RNA–Protein interactions for RNA: ENST00000567258.1

LINC00564-201, long intergenic non-protein coding RNA 564, humanhuman

BASIC

Gene LINC00564, Length 1,119 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00564-201ENST00000567258 ARMC12Q5T9G4 340 aa10.39□□□□□ -0.75
LINC00564-201ENST00000567258 CDCP2Q5VXM1 449 aa10.39□□□□□ -0.75
LINC00564-201ENST00000567258 FOXR1Q6PIV2 292 aa10.39□□□□□ -0.75
LINC00564-201ENST00000567258 USP45Q70EL2 814 aa10.39□□□□□ -0.75
LINC00564-201ENST00000567258 H2AFVQ71UI9 128 aa10.39□□□□□ -0.75
LINC00564-201ENST00000567258 TAF8Q7Z7C8 310 aa10.39□□□□□ -0.75
LINC00564-201ENST00000567258 SLC35F3Q8IY50 421 aa10.39□□□□□ -0.75
LINC00564-201ENST00000567258 ARL10Q8N8L6 244 aa10.39□□□□□ -0.75
LINC00564-201ENST00000567258 ZNF248Q8NDW4 579 aa10.39□□□□□ -0.75
LINC00564-201ENST00000567258 PCDH19Q8TAB3 1148 aa10.39□□□□□ -0.75
LINC00564-201ENST00000567258 VOPP1Q96AW1 172 aa10.39□□□□□ -0.75
LINC00564-201ENST00000567258 ECHDC3Q96DC8 303 aa10.39□□□□□ -0.75
LINC00564-201ENST00000567258 NUS1Q96E22 293 aa10.39□□□□□ -0.75
LINC00564-201ENST00000567258 BTBD6Q96KE9 485 aa10.39□□□□□ -0.75
LINC00564-201ENST00000567258 WDR26Q9H7D7 661 aa10.39□□□□□ -0.75
LINC00564-201ENST00000567258 POLR1BQ9H9Y6 1135 aa10.39□□□□□ -0.75
LINC00564-201ENST00000567258 PCDH18Q9HCL0 1135 aa10.39□□□□□ -0.75
LINC00564-201ENST00000567258 PHPT1Q9NRX4 125 aaPredicted RBP10.39□□□□□ -0.75
LINC00564-201ENST00000567258 THSD1Q9NS62 852 aa10.39□□□□□ -0.75
LINC00564-201ENST00000567258 UVRAGQ9P2Y5 699 aa10.39□□□□□ -0.75
LINC00564-201ENST00000567258 TTLL3Q9Y4R7 772 aa10.39□□□□□ -0.75
LINC00564-201ENST00000567258 PCDHB1Q9Y5F3 818 aa10.39□□□□□ -0.75
LINC00564-201ENST00000567258 ZFYVE26Q68DK2 2539 aa10.38□□□□□ -0.75
LINC00564-201ENST00000567258 LY6G6EA0A0G2JKS1 128 aa10.38□□□□□ -0.75
LINC00564-201ENST00000567258 TMX2-CTNND1H3BSU7 103 aa10.38□□□□□ -0.75
LINC00564-201ENST00000567258 TRAFD1O14545 582 aaPredicted RBP10.38□□□□□ -0.75
LINC00564-201ENST00000567258 TNFRSF10CO14798 259 aa10.38□□□□□ -0.75
LINC00564-201ENST00000567258 AKR1B10O60218 316 aa10.38□□□□□ -0.75
LINC00564-201ENST00000567258 MAFKO60675 156 aa10.38□□□□□ -0.75
LINC00564-201ENST00000567258 GYPCP04921 128 aa10.38□□□□□ -0.75
LINC00564-201ENST00000567258 TCF4P15884 667 aa10.38□□□□□ -0.75
LINC00564-201ENST00000567258 CES1P23141 567 aa10.38□□□□□ -0.75
LINC00564-201ENST00000567258 PBX1P40424 430 aa10.38□□□□□ -0.75
LINC00564-201ENST00000567258 LSSP48449 732 aa10.38□□□□□ -0.75
LINC00564-201ENST00000567258 ERVPABLB-1P60509 514 aa10.38□□□□□ -0.75
LINC00564-201ENST00000567258 PDK2Q15119 407 aa10.38□□□□□ -0.75
LINC00564-201ENST00000567258 IFI16Q16666 785 aaKnown RBP10.38□□□□□ -0.75
LINC00564-201ENST00000567258 ISXQ2M1V0 245 aa10.38□□□□□ -0.75
LINC00564-201ENST00000567258 ZSCAN23Q3MJ62 389 aa10.38□□□□□ -0.75
LINC00564-201ENST00000567258 PNCKQ6P2M8 343 aa10.38□□□□□ -0.75
LINC00564-201ENST00000567258 CRTC1Q6UUV9 634 aa10.38□□□□□ -0.75
LINC00564-201ENST00000567258 ZSWIM9Q86XI8 627 aa10.38□□□□□ -0.75
LINC00564-201ENST00000567258 ARL14Q8N4G2 192 aa10.38□□□□□ -0.75
LINC00564-201ENST00000567258 PLA2G15Q8NCC3 412 aa10.38□□□□□ -0.75
LINC00564-201ENST00000567258 FAM46DQ8NEK8 389 aa10.38□□□□□ -0.75
LINC00564-201ENST00000567258 OR8K1Q8NGG5 319 aa10.38□□□□□ -0.75
LINC00564-201ENST00000567258 CCDC97Q96F63 343 aaPredicted RBP10.38□□□□□ -0.75
LINC00564-201ENST00000567258 ZNF830Q96NB3 372 aaPredicted RBP10.38□□□□□ -0.75
LINC00564-201ENST00000567258 GFM1Q96RP9 751 aaKnown RBP10.38□□□□□ -0.75
LINC00564-201ENST00000567258 CCDC3Q9BQI4 270 aa10.38□□□□□ -0.75
LINC00564-201ENST00000567258 MGME1Q9BQP7 344 aa10.38□□□□□ -0.75
LINC00564-201ENST00000567258 XPO4Q9C0E2 1151 aaKnown RBP10.38□□□□□ -0.75
LINC00564-201ENST00000567258 STRADBQ9C0K7 418 aa10.38□□□□□ -0.75
LINC00564-201ENST00000567258 POLR1EQ9GZS1 481 aaKnown RBP10.38□□□□□ -0.75
LINC00564-201ENST00000567258 CLPBQ9H078 707 aa10.38□□□□□ -0.75
LINC00564-201ENST00000567258 CAAP1Q9H8G2 361 aa10.38□□□□□ -0.75
LINC00564-201ENST00000567258 CYP4F12Q9HCS2 524 aa10.38□□□□□ -0.75
LINC00564-201ENST00000567258 NT5MQ9NPB1 228 aa10.38□□□□□ -0.75
LINC00564-201ENST00000567258 ETNK2Q9NVF9 386 aa10.38□□□□□ -0.75
LINC00564-201ENST00000567258 B4GALT6Q9UBX8 382 aa10.38□□□□□ -0.75
LINC00564-201ENST00000567258 SATB2Q9UPW6 733 aa10.38□□□□□ -0.75
LINC00564-201ENST00000567258 DGKBQ9Y6T7 804 aa10.38□□□□□ -0.75
LINC00564-201ENST00000567258 U3KQA8 63 aa10.38□□□□□ -0.75
LINC00564-201ENST00000567258 BPTFQ12830 3046 aa10.38□□□□□ -0.75
LINC00564-201ENST00000567258 PSMD11O00231 422 aa10.37□□□□□ -0.75
LINC00564-201ENST00000567258 HTRA2O43464 458 aaPredicted RBP10.37□□□□□ -0.75
LINC00564-201ENST00000567258 TLX3O43711 291 aaPredicted RBP10.37□□□□□ -0.75
LINC00564-201ENST00000567258 HOXC4P09017 264 aaPredicted RBP10.37□□□□□ -0.75
LINC00564-201ENST00000567258 MYCLP1P12525 358 aaPredicted RBP10.37□□□□□ -0.75
LINC00564-201ENST00000567258 MX2P20592 715 aa10.37□□□□□ -0.75
LINC00564-201ENST00000567258 UCNP55089 124 aa10.37□□□□□ -0.75
LINC00564-201ENST00000567258 MAXP61244 160 aa10.37□□□□□ -0.75
LINC00564-201ENST00000567258 SLC25A11Q02978 314 aaKnown RBP10.37□□□□□ -0.75
LINC00564-201ENST00000567258 DHX9Q08211 1270 aaKnown RBP10.37□□□□□ -0.75
LINC00564-201ENST00000567258 ILF3Q12906 894 aaKnown RBP eCLIP10.37□□□□□ -0.75
LINC00564-201ENST00000567258 RALGDSQ12967 914 aa10.37□□□□□ -0.75
LINC00564-201ENST00000567258 PERM1Q5SV97 790 aa10.37□□□□□ -0.75
LINC00564-201ENST00000567258 SPECC1LQ69YQ0 1117 aa10.37□□□□□ -0.75
LINC00564-201ENST00000567258 RAET1GQ6H3X3 334 aa10.37□□□□□ -0.75
LINC00564-201ENST00000567258 TP53INP2Q8IXH6 220 aa10.37□□□□□ -0.75
LINC00564-201ENST00000567258 CCNYQ8ND76 341 aa10.37□□□□□ -0.75
LINC00564-201ENST00000567258 WDR36Q8NI36 951 aaKnown RBP10.37□□□□□ -0.75
LINC00564-201ENST00000567258 KIAA1524Q8TCG1 905 aa10.37□□□□□ -0.75
LINC00564-201ENST00000567258 FUBP1Q96AE4 644 aaKnown RBP10.37□□□□□ -0.75
LINC00564-201ENST00000567258 ATXN7L3BQ96GX2 97 aa10.37□□□□□ -0.75
LINC00564-201ENST00000567258 NAF1Q96HR8 494 aaKnown RBP10.37□□□□□ -0.75
LINC00564-201ENST00000567258 RBM15Q96T37 977 aaKnown RBP eCLIP10.37□□□□□ -0.75
LINC00564-201ENST00000567258 SEMA3CQ99985 751 aa10.37□□□□□ -0.75
LINC00564-201ENST00000567258 MAK16Q9BXY0 300 aaKnown RBP10.37□□□□□ -0.75
LINC00564-201ENST00000567258 DPEP2Q9H4A9 486 aa10.37□□□□□ -0.75
LINC00564-201ENST00000567258 SUDS3Q9H7L9 328 aaPredicted RBP10.37□□□□□ -0.75
LINC00564-201ENST00000567258 NOD2Q9HC29 1040 aa10.37□□□□□ -0.75
LINC00564-201ENST00000567258 DNPEPQ9ULA0 475 aa10.37□□□□□ -0.75
LINC00564-201ENST00000567258 CCDC187A0A096LP49 1063 aa10.36□□□□□ -0.75
LINC00564-201ENST00000567258 PRSS38A1L453 326 aa10.36□□□□□ -0.75
LINC00564-201ENST00000567258 TMEM202A6NGA9 273 aa10.36□□□□□ -0.75
LINC00564-201ENST00000567258 MATN3O15232 486 aa10.36□□□□□ -0.75
LINC00564-201ENST00000567258 PROSCO94903 275 aa10.36□□□□□ -0.75
LINC00564-201ENST00000567258 HEXIM1O94992 359 aaKnown RBP10.36□□□□□ -0.75
LINC00564-201ENST00000567258 PGLSO95336 258 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms