RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 DPTQ07507 201 aa18.59■□□□□ 0.57
LINC01238-205ENST00000567549 ITKQ08881 620 aa18.59■□□□□ 0.57
LINC01238-205ENST00000567549 NR1I3Q14994 352 aa18.59■□□□□ 0.57
LINC01238-205ENST00000567549 ZNF843Q8N446 348 aa18.59■□□□□ 0.57
LINC01238-205ENST00000567549 ZDHHC1Q8WTX9 485 aa18.59■□□□□ 0.57
LINC01238-205ENST00000567549 MCCC1Q96RQ3 725 aaPredicted RBP18.59■□□□□ 0.57
LINC01238-205ENST00000567549 NUP85Q9BW27 656 aa18.59■□□□□ 0.57
LINC01238-205ENST00000567549 FOXP3Q9BZS1 431 aa18.59■□□□□ 0.57
LINC01238-205ENST00000567549 NOD2Q9HC29 1040 aa18.59■□□□□ 0.57
LINC01238-205ENST00000567549 PCDH18Q9HCL0 1135 aa18.59■□□□□ 0.57
LINC01238-205ENST00000567549 MRPL40Q9NQ50 206 aaKnown RBP18.59■□□□□ 0.57
LINC01238-205ENST00000567549 PISDQ9UG56 409 aa18.59■□□□□ 0.57
LINC01238-205ENST00000567549 RABGEF1Q9UJ41 708 aa18.59■□□□□ 0.57
LINC01238-205ENST00000567549 PPIL1Q9Y3C6 166 aa18.59■□□□□ 0.57
LINC01238-205ENST00000567549 A0A1W2PNU3 283 aaPredicted RBP18.58■□□□□ 0.56
LINC01238-205ENST00000567549 HGSO14964 777 aaPredicted RBP18.58■□□□□ 0.56
LINC01238-205ENST00000567549 IVLP07476 585 aa18.58■□□□□ 0.56
LINC01238-205ENST00000567549 MX2P20592 715 aa18.58■□□□□ 0.56
LINC01238-205ENST00000567549 GPR1P46091 355 aa18.58■□□□□ 0.56
LINC01238-205ENST00000567549 CDK3Q00526 305 aa18.58■□□□□ 0.56
LINC01238-205ENST00000567549 ZFP36L1Q07352 338 aaKnown RBP18.58■□□□□ 0.56
LINC01238-205ENST00000567549 CLN3Q13286 438 aa18.58■□□□□ 0.56
LINC01238-205ENST00000567549 LRP8Q14114 963 aa18.58■□□□□ 0.56
LINC01238-205ENST00000567549 PDK2Q15119 407 aa18.58■□□□□ 0.56
LINC01238-205ENST00000567549 PHF19Q5T6S3 580 aa18.58■□□□□ 0.56
LINC01238-205ENST00000567549 ZNF765Q7L2R6 523 aa18.58■□□□□ 0.56
LINC01238-205ENST00000567549 B3GNT8Q7Z7M8 397 aa18.58■□□□□ 0.56
LINC01238-205ENST00000567549 NLRP8Q86W28 1048 aa18.58■□□□□ 0.56
LINC01238-205ENST00000567549 ZNF830Q96NB3 372 aaPredicted RBP18.58■□□□□ 0.56
LINC01238-205ENST00000567549 LGR4Q9BXB1 951 aa18.58■□□□□ 0.56
LINC01238-205ENST00000567549 STN1Q9H668 368 aaKnown RBP18.58■□□□□ 0.56
LINC01238-205ENST00000567549 LUC7L2Q9Y383 392 aaKnown RBP18.58■□□□□ 0.56
LINC01238-205ENST00000567549 RNF215Q9Y6U7 377 aa18.58■□□□□ 0.56
LINC01238-205ENST00000567549 SFTPCP11686 197 aa18.57■□□□□ 0.56
LINC01238-205ENST00000567549 IL1R2P27930 398 aa18.57■□□□□ 0.56
LINC01238-205ENST00000567549 ETV3P41162 512 aa18.57■□□□□ 0.56
LINC01238-205ENST00000567549 GNPDA1P46926 289 aa18.57■□□□□ 0.56
LINC01238-205ENST00000567549 UBASH3AP57075 661 aa18.57■□□□□ 0.56
LINC01238-205ENST00000567549 RPL26P61254 145 aaKnown RBP18.57■□□□□ 0.56
LINC01238-205ENST00000567549 TRA2AQ13595 282 aaKnown RBP eCLIP18.57■□□□□ 0.56
LINC01238-205ENST00000567549 IFI16Q16666 785 aaKnown RBP18.57■□□□□ 0.56
LINC01238-205ENST00000567549 USP53Q70EK8 1073 aa18.57■□□□□ 0.56
LINC01238-205ENST00000567549 FATE1Q969F0 183 aa18.57■□□□□ 0.56
LINC01238-205ENST00000567549 MED8Q96G25 268 aa18.57■□□□□ 0.56
LINC01238-205ENST00000567549 NAP1L5Q96NT1 182 aaPredicted RBP18.57■□□□□ 0.56
LINC01238-205ENST00000567549 FRMD8Q9BZ67 464 aaPredicted RBP18.57■□□□□ 0.56
LINC01238-205ENST00000567549 THAP2Q9H0W7 228 aa18.57■□□□□ 0.56
LINC01238-205ENST00000567549 NT5MQ9NPB1 228 aa18.57■□□□□ 0.56
LINC01238-205ENST00000567549 RPL26L1Q9UNX3 145 aaKnown RBP18.57■□□□□ 0.56
LINC01238-205ENST00000567549 ARHGEF17Q96PE2 2063 aaPredicted RBP18.57■□□□□ 0.56
LINC01238-205ENST00000567549 COL6A6A6NMZ7 2263 aa18.56■□□□□ 0.56
LINC01238-205ENST00000567549 GOLGA6L3A6NEY3 463 aa18.56■□□□□ 0.56
LINC01238-205ENST00000567549 C1QL1O75973 258 aa18.56■□□□□ 0.56
LINC01238-205ENST00000567549 PEX11BO96011 259 aa18.56■□□□□ 0.56
LINC01238-205ENST00000567549 CYP1A2P05177 515 aa18.56■□□□□ 0.56
LINC01238-205ENST00000567549 CEACAM5P06731 702 aa18.56■□□□□ 0.56
LINC01238-205ENST00000567549 KRT7P08729 469 aa18.56■□□□□ 0.56
LINC01238-205ENST00000567549 GARSP41250 739 aaKnown RBP18.56■□□□□ 0.56
LINC01238-205ENST00000567549 TRAF2Q12933 501 aa18.56■□□□□ 0.56
LINC01238-205ENST00000567549 E4F1Q66K89 784 aaPredicted RBP18.56■□□□□ 0.56
LINC01238-205ENST00000567549 ALKBH5Q6P6C2 394 aaKnown RBP18.56■□□□□ 0.56
LINC01238-205ENST00000567549 ADAMTSL4Q6UY14 1074 aa18.56■□□□□ 0.56
LINC01238-205ENST00000567549 Q6ZVL8 140 aa18.56■□□□□ 0.56
LINC01238-205ENST00000567549 ZNF438Q7Z4V0 828 aa18.56■□□□□ 0.56
LINC01238-205ENST00000567549 NRSN1Q8IZ57 195 aa18.56■□□□□ 0.56
LINC01238-205ENST00000567549 TEX26Q8N6G2 289 aa18.56■□□□□ 0.56
LINC01238-205ENST00000567549 KCTD6Q8NC69 237 aa18.56■□□□□ 0.56
LINC01238-205ENST00000567549 AP2M1Q96CW1 435 aa18.56■□□□□ 0.56
LINC01238-205ENST00000567549 OR2M4Q96R27 311 aa18.56■□□□□ 0.56
LINC01238-205ENST00000567549 SEMA3CQ99985 751 aa18.56■□□□□ 0.56
LINC01238-205ENST00000567549 ARHGAP9Q9BRR9 750 aa18.56■□□□□ 0.56
LINC01238-205ENST00000567549 ZNF670Q9BS34 389 aa18.56■□□□□ 0.56
LINC01238-205ENST00000567549 ZMYND15Q9H091 742 aa18.56■□□□□ 0.56
LINC01238-205ENST00000567549 TAAR2Q9P1P5 351 aa18.56■□□□□ 0.56
LINC01238-205ENST00000567549 UVRAGQ9P2Y5 699 aa18.56■□□□□ 0.56
LINC01238-205ENST00000567549 SUFUQ9UMX1 484 aa18.56■□□□□ 0.56
LINC01238-205ENST00000567549 SLC17A4Q9Y2C5 497 aa18.56■□□□□ 0.56
LINC01238-205ENST00000567549 NPIPB15A6NHN6 443 aaPredicted RBP18.55■□□□□ 0.56
LINC01238-205ENST00000567549 ITGB2P05107 769 aa18.55■□□□□ 0.56
LINC01238-205ENST00000567549 SLC2A4P14672 509 aa18.55■□□□□ 0.56
LINC01238-205ENST00000567549 GM2AP17900 193 aa18.55■□□□□ 0.56
LINC01238-205ENST00000567549 CCNCP24863 283 aa18.55■□□□□ 0.56
LINC01238-205ENST00000567549 ALDH4A1P30038 563 aa18.55■□□□□ 0.56
LINC01238-205ENST00000567549 MAN1A1P33908 653 aa18.55■□□□□ 0.56
LINC01238-205ENST00000567549 MAXP61244 160 aa18.55■□□□□ 0.56
LINC01238-205ENST00000567549 FANCCQ00597 558 aa18.55■□□□□ 0.56
LINC01238-205ENST00000567549 SLC25A11Q02978 314 aaKnown RBP18.55■□□□□ 0.56
LINC01238-205ENST00000567549 NR1D2Q14995 579 aa18.55■□□□□ 0.56
LINC01238-205ENST00000567549 MANEAQ5SRI9 462 aa18.55■□□□□ 0.56
LINC01238-205ENST00000567549 ZFYVE27Q5T4F4 411 aa18.55■□□□□ 0.56
LINC01238-205ENST00000567549 CBARPQ8N350 705 aaPredicted RBP18.55■□□□□ 0.56
LINC01238-205ENST00000567549 PGBD5Q8N414 524 aa18.55■□□□□ 0.56
LINC01238-205ENST00000567549 AVL9Q8NBF6 648 aa18.55■□□□□ 0.56
LINC01238-205ENST00000567549 EXD1Q8NHP7 514 aa18.55■□□□□ 0.56
LINC01238-205ENST00000567549 CTNNBL1Q8WYA6 563 aaPredicted RBP18.55■□□□□ 0.56
LINC01238-205ENST00000567549 TTC9Q92623 222 aa18.55■□□□□ 0.56
LINC01238-205ENST00000567549 SGF29Q96ES7 293 aa18.55■□□□□ 0.56
LINC01238-205ENST00000567549 SUDS3Q9H7L9 328 aaPredicted RBP18.55■□□□□ 0.56
LINC01238-205ENST00000567549 ETNK2Q9NVF9 386 aa18.55■□□□□ 0.56
LINC01238-205ENST00000567549 CAPN11Q9UMQ6 739 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms