RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 GPR150Q8NGU9 434 aa16.77■□□□□ 0.28
CMTM3-213ENST00000566756 PBXIP1Q96AQ6 731 aa16.77■□□□□ 0.28
CMTM3-213ENST00000566756 CNBD2Q96M20 576 aa16.77■□□□□ 0.28
CMTM3-213ENST00000566756 RBM38Q9H0Z9 239 aaKnown RBP16.77■□□□□ 0.28
CMTM3-213ENST00000566756 ATXN3LQ9H3M9 355 aa16.77■□□□□ 0.28
CMTM3-213ENST00000566756 CYP4F12Q9HCS2 524 aa16.77■□□□□ 0.28
CMTM3-213ENST00000566756 THEGQ9P2T0 379 aa16.77■□□□□ 0.28
CMTM3-213ENST00000566756 RIMKLBQ9ULI2 386 aa16.77■□□□□ 0.28
CMTM3-213ENST00000566756 DMTF1Q9Y222 760 aa16.77■□□□□ 0.28
CMTM3-213ENST00000566756 PCDHB5Q9Y5E4 795 aa16.77■□□□□ 0.28
CMTM3-213ENST00000566756 H7C4K7 107 aa16.77■□□□□ 0.27
CMTM3-213ENST00000566756 MRASO14807 208 aa16.77■□□□□ 0.27
CMTM3-213ENST00000566756 SRP72O76094 671 aaKnown RBP16.77■□□□□ 0.27
CMTM3-213ENST00000566756 PGM3O95394 542 aa16.77■□□□□ 0.27
CMTM3-213ENST00000566756 EFEMP2O95967 443 aa16.77■□□□□ 0.27
CMTM3-213ENST00000566756 S1PR4O95977 384 aa16.77■□□□□ 0.27
CMTM3-213ENST00000566756 PSMC3P17980 439 aa16.77■□□□□ 0.27
CMTM3-213ENST00000566756 NR1H2P55055 460 aa16.77■□□□□ 0.27
CMTM3-213ENST00000566756 HERVK_113P63132 956 aa16.77■□□□□ 0.27
CMTM3-213ENST00000566756 CDKL1Q00532 357 aa16.77■□□□□ 0.27
CMTM3-213ENST00000566756 PRMT9Q6P2P2 845 aa16.77■□□□□ 0.27
CMTM3-213ENST00000566756 PAOXQ6QHF9 649 aa16.77■□□□□ 0.27
CMTM3-213ENST00000566756 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.77■□□□□ 0.274e-6■■■□□ 19.2
CMTM3-213ENST00000566756 ISCA2Q86U28 154 aa16.77■□□□□ 0.27
CMTM3-213ENST00000566756 MON1AQ86VX9 555 aa16.77■□□□□ 0.27
CMTM3-213ENST00000566756 CHERPQ8IWX8 916 aaKnown RBP16.77■□□□□ 0.27
CMTM3-213ENST00000566756 CLYBLQ8N0X4 340 aa16.77■□□□□ 0.27
CMTM3-213ENST00000566756 PCDH20Q8N6Y1 951 aaKnown RBP16.77■□□□□ 0.27
CMTM3-213ENST00000566756 DNAJC5GQ8N7S2 189 aa16.77■□□□□ 0.27
CMTM3-213ENST00000566756 PCYOX1LQ8NBM8 494 aa16.77■□□□□ 0.27
CMTM3-213ENST00000566756 LPGAT1Q92604 370 aa16.77■□□□□ 0.27
CMTM3-213ENST00000566756 ATP6V1E2Q96A05 226 aa16.77■□□□□ 0.27
CMTM3-213ENST00000566756 EME1Q96AY2 570 aa16.77■□□□□ 0.27
CMTM3-213ENST00000566756 ERVK-6Q9BXR3 956 aa16.77■□□□□ 0.27
CMTM3-213ENST00000566756 ZYG11BQ9C0D3 744 aa16.77■□□□□ 0.27
CMTM3-213ENST00000566756 C11orf49Q9H6J7 331 aa16.77■□□□□ 0.27
CMTM3-213ENST00000566756 TNFRSF12AQ9NP84 129 aa16.77■□□□□ 0.27
CMTM3-213ENST00000566756 MPP6Q9NZW5 540 aa16.77■□□□□ 0.27
CMTM3-213ENST00000566756 SCML2Q9UQR0 700 aa16.77■□□□□ 0.27
CMTM3-213ENST00000566756 MTF2Q9Y483 593 aaPredicted RBP16.77■□□□□ 0.27
CMTM3-213ENST00000566756 GREB1Q4ZG55 1949 aa16.76■□□□□ 0.27
CMTM3-213ENST00000566756 IGLV3-10A0A075B6K4 115 aa16.76■□□□□ 0.27
CMTM3-213ENST00000566756 LOC285095A0A1B0GVY8 99 aa16.76■□□□□ 0.27
CMTM3-213ENST00000566756 ARHGAP10A1A4S6 786 aa16.76■□□□□ 0.27
CMTM3-213ENST00000566756 VILLO15195 856 aa16.76■□□□□ 0.27
CMTM3-213ENST00000566756 STAMBPO95630 424 aa16.76■□□□□ 0.27
CMTM3-213ENST00000566756 MMP2P08253 660 aa16.76■□□□□ 0.27
CMTM3-213ENST00000566756 SUOXP51687 545 aa16.76■□□□□ 0.27
CMTM3-213ENST00000566756 STX1BP61266 288 aa16.76■□□□□ 0.27
CMTM3-213ENST00000566756 PCSK7Q16549 785 aa16.76■□□□□ 0.27
CMTM3-213ENST00000566756 PIK3R6Q5UE93 754 aa16.76■□□□□ 0.27
CMTM3-213ENST00000566756 B3GNT6Q6ZMB0 384 aa16.76■□□□□ 0.27
CMTM3-213ENST00000566756 ANKS3Q6ZW76 656 aa16.76■□□□□ 0.27
CMTM3-213ENST00000566756 ANKRD49Q8WVL7 239 aa16.76■□□□□ 0.27
CMTM3-213ENST00000566756 ZUFSPQ96AP4 578 aa16.76■□□□□ 0.27
CMTM3-213ENST00000566756 UNKQ9C0B0 810 aaKnown RBP16.76■□□□□ 0.27
CMTM3-213ENST00000566756 NMUR1Q9HB89 426 aa16.76■□□□□ 0.27
CMTM3-213ENST00000566756 NT5MQ9NPB1 228 aa16.76■□□□□ 0.27
CMTM3-213ENST00000566756 ARMC1Q9NVT9 282 aa16.76■□□□□ 0.27
CMTM3-213ENST00000566756 ETAA1Q9NY74 926 aa16.76■□□□□ 0.27
CMTM3-213ENST00000566756 ABI2Q9NYB9 513 aaPredicted RBP16.76■□□□□ 0.27
CMTM3-213ENST00000566756 CCDC167Q9P0B6 97 aa16.76■□□□□ 0.27
CMTM3-213ENST00000566756 KIAA0100Q14667 2235 aaKnown RBP16.75■□□□□ 0.27
CMTM3-213ENST00000566756 ABHD14A-ACY1A0A1B0GW23 586 aa16.75■□□□□ 0.27
CMTM3-213ENST00000566756 PRORSD1PA6NEY8 169 aa16.75■□□□□ 0.27
CMTM3-213ENST00000566756 FDXRP22570 491 aa16.75■□□□□ 0.27
CMTM3-213ENST00000566756 GPR17Q13304 367 aa16.75■□□□□ 0.27
CMTM3-213ENST00000566756 UGT3A2Q3SY77 523 aa16.75■□□□□ 0.27
CMTM3-213ENST00000566756 NADK2Q4G0N4 442 aa16.75■□□□□ 0.27
CMTM3-213ENST00000566756 C6orf52Q5T4I8 152 aa16.75■□□□□ 0.27
CMTM3-213ENST00000566756 CYHR1Q6ZMK1 362 aa16.75■□□□□ 0.27
CMTM3-213ENST00000566756 RNF135Q8IUD6 432 aa16.75■□□□□ 0.27
CMTM3-213ENST00000566756 RHEBL1Q8TAI7 183 aa16.75■□□□□ 0.27
CMTM3-213ENST00000566756 C19orf60Q96EN9 201 aa16.75■□□□□ 0.27
CMTM3-213ENST00000566756 HOPXQ9BPY8 73 aaPredicted RBP16.75■□□□□ 0.27
CMTM3-213ENST00000566756 HAUS8Q9BT25 410 aa16.75■□□□□ 0.27
CMTM3-213ENST00000566756 IL37Q9NZH6 218 aa16.75■□□□□ 0.27
CMTM3-213ENST00000566756 HCSTQ9UBK5 93 aa16.75■□□□□ 0.27
CMTM3-213ENST00000566756 COL4A6Q14031 1691 aa16.75■□□□□ 0.27
CMTM3-213ENST00000566756 A0A1W2PQH9 124 aa16.75■□□□□ 0.27
CMTM3-213ENST00000566756 UBFD1O14562 309 aaKnown RBP16.75■□□□□ 0.27
CMTM3-213ENST00000566756 EPOP01588 193 aa16.75■□□□□ 0.27
CMTM3-213ENST00000566756 TCN1P20061 433 aaPredicted RBP16.75■□□□□ 0.27
CMTM3-213ENST00000566756 CD86P42081 329 aa16.75■□□□□ 0.27
CMTM3-213ENST00000566756 NAA20P61599 178 aa16.75■□□□□ 0.27
CMTM3-213ENST00000566756 PRAMEP78395 509 aa16.75■□□□□ 0.27
CMTM3-213ENST00000566756 TMEM259Q4ZIN3 620 aa16.75■□□□□ 0.27
CMTM3-213ENST00000566756 UNC50Q53HI1 259 aa16.75■□□□□ 0.27
CMTM3-213ENST00000566756 COQ5Q5HYK3 327 aa16.75■□□□□ 0.27
CMTM3-213ENST00000566756 RBM44Q6ZP01 1051 aaKnown RBP16.75■□□□□ 0.27
CMTM3-213ENST00000566756 NUP93Q8N1F7 819 aa16.75■□□□□ 0.27
CMTM3-213ENST00000566756 ANKFN1Q8N957 763 aa16.75■□□□□ 0.27
CMTM3-213ENST00000566756 FAM156AQ8NDB6 213 aa16.75■□□□□ 0.27
CMTM3-213ENST00000566756 C2orf15Q8WU43 125 aaKnown RBP16.75■□□□□ 0.27
CMTM3-213ENST00000566756 HMCESQ96FZ2 354 aa16.75■□□□□ 0.27
CMTM3-213ENST00000566756 PAWRQ96IZ0 340 aaKnown RBP16.75■□□□□ 0.27
CMTM3-213ENST00000566756 FBXO44Q9H4M3 255 aa16.75■□□□□ 0.27
CMTM3-213ENST00000566756 NDUFAF1Q9Y375 327 aa16.75■□□□□ 0.27
CMTM3-213ENST00000566756 OR6B1O95007 311 aa16.74■□□□□ 0.27
CMTM3-213ENST00000566756 MOCS2O96007 188 aaPredicted RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms