RNA–Protein interactions for RNA: ENST00000568591.5

PKD1-235, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 2

Gene PKD1, Length 2,545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-235ENST00000568591 CAPN15O75808 1086 aa18.32■□□□□ 0.52
PKD1-235ENST00000568591 BMP2P12643 396 aa18.32■□□□□ 0.52
PKD1-235ENST00000568591 NCK1P16333 377 aa18.32■□□□□ 0.52
PKD1-235ENST00000568591 DIO3P55073 304 aa18.32■□□□□ 0.52
PKD1-235ENST00000568591 STX1BP61266 288 aa18.32■□□□□ 0.52
PKD1-235ENST00000568591 HERVK_113P63132 956 aa18.32■□□□□ 0.52
PKD1-235ENST00000568591 CIR1Q86X95 450 aaPredicted RBP18.32■□□□□ 0.52
PKD1-235ENST00000568591 OFCC1Q8IZS5 231 aa18.32■□□□□ 0.52
PKD1-235ENST00000568591 PGBD5Q8N414 524 aa18.32■□□□□ 0.52
PKD1-235ENST00000568591 TRPC4APQ8TEL6 797 aa18.32■□□□□ 0.52
PKD1-235ENST00000568591 TWIST2Q8WVJ9 160 aa18.32■□□□□ 0.52
PKD1-235ENST00000568591 VPS33AQ96AX1 596 aa18.32■□□□□ 0.52
PKD1-235ENST00000568591 TEX37Q96LM6 180 aa18.32■□□□□ 0.52
PKD1-235ENST00000568591 ERVK-6Q9BXR3 956 aa18.32■□□□□ 0.52
PKD1-235ENST00000568591 ATP13A1Q9HD20 1204 aa18.32■□□□□ 0.52
PKD1-235ENST00000568591 MRPL40Q9NQ50 206 aaKnown RBP18.32■□□□□ 0.52
PKD1-235ENST00000568591 MYADML2A6NDP7 307 aa18.31■□□□□ 0.52
PKD1-235ENST00000568591 ZNF865P0CJ78 1059 aaPredicted RBP18.31■□□□□ 0.52
PKD1-235ENST00000568591 MTHFD2P13995 350 aa18.31■□□□□ 0.52
PKD1-235ENST00000568591 CD1DP15813 335 aa18.31■□□□□ 0.52
PKD1-235ENST00000568591 CDK9P50750 372 aaKnown RBP18.31■□□□□ 0.52
PKD1-235ENST00000568591 RABL3Q5HYI8 236 aa18.31■□□□□ 0.52
PKD1-235ENST00000568591 PHYKPLQ8IUZ5 450 aa18.31■□□□□ 0.52
PKD1-235ENST00000568591 SLC22A9Q8IVM8 553 aa18.31■□□□□ 0.52
PKD1-235ENST00000568591 CMTR2Q8IYT2 770 aaKnown RBP18.31■□□□□ 0.52
PKD1-235ENST00000568591 L3HYPDHQ96EM0 354 aa18.31■□□□□ 0.52
PKD1-235ENST00000568591 TCF12Q99081 682 aa18.31■□□□□ 0.52
PKD1-235ENST00000568591 DCUN1D5Q9BTE7 237 aa18.31■□□□□ 0.52
PKD1-235ENST00000568591 UPF3AQ9H1J1 476 aaKnown RBP18.31■□□□□ 0.52
PKD1-235ENST00000568591 UXTQ9UBK9 157 aaPredicted RBP18.31■□□□□ 0.52
PKD1-235ENST00000568591 IKZF3Q9UKT9 509 aa18.31■□□□□ 0.52
PKD1-235ENST00000568591 OAZ3Q9UMX2 235 aa18.31■□□□□ 0.52
PKD1-235ENST00000568591 CDC14AQ9UNH5 594 aa18.31■□□□□ 0.52
PKD1-235ENST00000568591 V9GYQ6 96 aa18.31■□□□□ 0.52
PKD1-235ENST00000568591 DHRS12A0PJE2 317 aa18.31■□□□□ 0.52
PKD1-235ENST00000568591 FAM163BP0C2L3 166 aa18.31■□□□□ 0.52
PKD1-235ENST00000568591 GRIK1P39086 918 aa18.31■□□□□ 0.52
PKD1-235ENST00000568591 GPR15P49685 360 aa18.31■□□□□ 0.52
PKD1-235ENST00000568591 TIGD7Q6NT04 549 aaPredicted RBP18.31■□□□□ 0.52
PKD1-235ENST00000568591 PTPN18Q99952 460 aa18.31■□□□□ 0.52
PKD1-235ENST00000568591 SMOC2Q9H3U7 446 aa18.31■□□□□ 0.52
PKD1-235ENST00000568591 AGO3Q9H9G7 860 aaKnown RBP18.31■□□□□ 0.52
PKD1-235ENST00000568591 CLK4Q9HAZ1 481 aaKnown RBP18.31■□□□□ 0.52
PKD1-235ENST00000568591 VPS45Q9NRW7 570 aa18.31■□□□□ 0.52
PKD1-235ENST00000568591 CCM2LQ9NUG4 571 aaPredicted RBP18.31■□□□□ 0.52
PKD1-235ENST00000568591 MIA3Q5JRA6 1907 aa18.31■□□□□ 0.52
PKD1-235ENST00000568591 FAM155AB1AL88 458 aaPredicted RBP18.3■□□□□ 0.52
PKD1-235ENST00000568591 LDB2O43679 373 aa18.3■□□□□ 0.52
PKD1-235ENST00000568591 SLC6A2P23975 617 aa18.3■□□□□ 0.52
PKD1-235ENST00000568591 ACADVLP49748 655 aa18.3■□□□□ 0.52
PKD1-235ENST00000568591 LPIN1Q14693 890 aa18.3■□□□□ 0.52
PKD1-235ENST00000568591 BRMS1LQ5PSV4 323 aa18.3■□□□□ 0.52
PKD1-235ENST00000568591 SCIMPQ6UWF3 145 aa18.3■□□□□ 0.52
PKD1-235ENST00000568591 CHST15Q7LFX5 561 aaPredicted RBP18.3■□□□□ 0.52
PKD1-235ENST00000568591 CLVS1Q8IUQ0 354 aaPredicted RBP18.3■□□□□ 0.52
PKD1-235ENST00000568591 CLYBLQ8N0X4 340 aa18.3■□□□□ 0.52
PKD1-235ENST00000568591 LZTR1Q8N653 840 aa18.3■□□□□ 0.52
PKD1-235ENST00000568591 DNAJB14Q8TBM8 379 aa18.3■□□□□ 0.52
PKD1-235ENST00000568591 CALML6Q8TD86 181 aa18.3■□□□□ 0.52
PKD1-235ENST00000568591 TSPAN17Q96FV3 270 aa18.3■□□□□ 0.52
PKD1-235ENST00000568591 ACBD6Q9BR61 282 aa18.3■□□□□ 0.52
PKD1-235ENST00000568591 EFHD1Q9BUP0 239 aa18.3■□□□□ 0.52
PKD1-235ENST00000568591 PIF1Q9H611 641 aa18.3■□□□□ 0.52
PKD1-235ENST00000568591 ARNT2Q9HBZ2 717 aa18.3■□□□□ 0.52
PKD1-235ENST00000568591 TIMMDC1Q9NPL8 285 aa18.3■□□□□ 0.52
PKD1-235ENST00000568591 ARMC1Q9NVT9 282 aa18.3■□□□□ 0.52
PKD1-235ENST00000568591 SLAMF8Q9P0V8 285 aa18.3■□□□□ 0.52
PKD1-235ENST00000568591 TIMM22Q9Y584 194 aa18.3■□□□□ 0.52
PKD1-235ENST00000568591 ANKRD12Q6UB98 2062 aa18.3■□□□□ 0.52
PKD1-235ENST00000568591 DICER1Q9UPY3 1922 aaKnown RBP18.3■□□□□ 0.52
PKD1-235ENST00000568591 MROH6A6NGR9 719 aa18.3■□□□□ 0.52
PKD1-235ENST00000568591 PFDN1O60925 122 aa18.3■□□□□ 0.52
PKD1-235ENST00000568591 CYP2C18P33260 490 aa18.3■□□□□ 0.52
PKD1-235ENST00000568591 GALNT1Q10472 559 aaPredicted RBP18.3■□□□□ 0.52
PKD1-235ENST00000568591 TMED1Q13445 227 aa18.3■□□□□ 0.52
PKD1-235ENST00000568591 DCTN2Q13561 401 aaKnown RBP18.3■□□□□ 0.52
PKD1-235ENST00000568591 SCN4BQ8IWT1 228 aa18.3■□□□□ 0.52
PKD1-235ENST00000568591 OR13C4Q8NGS5 318 aa18.3■□□□□ 0.52
PKD1-235ENST00000568591 ABTB1Q969K4 478 aaPredicted RBP18.3■□□□□ 0.52
PKD1-235ENST00000568591 TUBGCP3Q96CW5 907 aa18.3■□□□□ 0.52
PKD1-235ENST00000568591 ABCC13Q9NSE7 274 aa18.3■□□□□ 0.52
PKD1-235ENST00000568591 CPA4Q9UI42 421 aa18.3■□□□□ 0.52
PKD1-235ENST00000568591 COL4A4P53420 1690 aaPredicted RBP18.3■□□□□ 0.52
PKD1-235ENST00000568591 ATXN1LP0C7T5 689 aaKnown RBP18.29■□□□□ 0.52
PKD1-235ENST00000568591 ODC1P11926 461 aa18.29■□□□□ 0.52
PKD1-235ENST00000568591 HGFP14210 728 aa18.29■□□□□ 0.52
PKD1-235ENST00000568591 PRDX3P30048 256 aaKnown RBP18.29■□□□□ 0.52
PKD1-235ENST00000568591 ADARP55265 1226 aaKnown RBP18.29■□□□□ 0.52
PKD1-235ENST00000568591 GALNT3Q14435 633 aa18.29■□□□□ 0.52
PKD1-235ENST00000568591 ADRM1Q16186 407 aa18.29■□□□□ 0.52
PKD1-235ENST00000568591 DUS1LQ6P1R4 473 aaKnown RBP18.29■□□□□ 0.52
PKD1-235ENST00000568591 HACD2Q6Y1H2 254 aa18.29■□□□□ 0.52
PKD1-235ENST00000568591 ERI1Q8IV48 349 aaKnown RBP18.29■□□□□ 0.52
PKD1-235ENST00000568591 BLOC1S5Q8TDH9 187 aa18.29■□□□□ 0.52
PKD1-235ENST00000568591 GPR152Q8TDT2 470 aa18.29■□□□□ 0.52
PKD1-235ENST00000568591 ADI1Q9BV57 179 aa18.29■□□□□ 0.52
PKD1-235ENST00000568591 SEMA4BQ9NPR2 832 aaPredicted RBP18.29■□□□□ 0.52
PKD1-235ENST00000568591 AGPAT4Q9NRZ5 378 aa18.29■□□□□ 0.52
PKD1-235ENST00000568591 POLG2Q9UHN1 485 aa18.29■□□□□ 0.52
PKD1-235ENST00000568591 ACTL7AQ9Y615 435 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms