RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 SESN2P58004 480 aaPredicted RBP11.47□□□□□ -0.57
KARS-207ENST00000566560 SLC7A5Q01650 507 aa11.47□□□□□ -0.57
KARS-207ENST00000566560 CALCOCO2Q13137 446 aa11.47□□□□□ -0.57
KARS-207ENST00000566560 SGCGQ13326 291 aa11.47□□□□□ -0.57
KARS-207ENST00000566560 MTM1Q13496 603 aa11.47□□□□□ -0.57
KARS-207ENST00000566560 POU6F1Q14863 301 aa11.47□□□□□ -0.57
KARS-207ENST00000566560 MORF4L2Q15014 288 aa11.47□□□□□ -0.57
KARS-207ENST00000566560 LPAL2Q16609 132 aa11.47□□□□□ -0.57
KARS-207ENST00000566560 SPDYCQ5MJ68 293 aa11.47□□□□□ -0.57
KARS-207ENST00000566560 HSD11B1LQ7Z5J1 315 aa11.47□□□□□ -0.57
KARS-207ENST00000566560 NAT8LQ8N9F0 302 aa11.47□□□□□ -0.57
KARS-207ENST00000566560 BBOF1Q8ND07 529 aa11.47□□□□□ -0.57
KARS-207ENST00000566560 ATOH1Q92858 354 aaPredicted RBP11.47□□□□□ -0.57
KARS-207ENST00000566560 KLK6Q92876 244 aa11.47□□□□□ -0.57
KARS-207ENST00000566560 NUS1Q96E22 293 aa11.47□□□□□ -0.57
KARS-207ENST00000566560 SERPINB12Q96P63 405 aa11.47□□□□□ -0.57
KARS-207ENST00000566560 MYOCQ99972 504 aa11.47□□□□□ -0.57
KARS-207ENST00000566560 C1QTNF7Q9BXJ2 289 aa11.47□□□□□ -0.57
KARS-207ENST00000566560 XAB2Q9HCS7 855 aaKnown RBP11.47□□□□□ -0.57
KARS-207ENST00000566560 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.47□□□□□ -0.578e-10■■■□□ 18.3
KARS-207ENST00000566560 RAB23Q9ULC3 237 aa11.47□□□□□ -0.57
KARS-207ENST00000566560 SMG5Q9UPR3 1016 aaKnown RBP11.47□□□□□ -0.57
KARS-207ENST00000566560 SNX24Q9Y343 169 aa11.47□□□□□ -0.57
KARS-207ENST00000566560 GPR179Q6PRD1 2367 aa11.46□□□□□ -0.57
KARS-207ENST00000566560 ESYT3A0FGR9 886 aa11.46□□□□□ -0.57
KARS-207ENST00000566560 AP3B1O00203 1094 aa11.46□□□□□ -0.57
KARS-207ENST00000566560 AURKAO14965 403 aa11.46□□□□□ -0.57
KARS-207ENST00000566560 SLC31A1O15431 190 aa11.46□□□□□ -0.57
KARS-207ENST00000566560 RECQL5O94762 991 aaPredicted RBP11.46□□□□□ -0.57
KARS-207ENST00000566560 CRTAMO95727 393 aa11.46□□□□□ -0.57
KARS-207ENST00000566560 TPH1P17752 444 aa11.46□□□□□ -0.57
KARS-207ENST00000566560 HNRNPA2B1P22626 353 aaKnown RBP11.46□□□□□ -0.57
KARS-207ENST00000566560 CD27P26842 260 aa11.46□□□□□ -0.57
KARS-207ENST00000566560 NUDT1P36639 197 aa11.46□□□□□ -0.57
KARS-207ENST00000566560 ETV3P41162 512 aa11.46□□□□□ -0.57
KARS-207ENST00000566560 FGL2Q14314 439 aa11.46□□□□□ -0.57
KARS-207ENST00000566560 TAF1AQ15573 450 aaPredicted RBP11.46□□□□□ -0.57
KARS-207ENST00000566560 CDKN3Q16667 212 aa11.46□□□□□ -0.57
KARS-207ENST00000566560 GLE1Q53GS7 698 aaKnown RBP11.46□□□□□ -0.57
KARS-207ENST00000566560 WDR45BQ5MNZ6 344 aa11.46□□□□□ -0.57
KARS-207ENST00000566560 TEX35Q5T0J7 233 aa11.46□□□□□ -0.57
KARS-207ENST00000566560 DUPD1Q68J44 220 aa11.46□□□□□ -0.57
KARS-207ENST00000566560 HIBCHQ6NVY1 386 aaPredicted RBP11.46□□□□□ -0.57
KARS-207ENST00000566560 LRRC8BQ6P9F7 803 aa11.46□□□□□ -0.57
KARS-207ENST00000566560 CYP2U1Q7Z449 544 aa11.46□□□□□ -0.57
KARS-207ENST00000566560 RGL4Q8IZJ4 473 aa11.46□□□□□ -0.57
KARS-207ENST00000566560 TTC30BQ8N4P2 665 aa11.46□□□□□ -0.57
KARS-207ENST00000566560 MCUQ8NE86 351 aa11.46□□□□□ -0.57
KARS-207ENST00000566560 DENND6BQ8NEG7 585 aa11.46□□□□□ -0.57
KARS-207ENST00000566560 PPHLN1Q8NEY8 458 aaKnown RBP11.46□□□□□ -0.57
KARS-207ENST00000566560 DTD2Q96FN9 168 aa11.46□□□□□ -0.57
KARS-207ENST00000566560 ZC3H10Q96K80 434 aaKnown RBP11.46□□□□□ -0.57
KARS-207ENST00000566560 COQ10AQ96MF6 247 aa11.46□□□□□ -0.57
KARS-207ENST00000566560 C1QTNF2Q9BXJ5 285 aa11.46□□□□□ -0.57
KARS-207ENST00000566560 SLC17A9Q9BYT1 436 aa11.46□□□□□ -0.57
KARS-207ENST00000566560 MIR1-1HGQ9H1L0 117 aa11.46□□□□□ -0.57
KARS-207ENST00000566560 FZD3Q9NPG1 666 aa11.46□□□□□ -0.57
KARS-207ENST00000566560 FAM86C1Q9NVL1 165 aa11.46□□□□□ -0.57
KARS-207ENST00000566560 PKD2L2Q9NZM6 624 aa11.46□□□□□ -0.57
KARS-207ENST00000566560 BFARQ9NZS9 450 aa11.46□□□□□ -0.57
KARS-207ENST00000566560 WHRNQ9P202 907 aa11.46□□□□□ -0.57
KARS-207ENST00000566560 EIF2B4Q9UI10 523 aaKnown RBP11.46□□□□□ -0.57
KARS-207ENST00000566560 DMTF1Q9Y222 760 aa11.46□□□□□ -0.57
KARS-207ENST00000566560 ARL5AQ9Y689 179 aa11.46□□□□□ -0.57
KARS-207ENST00000566560 A0A1W2PPC4 97 aa11.45□□□□□ -0.58
KARS-207ENST00000566560 HEATR9A2RTY3 570 aa11.45□□□□□ -0.58
KARS-207ENST00000566560 C2orf81A6NN90 581 aa11.45□□□□□ -0.58
KARS-207ENST00000566560 WNT9AO14904 365 aa11.45□□□□□ -0.58
KARS-207ENST00000566560 BUD23O43709 281 aaKnown RBP11.45□□□□□ -0.58
KARS-207ENST00000566560 PCCBP05166 539 aa11.45□□□□□ -0.58
KARS-207ENST00000566560 CCNYL3P0C7X3 344 aa11.45□□□□□ -0.58
KARS-207ENST00000566560 MLNP12872 115 aa11.45□□□□□ -0.58
KARS-207ENST00000566560 GM2AP17900 193 aa11.45□□□□□ -0.58
KARS-207ENST00000566560 ITPKAP23677 461 aa11.45□□□□□ -0.58
KARS-207ENST00000566560 MGAT1P26572 445 aa11.45□□□□□ -0.58
KARS-207ENST00000566560 AKT2P31751 481 aa11.45□□□□□ -0.58
KARS-207ENST00000566560 HMGCLP35914 325 aa11.45□□□□□ -0.58
KARS-207ENST00000566560 ZNF140P52738 457 aaPredicted RBP11.45□□□□□ -0.58
KARS-207ENST00000566560 GUCY2DQ02846 1103 aa11.45□□□□□ -0.58
KARS-207ENST00000566560 PTSQ03393 145 aa11.45□□□□□ -0.58
KARS-207ENST00000566560 IRF4Q15306 451 aa11.45□□□□□ -0.58
KARS-207ENST00000566560 CCDC38Q502W7 563 aa11.45□□□□□ -0.58
KARS-207ENST00000566560 CERCAMQ5T4B2 595 aa11.45□□□□□ -0.58
KARS-207ENST00000566560 ALS2CLQ60I27 953 aa11.45□□□□□ -0.58
KARS-207ENST00000566560 Q6ZVL8 140 aa11.45□□□□□ -0.58
KARS-207ENST00000566560 TMC3Q7Z5M5 1100 aa11.45□□□□□ -0.58
KARS-207ENST00000566560 CAND1Q86VP6 1230 aaKnown RBP11.45□□□□□ -0.58
KARS-207ENST00000566560 ZCCHC9Q8N567 271 aaKnown RBP11.45□□□□□ -0.58
KARS-207ENST00000566560 TP53I13Q8NBR0 393 aaPredicted RBP11.45□□□□□ -0.58
KARS-207ENST00000566560 BRSK1Q8TDC3 778 aa11.45□□□□□ -0.58
KARS-207ENST00000566560 ASB12Q8WXK4 309 aa11.45□□□□□ -0.58
KARS-207ENST00000566560 SERAC1Q96JX3 654 aa11.45□□□□□ -0.58
KARS-207ENST00000566560 SLC6A18Q96N87 628 aa11.45□□□□□ -0.58
KARS-207ENST00000566560 FRMD8Q9BZ67 464 aaPredicted RBP11.45□□□□□ -0.58
KARS-207ENST00000566560 IL22Q9GZX6 179 aa11.45□□□□□ -0.58
KARS-207ENST00000566560 EBF2Q9HAK2 575 aa11.45□□□□□ -0.58
KARS-207ENST00000566560 SYBUQ9NX95 663 aa11.45□□□□□ -0.58
KARS-207ENST00000566560 GRHL1Q9NZI5 618 aa11.45□□□□□ -0.58
KARS-207ENST00000566560 CD84Q9UIB8 345 aa11.45□□□□□ -0.58
KARS-207ENST00000566560 ANAPC5Q9UJX4 755 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms