□□□ -0.42
SNX29-207ENST00000568949 OR10G6Q8NH81 332 aa12.45□□□□□ -0.42
SNX29-207ENST00000568949 EPS8L1Q8TE68 723 aa12.45□□□□□ -0.42
SNX29-207ENST00000568949 SPOCK2Q92563 424 aa12.45□□□□□ -0.42
SNX29-207ENST00000568949 NUS1Q96E22 293 aa12.45□□□□□ -0.42
SNX29-207ENST00000568949 AHCYL2Q96HN2 611 aaKnown RBP12.45□□□□□ -0.42
SNX29-207ENST00000568949 LRRC19Q9H756 370 aa12.45□□□□□ -0.42
SNX29-207ENST00000568949 SUDS3Q9H7L9 328 aaPredicted RBP12.45□□□□□ -0.42
SNX29-207ENST00000568949 PRDM8Q9NQV8 689 aa12.45□□□□□ -0.42
SNX29-207ENST00000568949 SLC17A4Q9Y2C5 497 aa12.45□□□□□ -0.42
SNX29-207ENST00000568949 ST14Q9Y5Y6 855 aa12.45□□□□□ -0.42
SNX29-207ENST00000568949 FHOD1Q9Y613 1164 aa12.45□□□□□ -0.42
SNX29-207ENST00000568949 KCNMB2Q9Y691 235 aa12.45□□□□□ -0.42
SNX29-207ENST00000568949 J3KR12 359 aa12.44□□□□□ -0.42
SNX29-207ENST00000568949 TRAFD1O14545 582 aaPredicted RBP12.44□□□□□ -0.42
SNX29-207ENST00000568949 CREB3O43889 395 aa12.44□□□□□ -0.42
SNX29-207ENST00000568949 VPS4BO75351 444 aa12.44□□□□□ -0.42
SNX29-207ENST00000568949 STK17BO94768 372 aa12.44□□□□□ -0.42
SNX29-207ENST00000568949 CYP1A1P04798 512 aaPredicted RBP12.44□□□□□ -0.42
SNX29-207ENST00000568949 PRKCSHP14314 528 aaPredicted RBP12.44□□□□□ -0.42
SNX29-207ENST00000568949 HTR7P34969 479 aa12.44□□□□□ -0.42
SNX29-207ENST00000568949 AIF1P55008 147 aa12.44□□□□□ -0.42
SNX29-207ENST00000568949 CDK3Q00526 305 aa12.44□□□□□ -0.42
SNX29-207ENST00000568949 NSUN2Q08J23 767 aaKnown RBP eCLIP12.44□□□□□ -0.42
SNX29-207ENST00000568949 KLHDC7AQ5VTJ3 777 aa12.44□□□□□ -0.42
SNX29-207ENST00000568949 CAPRIN2Q6IMN6 1127 aaKnown RBP12.44□□□□□ -0.42
SNX29-207ENST00000568949 C16orf46Q6P387 395 aa12.44□□□□□ -0.42
SNX29-207ENST00000568949 WDR74Q6RFH5 385 aaPredicted RBP12.44□□□□□ -0.42
SNX29-207ENST00000568949 PHLDB2Q86SQ0 1253 aa12.44□□□□□ -0.42
SNX29-207ENST00000568949 CCDC13Q8IYE1 715 aa12.44□□□□□ -0.42
SNX29-207ENST00000568949 ESX1Q8N693 406 aa12.44□□□□□ -0.42
SNX29-207ENST00000568949 TSEN2Q8NCE0 465 aaKnown RBP12.44□□□□□ -0.42
SNX29-207ENST00000568949 SCARF2Q96GP6 870 aaPredicted RBP12.44□□□□□ -0.42
SNX29-207ENST00000568949 SLC38A3Q99624 504 aa12.44□□□□□ -0.42
SNX29-207ENST00000568949 NAA15Q9BXJ9 866 aaKnown RBP12.44□□□□□ -0.42
SNX29-207ENST00000568949 ZMYND15Q9H091 742 aa12.44□□□□□ -0.42
SNX29-207ENST00000568949 NDST4Q9H3R1 872 aa12.44□□□□□ -0.42
SNX29-207ENST00000568949 VPS4AQ9UN37 437 aa12.44□□□□□ -0.42
SNX29-207ENST00000568949 TEP1Q99973 2627 aaKnown RBP12.43□□□□□ -0.42
SNX29-207ENST00000568949 ITPR2Q14571 2701 aa12.43□□□□□ -0.42
SNX29-207ENST00000568949 A0A1W2PQ67 120 aa12.43□□□□□ -0.42
SNX29-207ENST00000568949 PALMO75781 387 aa12.43□□□□□ -0.42
SNX29-207ENST00000568949 DLGAP3O95886 979 aa12.43□□□□□ -0.42
SNX29-207ENST00000568949 ATXN8OSP0DMR3 200 aa12.43□□□□□ -0.42
SNX29-207ENST00000568949 KRT3P12035 628 aa12.43□□□□□ -0.42
SNX29-207ENST00000568949 NR1D1P20393 614 aa12.43□□□□□ -0.42
SNX29-207ENST00000568949 GPD1P21695 349 aa12.43□□□□□ -0.42
SNX29-207ENST00000568949 RFC1P35251 1148 aaPredicted RBP12.43□□□□□ -0.42
SNX29-207ENST00000568949 ACTR1BP42025 376 aa12.43□□□□□ -0.42
SNX29-207ENST00000568949 STAT5AP42229 794 aa12.43□□□□□ -0.42
SNX29-207ENST00000568949 NOP2P46087 812 aaKnown RBP12.43□□□□□ -0.42
SNX29-207ENST00000568949 GSCP56915 257 aaPredicted RBP12.43□□□□□ -0.42
SNX29-207ENST00000568949 ACTR1AP61163 376 aa12.43□□□□□ -0.42
SNX29-207ENST00000568949 ATP1A1-AS1Q5TC04 95 aa12.43□□□□□ -0.42
SNX29-207ENST00000568949 ASB18Q6ZVZ8 466 aa12.43□□□□□ -0.42
SNX29-207ENST00000568949 CBARPQ8N350 705 aaPredicted RBP12.43□□□□□ -0.42
SNX29-207ENST00000568949 SSC4DQ8WTU2 575 aa12.43□□□□□ -0.42
SNX29-207ENST00000568949 PTCD2Q8WV60 388 aaKnown RBP12.43□□□□□ -0.42
SNX29-207ENST00000568949 CTRCQ99895 268 aa12.43□□□□□ -0.42
SNX29-207ENST00000568949 C11orf70Q9BRQ4 267 aa12.43□□□□□ -0.42
SNX29-207ENST00000568949 CINPQ9BW66 212 aaPredicted RBP12.43□□□□□ -0.42
SNX29-207ENST00000568949 STK33Q9BYT3 514 aa12.43□□□□□ -0.42
SNX29-207ENST00000568949 IGSF5Q9NSI5 407 aa12.43□□□□□ -0.42
SNX29-207ENST00000568949 B4GALT6Q9UBX8 382 aa12.43□□□□□ -0.42
SNX29-207ENST00000568949 DACH1Q9UI36 760 aa12.43□□□□□ -0.42
SNX29-207ENST00000568949 NOCTQ9UK39 431 aaKnown RBP12.43□□□□□ -0.42
SNX29-207ENST00000568949 FZD10Q9ULW2 581 aa12.43□□□□□ -0.42
SNX29-207ENST00000568949 PCDHB3Q9Y5E6 796 aa12.43□□□□□ -0.42
SNX29-207ENST00000568949 RPS6KL1Q9Y6S9 549 aa12.43□□□□□ -0.42
SNX29-207ENST00000568949 ARHGAP42A6NI28 874 aa12.42□□□□□ -0.42
SNX29-207ENST00000568949 A8MU76 341 aa12.42□□□□□ -0.42
SNX29-207ENST00000568949 A8MX80 341 aa12.42□□□□□ -0.42
SNX29-207ENST00000568949 F8VZ95 297 aa12.42□□□□□ -0.42
SNX29-207ENST00000568949 K7EM74 188 aa12.42□□□□□ -0.42
SNX29-207ENST00000568949 HEXIM1O94992 359 aaKnown RBP12.42□□□□□ -0.42
SNX29-207ENST00000568949 UCHL3P15374 230 aa12.42□□□□□ -0.42
SNX29-207ENST00000568949 GNLYP22749 145 aa12.42□□□□□ -0.42
SNX29-207ENST00000568949 VIPR1P32241 457 aa12.42□□□□□ -0.42
SNX29-207ENST00000568949 UQCRFS1P47985 274 aa12.42□□□□□ -0.42
SNX29-207ENST00000568949 PAPOLAP51003 745 aaKnown RBP12.42□□□□□ -0.42
SNX29-207ENST00000568949 AP1S1P61966 158 aa12.42□□□□□ -0.42
SNX29-207ENST00000568949 CDR2Q01850 454 aa12.42□□□□□ -0.42
SNX29-207ENST00000568949 PTP4A2Q12974 167 aa12.42□□□□□ -0.42
SNX29-207ENST00000568949 RFTN1Q14699 578 aaPredicted RBP12.42□□□□□ -0.42
SNX29-207ENST00000568949 CNGA3Q16281 694 aa12.42□□□□□ -0.42
SNX29-207ENST00000568949 VWA3BQ502W6 1294 aa12.42□□□□□ -0.42
SNX29-207ENST00000568949 SNAP47Q5SQN1 464 aa12.42□□□□□ -0.42
SNX29-207ENST00000568949 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.42□□□□□ -0.42
SNX29-207ENST00000568949 SCYL2Q6P3W7 929 aa12.42□□□□□ -0.42
SNX29-207ENST00000568949 WDR59Q6PJI9 974 aa12.42□□□□□ -0.42
SNX29-207ENST00000568949 TRIM72Q6ZMU5 477 aa12.42□□□□□ -0.42
SNX29-207ENST00000568949 FAM114A1Q8IWE2 563 aa12.42□□□□□ -0.42
SNX29-207ENST00000568949 SFRP1Q8N474 314 aa12.42□□□□□ -0.42
SNX29-207ENST00000568949 EFCAB3Q8N7B9 438 aa12.42□□□□□ -0.42
SNX29-207ENST00000568949 SLC30A5Q8TAD4 765 aa12.42□□□□□ -0.42
SNX29-207ENST00000568949 SLC37A2Q8TED4 501 aa12.42□□□□□ -0.42
SNX29-207ENST00000568949 SLC20A1Q8WUM9 679 aa12.42□□□□□ -0.42
SNX29-207ENST00000568949 DTD2Q96FN9 168 aa12.42□□□□□ -0.42
SNX29-207ENST00000568949 OR2M4Q96R27 311 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms