RNA–Protein interactions for RNA: ENST00000566549.5

MSLN-207, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-207ENST00000566549 PTGDR2Q9Y5Y4 395 aa18.7■□□□□ 0.58
MSLN-207ENST00000566549 TCAF2A6NFQ2 919 aa18.69■□□□□ 0.58
MSLN-207ENST00000566549 SMIM24O75264 130 aa18.69■□□□□ 0.58
MSLN-207ENST00000566549 SMNDC1O75940 238 aaKnown RBP eCLIP18.69■□□□□ 0.58
MSLN-207ENST00000566549 SETD3Q86TU7 594 aaPredicted RBP18.69■□□□□ 0.58
MSLN-207ENST00000566549 PELI3Q8N2H9 469 aa18.69■□□□□ 0.58
MSLN-207ENST00000566549 FAM156AQ8NDB6 213 aa18.69■□□□□ 0.58
MSLN-207ENST00000566549 GPR150Q8NGU9 434 aa18.69■□□□□ 0.58
MSLN-207ENST00000566549 JADE3Q92613 823 aa18.69■□□□□ 0.58
MSLN-207ENST00000566549 NSUN5Q96P11 429 aaKnown RBP18.69■□□□□ 0.58
MSLN-207ENST00000566549 AARSD1Q9BTE6 412 aaKnown RBP18.69■□□□□ 0.58
MSLN-207ENST00000566549 MEAF6Q9HAF1 191 aa18.69■□□□□ 0.58
MSLN-207ENST00000566549 FBRSL1Q9HCM7 1045 aaKnown RBP18.69■□□□□ 0.58
MSLN-207ENST00000566549 CCDC167Q9P0B6 97 aa18.69■□□□□ 0.58
MSLN-207ENST00000566549 RAI2Q9Y5P3 530 aa18.69■□□□□ 0.58
MSLN-207ENST00000566549 SCN5AQ14524 2016 aa18.69■□□□□ 0.58
MSLN-207ENST00000566549 UBDO15205 165 aa18.69■□□□□ 0.58
MSLN-207ENST00000566549 C1RP00736 705 aa18.69■□□□□ 0.58
MSLN-207ENST00000566549 LAMB3Q13751 1172 aa18.69■□□□□ 0.58
MSLN-207ENST00000566549 ADGRF1Q5T601 910 aa18.69■□□□□ 0.58
MSLN-207ENST00000566549 PAQR3Q6TCH7 311 aa18.69■□□□□ 0.58
MSLN-207ENST00000566549 CARNMT1Q8N4J0 409 aa18.69■□□□□ 0.58
MSLN-207ENST00000566549 PLD4Q96BZ4 506 aa18.69■□□□□ 0.58
MSLN-207ENST00000566549 ECSITQ9BQ95 431 aa18.69■□□□□ 0.58
MSLN-207ENST00000566549 EFCAB1Q9HAE3 211 aa18.69■□□□□ 0.58
MSLN-207ENST00000566549 NLE1Q9NVX2 485 aaPredicted RBP18.69■□□□□ 0.58
MSLN-207ENST00000566549 STK39Q9UEW8 545 aa18.69■□□□□ 0.58
MSLN-207ENST00000566549 AFF4Q9UHB7 1163 aaKnown RBP18.69■□□□□ 0.58
MSLN-207ENST00000566549 YIPF1Q9Y548 306 aa18.69■□□□□ 0.58
MSLN-207ENST00000566549 A0A1B0GVM2 712 aa18.68■□□□□ 0.58
MSLN-207ENST00000566549 ILVBLA1L0T0 632 aa18.68■□□□□ 0.58
MSLN-207ENST00000566549 GPR39O43194 453 aa18.68■□□□□ 0.58
MSLN-207ENST00000566549 GPC4O75487 556 aa18.68■□□□□ 0.58
MSLN-207ENST00000566549 SRP72O76094 671 aaKnown RBP18.68■□□□□ 0.58
MSLN-207ENST00000566549 GFAPP14136 432 aa18.68■□□□□ 0.58
MSLN-207ENST00000566549 PEX2P28328 305 aa18.68■□□□□ 0.58
MSLN-207ENST00000566549 ALDH1A3P47895 512 aa18.68■□□□□ 0.58
MSLN-207ENST00000566549 HERVK_113P63132 956 aa18.68■□□□□ 0.58
MSLN-207ENST00000566549 MTA1Q13330 715 aa18.68■□□□□ 0.58
MSLN-207ENST00000566549 CEACAM7Q14002 265 aa18.68■□□□□ 0.58
MSLN-207ENST00000566549 TMEM154Q6P9G4 183 aa18.68■□□□□ 0.58
MSLN-207ENST00000566549 PCDH20Q8N6Y1 951 aaKnown RBP18.68■□□□□ 0.58
MSLN-207ENST00000566549 HMGCLL1Q8TB92 370 aa18.68■□□□□ 0.58
MSLN-207ENST00000566549 SERPINI1Q99574 410 aa18.68■□□□□ 0.58
MSLN-207ENST00000566549 ERVK-6Q9BXR3 956 aa18.68■□□□□ 0.58
MSLN-207ENST00000566549 CWH43Q9H720 699 aa18.68■□□□□ 0.58
MSLN-207ENST00000566549 GIMAP2Q9UG22 337 aa18.68■□□□□ 0.58
MSLN-207ENST00000566549 TRIM17Q9Y577 477 aa18.68■□□□□ 0.58
MSLN-207ENST00000566549 NCF1BA6NI72 391 aaPredicted RBP18.68■□□□□ 0.58
MSLN-207ENST00000566549 NCF1CA8MVU1 366 aaPredicted RBP18.68■□□□□ 0.58
MSLN-207ENST00000566549 SLC22A2O15244 555 aa18.68■□□□□ 0.58
MSLN-207ENST00000566549 OR1I1O60431 355 aa18.68■□□□□ 0.58
MSLN-207ENST00000566549 NCF1P14598 390 aaPredicted RBP18.68■□□□□ 0.58
MSLN-207ENST00000566549 CR2P20023 1033 aa18.68■□□□□ 0.58
MSLN-207ENST00000566549 OGNP20774 298 aaKnown RBP18.68■□□□□ 0.58
MSLN-207ENST00000566549 ARF5P84085 180 aa18.68■□□□□ 0.58
MSLN-207ENST00000566549 AGKQ53H12 422 aa18.68■□□□□ 0.58
MSLN-207ENST00000566549 CXorf57Q6NSI4 855 aaKnown RBP18.68■□□□□ 0.58
MSLN-207ENST00000566549 OR9I1Q8NGQ6 314 aa18.68■□□□□ 0.58
MSLN-207ENST00000566549 ZNF461Q8TAF7 563 aa18.68■□□□□ 0.58
MSLN-207ENST00000566549 PEX13Q92968 403 aa18.68■□□□□ 0.58
MSLN-207ENST00000566549 FAR2Q96K12 515 aa18.68■□□□□ 0.58
MSLN-207ENST00000566549 C3orf30Q96M34 536 aa18.68■□□□□ 0.58
MSLN-207ENST00000566549 SLC22A12Q96S37 553 aa18.68■□□□□ 0.58
MSLN-207ENST00000566549 CCDC68Q9H2F9 335 aa18.68■□□□□ 0.58
MSLN-207ENST00000566549 GALPQ9UBC7 116 aa18.68■□□□□ 0.58
MSLN-207ENST00000566549 FKBPLQ9UIM3 349 aa18.68■□□□□ 0.58
MSLN-207ENST00000566549 IKZF3Q9UKT9 509 aa18.68■□□□□ 0.58
MSLN-207ENST00000566549 C2orf81A6NN90 581 aa18.67■□□□□ 0.58
MSLN-207ENST00000566549 NDUFS3O75489 264 aa18.67■□□□□ 0.58
MSLN-207ENST00000566549 MZF1P28698 734 aaPredicted RBP18.67■□□□□ 0.58
MSLN-207ENST00000566549 SLC26A3P40879 764 aa18.67■□□□□ 0.58
MSLN-207ENST00000566549 NME5P56597 212 aa18.67■□□□□ 0.58
MSLN-207ENST00000566549 SH3BP2P78314 561 aa18.67■□□□□ 0.58
MSLN-207ENST00000566549 MRPS22P82650 360 aaKnown RBP18.67■□□□□ 0.58
MSLN-207ENST00000566549 BTG3Q14201 252 aaPredicted RBP18.67■□□□□ 0.58
MSLN-207ENST00000566549 FLOT2Q14254 428 aa18.67■□□□□ 0.58
MSLN-207ENST00000566549 TRIP10Q15642 601 aa18.67■□□□□ 0.58
MSLN-207ENST00000566549 ZNF423Q2M1K9 1284 aa18.67■□□□□ 0.58
MSLN-207ENST00000566549 PSAPL1Q6NUJ1 521 aa18.67■□□□□ 0.58
MSLN-207ENST00000566549 CYHR1Q6ZMK1 362 aa18.67■□□□□ 0.58
MSLN-207ENST00000566549 KBTBD6Q86V97 674 aa18.67■□□□□ 0.58
MSLN-207ENST00000566549 PIANPQ8IYJ0 282 aa18.67■□□□□ 0.58
MSLN-207ENST00000566549 PGAM4Q8N0Y7 254 aa18.67■□□□□ 0.58
MSLN-207ENST00000566549 GDPD5Q8WTR4 605 aa18.67■□□□□ 0.58
MSLN-207ENST00000566549 KCNA7Q96RP8 456 aa18.67■□□□□ 0.58
MSLN-207ENST00000566549 MID1IP1Q9NPA3 183 aa18.67■□□□□ 0.58
MSLN-207ENST00000566549 PRPF19Q9UMS4 504 aaKnown RBP18.67■□□□□ 0.58
MSLN-207ENST00000566549 MED16Q9Y2X0 877 aa18.67■□□□□ 0.58
MSLN-207ENST00000566549 BACE2Q9Y5Z0 518 aa18.67■□□□□ 0.58
MSLN-207ENST00000566549 SUPT3HB4E1H0 165 aa18.66■□□□□ 0.58
MSLN-207ENST00000566549 H0Y626 953 aa18.66■□□□□ 0.58
MSLN-207ENST00000566549 H3BNX3 289 aa18.66■□□□□ 0.58
MSLN-207ENST00000566549 SUPT3HO75486 399 aa18.66■□□□□ 0.58
MSLN-207ENST00000566549 TMCC1O94876 653 aa18.66■□□□□ 0.58
MSLN-207ENST00000566549 UBTFL6P0CB48 400 aaPredicted RBP18.66■□□□□ 0.58
MSLN-207ENST00000566549 MBL2P11226 248 aaPredicted RBP18.66■□□□□ 0.58
MSLN-207ENST00000566549 FOXA1P55317 472 aa18.66■□□□□ 0.58
MSLN-207ENST00000566549 MS4A2Q01362 244 aa18.66■□□□□ 0.58
MSLN-207ENST00000566549 SATB1Q01826 763 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms