RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 TMEM215Q68D42 235 aa7.06□□□□□ -1.28
SMG1-215ENST00000568239 LRRC8EQ6NSJ5 796 aa7.06□□□□□ -1.28
SMG1-215ENST00000568239 ZNF557Q8N988 423 aaPredicted RBP7.06□□□□□ -1.28
SMG1-215ENST00000568239 CHST14Q8NCH0 376 aa7.06□□□□□ -1.28
SMG1-215ENST00000568239 PPP4R1Q8TF05 950 aa7.06□□□□□ -1.28
SMG1-215ENST00000568239 HEXDCQ8WVB3 486 aa7.06□□□□□ -1.28
SMG1-215ENST00000568239 SCG3Q8WXD2 468 aaKnown RBP7.06□□□□□ -1.28
SMG1-215ENST00000568239 SMARCD2Q92925 531 aa7.06□□□□□ -1.28
SMG1-215ENST00000568239 ERLEC1Q96DZ1 483 aa7.06□□□□□ -1.28
SMG1-215ENST00000568239 LMLNQ96KR4 655 aa7.06□□□□□ -1.28
SMG1-215ENST00000568239 ASB16Q96NS5 453 aa7.06□□□□□ -1.28
SMG1-215ENST00000568239 PLCD4Q9BRC7 762 aa7.06□□□□□ -1.28
SMG1-215ENST00000568239 MAGEE1Q9HCI5 957 aa7.06□□□□□ -1.28
SMG1-215ENST00000568239 THAP1Q9NVV9 213 aa7.06□□□□□ -1.28
SMG1-215ENST00000568239 MTF2Q9Y483 593 aaPredicted RBP7.06□□□□□ -1.28
SMG1-215ENST00000568239 USH1CQ9Y6N9 552 aa7.06□□□□□ -1.28
SMG1-215ENST00000568239 PRUNE2Q8WUY3 3088 aa7.06□□□□□ -1.28
SMG1-215ENST00000568239 ATG2BQ96BY7 2078 aa7.05□□□□□ -1.28
SMG1-215ENST00000568239 A0A087X1B8 175 aa7.05□□□□□ -1.28
SMG1-215ENST00000568239 A0A0J9YYE9 177 aa7.05□□□□□ -1.28
SMG1-215ENST00000568239 HEPACAM2A8MVW5 462 aa7.05□□□□□ -1.28
SMG1-215ENST00000568239 TTC34A8MYJ7 566 aa7.05□□□□□ -1.28
SMG1-215ENST00000568239 OR1I1O60431 355 aa7.05□□□□□ -1.28
SMG1-215ENST00000568239 RHOBTB1O94844 696 aa7.05□□□□□ -1.28
SMG1-215ENST00000568239 KLHL2O95198 593 aa7.05□□□□□ -1.28
SMG1-215ENST00000568239 TRBC1P01850 177 aa7.05□□□□□ -1.28
SMG1-215ENST00000568239 HMGCLP35914 325 aa7.05□□□□□ -1.28
SMG1-215ENST00000568239 POLD2P49005 469 aa7.05□□□□□ -1.28
SMG1-215ENST00000568239 LIG3P49916 1009 aa7.05□□□□□ -1.28
SMG1-215ENST00000568239 SPRED3Q2MJR0 410 aa7.05□□□□□ -1.28
SMG1-215ENST00000568239 EML3Q32P44 896 aa7.05□□□□□ -1.28
SMG1-215ENST00000568239 AGAP9Q5VTM2 703 aa7.05□□□□□ -1.28
SMG1-215ENST00000568239 FAM45BPQ6NSW5 357 aa7.05□□□□□ -1.28
SMG1-215ENST00000568239 KLC3Q6P597 504 aa7.05□□□□□ -1.28
SMG1-215ENST00000568239 C12orf40Q86WS4 652 aa7.05□□□□□ -1.28
SMG1-215ENST00000568239 ZSWIM9Q86XI8 627 aa7.05□□□□□ -1.28
SMG1-215ENST00000568239 PIANPQ8IYJ0 282 aa7.05□□□□□ -1.28
SMG1-215ENST00000568239 FITM2Q8N6M3 262 aa7.05□□□□□ -1.28
SMG1-215ENST00000568239 FAM45AQ8TCE6 357 aa7.05□□□□□ -1.28
SMG1-215ENST00000568239 NAT14Q8WUY8 206 aa7.05□□□□□ -1.28
SMG1-215ENST00000568239 CCT6BQ92526 530 aa7.05□□□□□ -1.28
SMG1-215ENST00000568239 EXT2Q93063 718 aa7.05□□□□□ -1.28
SMG1-215ENST00000568239 EID2BQ96D98 161 aa7.05□□□□□ -1.28
SMG1-215ENST00000568239 ERP27Q96DN0 273 aa7.05□□□□□ -1.28
SMG1-215ENST00000568239 LRRC37BQ96QE4 947 aa7.05□□□□□ -1.28
SMG1-215ENST00000568239 C1QTNF1Q9BXJ1 281 aa7.05□□□□□ -1.28
SMG1-215ENST00000568239 SUV39H2Q9H5I1 410 aa7.05□□□□□ -1.28
SMG1-215ENST00000568239 SARS2Q9NP81 518 aaKnown RBP7.05□□□□□ -1.28
SMG1-215ENST00000568239 SLC8A2Q9UPR5 921 aa7.05□□□□□ -1.28
SMG1-215ENST00000568239 ERVW-1Q9UQF0 538 aa7.05□□□□□ -1.28
SMG1-215ENST00000568239 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.05□□□□□ -1.28
SMG1-215ENST00000568239 G3V2L1 256 aa7.05□□□□□ -1.28
SMG1-215ENST00000568239 PFDN6O15212 129 aa7.05□□□□□ -1.28
SMG1-215ENST00000568239 HTRA2O43464 458 aaPredicted RBP7.05□□□□□ -1.28
SMG1-215ENST00000568239 TRIM13O60858 407 aa7.05□□□□□ -1.28
SMG1-215ENST00000568239 SOCS5O75159 536 aa7.05□□□□□ -1.28
SMG1-215ENST00000568239 TULP3O75386 442 aa7.05□□□□□ -1.28
SMG1-215ENST00000568239 UBOX5O94941 541 aa7.05□□□□□ -1.28
SMG1-215ENST00000568239 PRAMEF1O95521 474 aa7.05□□□□□ -1.28
SMG1-215ENST00000568239 POP4O95707 220 aaKnown RBP7.05□□□□□ -1.28
SMG1-215ENST00000568239 HSPA4LO95757 839 aa7.05□□□□□ -1.28
SMG1-215ENST00000568239 SERPINE1P05121 402 aa7.05□□□□□ -1.28
SMG1-215ENST00000568239 APOA4P06727 396 aa7.05□□□□□ -1.28
SMG1-215ENST00000568239 CHRM3P20309 590 aa7.05□□□□□ -1.28
SMG1-215ENST00000568239 OGNP20774 298 aaKnown RBP7.05□□□□□ -1.28
SMG1-215ENST00000568239 OCRLQ01968 901 aa7.05□□□□□ -1.28
SMG1-215ENST00000568239 PEX6Q13608 980 aa7.05□□□□□ -1.28
SMG1-215ENST00000568239 PTPRNQ16849 979 aa7.05□□□□□ -1.28
SMG1-215ENST00000568239 ZNF549Q6P9A3 640 aa7.05□□□□□ -1.28
SMG1-215ENST00000568239 TSPAN33Q86UF1 283 aa7.05□□□□□ -1.28
SMG1-215ENST00000568239 TTC30BQ8N4P2 665 aa7.05□□□□□ -1.28
SMG1-215ENST00000568239 PCDH20Q8N6Y1 951 aaKnown RBP7.05□□□□□ -1.28
SMG1-215ENST00000568239 CCNYL1Q8N7R7 359 aa7.05□□□□□ -1.28
SMG1-215ENST00000568239 GPR150Q8NGU9 434 aa7.05□□□□□ -1.28
SMG1-215ENST00000568239 ANKRD49Q8WVL7 239 aa7.05□□□□□ -1.28
SMG1-215ENST00000568239 C10orf82Q8WW14 230 aa7.05□□□□□ -1.28
SMG1-215ENST00000568239 C7orf26Q96N11 449 aa7.05□□□□□ -1.28
SMG1-215ENST00000568239 KLHL32Q96NJ5 620 aa7.05□□□□□ -1.28
SMG1-215ENST00000568239 TMEM120AQ9BXJ8 343 aa7.05□□□□□ -1.28
SMG1-215ENST00000568239 SHCBP1LQ9BZQ2 653 aa7.05□□□□□ -1.28
SMG1-215ENST00000568239 LMAN2LQ9H0V9 348 aa7.05□□□□□ -1.28
SMG1-215ENST00000568239 CYP4F12Q9HCS2 524 aa7.05□□□□□ -1.28
SMG1-215ENST00000568239 IL17CQ9P0M4 197 aa7.05□□□□□ -1.28
SMG1-215ENST00000568239 MID2Q9UJV3 735 aa7.05□□□□□ -1.28
SMG1-215ENST00000568239 RIMKLBQ9ULI2 386 aa7.05□□□□□ -1.28
SMG1-215ENST00000568239 PLA2G4CQ9UP65 541 aa7.05□□□□□ -1.28
SMG1-215ENST00000568239 DNAJC16Q9Y2G8 782 aa7.05□□□□□ -1.28
SMG1-215ENST00000568239 NEMP2A6NFY4 417 aa7.05□□□□□ -1.28
SMG1-215ENST00000568239 OTOL1A6NHN0 477 aaPredicted RBP7.05□□□□□ -1.28
SMG1-215ENST00000568239 NPIPB15A6NHN6 443 aaPredicted RBP7.05□□□□□ -1.28
SMG1-215ENST00000568239 E5RI56 91 aa7.05□□□□□ -1.28
SMG1-215ENST00000568239 H0YHG0 523 aa7.05□□□□□ -1.28
SMG1-215ENST00000568239 ATP5BP06576 529 aaKnown RBP7.05□□□□□ -1.28
SMG1-215ENST00000568239 LTA4HP09960 611 aaKnown RBP7.05□□□□□ -1.28
SMG1-215ENST00000568239 COL6A2P12110 1019 aa7.05□□□□□ -1.28
SMG1-215ENST00000568239 GRK2P25098 689 aa7.05□□□□□ -1.28
SMG1-215ENST00000568239 SLC6A11P48066 632 aa7.05□□□□□ -1.28
SMG1-215ENST00000568239 CSNK1DP48730 415 aa7.05□□□□□ -1.28
SMG1-215ENST00000568239 TTPAP49638 278 aa7.05□□□□□ -1.28
SMG1-215ENST00000568239 KPNA2P52292 529 aaKnown RBP7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms