RNA–Protein interactions for RNA: ENST00000566385.2

LINC00562-201, long intergenic non-protein coding RNA 562, humanhuman

BASIC

Gene LINC00562, Length 2,470 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00562-201ENST00000566385 ZMYM5Q9UJ78 669 aa11.34□□□□□ -0.59
LINC00562-201ENST00000566385 MED16Q9Y2X0 877 aa11.34□□□□□ -0.59
LINC00562-201ENST00000566385 VCANP13611 3396 aa11.34□□□□□ -0.59
LINC00562-201ENST00000566385 KIF26AQ9ULI4 1882 aaPredicted RBP11.34□□□□□ -0.59
LINC00562-201ENST00000566385 SCN8AQ9UQD0 1980 aa11.33□□□□□ -0.6
LINC00562-201ENST00000566385 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.33□□□□□ -0.6
LINC00562-201ENST00000566385 UBA6A0AVT1 1052 aaPredicted RBP11.33□□□□□ -0.6
LINC00562-201ENST00000566385 TARM1B6A8C7 271 aa11.33□□□□□ -0.6
LINC00562-201ENST00000566385 GAPDHSO14556 408 aaPredicted RBP11.33□□□□□ -0.6
LINC00562-201ENST00000566385 SNNO75324 88 aaPredicted RBP11.33□□□□□ -0.6
LINC00562-201ENST00000566385 GSTA1P08263 222 aa11.33□□□□□ -0.6
LINC00562-201ENST00000566385 POLR2EP19388 210 aaKnown RBP11.33□□□□□ -0.6
LINC00562-201ENST00000566385 PSMA3P25788 255 aa11.33□□□□□ -0.6
LINC00562-201ENST00000566385 PMLP29590 882 aa11.33□□□□□ -0.6
LINC00562-201ENST00000566385 SERPINA4P29622 427 aa11.33□□□□□ -0.6
LINC00562-201ENST00000566385 DGKGP49619 791 aa11.33□□□□□ -0.6
LINC00562-201ENST00000566385 LAMB3Q13751 1172 aa11.33□□□□□ -0.6
LINC00562-201ENST00000566385 TYSND1Q2T9J0 566 aa11.33□□□□□ -0.6
LINC00562-201ENST00000566385 CCDC153Q494R4 210 aa11.33□□□□□ -0.6
LINC00562-201ENST00000566385 TAF1BQ53T94 588 aaPredicted RBP11.33□□□□□ -0.6
LINC00562-201ENST00000566385 CARD16Q5EG05 197 aa11.33□□□□□ -0.6
LINC00562-201ENST00000566385 RNF187Q5TA31 235 aaPredicted RBP11.33□□□□□ -0.6
LINC00562-201ENST00000566385 AHI1Q8N157 1196 aa11.33□□□□□ -0.6
LINC00562-201ENST00000566385 FRS2Q8WU20 508 aa11.33□□□□□ -0.6
LINC00562-201ENST00000566385 C10orf82Q8WW14 230 aa11.33□□□□□ -0.6
LINC00562-201ENST00000566385 NXPE3Q969Y0 559 aa11.33□□□□□ -0.6
LINC00562-201ENST00000566385 ISG20Q96AZ6 181 aaKnown RBP11.33□□□□□ -0.6
LINC00562-201ENST00000566385 SGF29Q96ES7 293 aa11.33□□□□□ -0.6
LINC00562-201ENST00000566385 PLA2G2FQ9BZM2 168 aa11.33□□□□□ -0.6
LINC00562-201ENST00000566385 SUV39H2Q9H5I1 410 aa11.33□□□□□ -0.6
LINC00562-201ENST00000566385 ZFYVE1Q9HBF4 777 aa11.33□□□□□ -0.6
LINC00562-201ENST00000566385 GPAMQ9HCL2 828 aa11.33□□□□□ -0.6
LINC00562-201ENST00000566385 ZDHHC4Q9NPG8 344 aa11.33□□□□□ -0.6
LINC00562-201ENST00000566385 GALPQ9UBC7 116 aa11.33□□□□□ -0.6
LINC00562-201ENST00000566385 XPR1Q9UBH6 696 aa11.33□□□□□ -0.6
LINC00562-201ENST00000566385 ARL2BPQ9Y2Y0 163 aa11.33□□□□□ -0.6
LINC00562-201ENST00000566385 A0A0G2JND7 137 aa11.33□□□□□ -0.6
LINC00562-201ENST00000566385 SLC9A3R1O14745 358 aaPredicted RBP11.33□□□□□ -0.6
LINC00562-201ENST00000566385 CCDC166P0CW27 439 aa11.33□□□□□ -0.6
LINC00562-201ENST00000566385 FMO4P31512 558 aa11.33□□□□□ -0.6
LINC00562-201ENST00000566385 CCR10P46092 362 aa11.33□□□□□ -0.6
LINC00562-201ENST00000566385 CLCN5P51795 746 aa11.33□□□□□ -0.6
LINC00562-201ENST00000566385 SLC12A2P55011 1212 aa11.33□□□□□ -0.6
LINC00562-201ENST00000566385 STX3Q13277 289 aa11.33□□□□□ -0.6
LINC00562-201ENST00000566385 POM121L1PQ3SYA9 428 aa11.33□□□□□ -0.6
LINC00562-201ENST00000566385 HSF5Q4G112 596 aaPredicted RBP11.33□□□□□ -0.6
LINC00562-201ENST00000566385 SETMARQ53H47 684 aaPredicted RBP11.33□□□□□ -0.6
LINC00562-201ENST00000566385 ZRANB3Q5FWF4 1079 aa11.33□□□□□ -0.6
LINC00562-201ENST00000566385 VITQ6UXI7 678 aa11.33□□□□□ -0.6
LINC00562-201ENST00000566385 RFLNAQ6ZTI6 216 aa11.33□□□□□ -0.6
LINC00562-201ENST00000566385 GALNT7Q86SF2 657 aa11.33□□□□□ -0.6
LINC00562-201ENST00000566385 ETFBKMTQ8IXQ9 262 aa11.33□□□□□ -0.6
LINC00562-201ENST00000566385 GRAMD1AQ96CP6 724 aa11.33□□□□□ -0.6
LINC00562-201ENST00000566385 ECHDC3Q96DC8 303 aa11.33□□□□□ -0.6
LINC00562-201ENST00000566385 ERLEC1Q96DZ1 483 aa11.33□□□□□ -0.6
LINC00562-201ENST00000566385 FAM83CQ9BQN1 747 aa11.33□□□□□ -0.6
LINC00562-201ENST00000566385 IGSF5Q9NSI5 407 aa11.33□□□□□ -0.6
LINC00562-201ENST00000566385 GTSE1Q9NYZ3 720 aa11.33□□□□□ -0.6
LINC00562-201ENST00000566385 FAM50BQ9Y247 325 aa11.33□□□□□ -0.6
LINC00562-201ENST00000566385 NEMP2A6NFY4 417 aa11.32□□□□□ -0.6
LINC00562-201ENST00000566385 CCT8L1PA6NM43 557 aa11.32□□□□□ -0.6
LINC00562-201ENST00000566385 SOCS5O75159 536 aa11.32□□□□□ -0.6
LINC00562-201ENST00000566385 KLHL2O95198 593 aa11.32□□□□□ -0.6
LINC00562-201ENST00000566385 CTSLP07711 333 aa11.32□□□□□ -0.6
LINC00562-201ENST00000566385 DLDP09622 509 aaKnown RBP11.32□□□□□ -0.6
LINC00562-201ENST00000566385 RALBP11234 206 aa11.32□□□□□ -0.6
LINC00562-201ENST00000566385 LHCGRP22888 699 aa11.32□□□□□ -0.6
LINC00562-201ENST00000566385 KCNC1P48547 511 aa11.32□□□□□ -0.6
LINC00562-201ENST00000566385 LRRC8EQ6NSJ5 796 aa11.32□□□□□ -0.6
LINC00562-201ENST00000566385 AFTPHQ6ULP2 937 aa11.32□□□□□ -0.6
LINC00562-201ENST00000566385 FAM151BQ6UXP7 276 aa11.32□□□□□ -0.6
LINC00562-201ENST00000566385 TRPM8Q7Z2W7 1104 aa11.32□□□□□ -0.6
LINC00562-201ENST00000566385 METTL3Q86U44 580 aaKnown RBP11.32□□□□□ -0.6
LINC00562-201ENST00000566385 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.32□□□□□ -0.6
LINC00562-201ENST00000566385 OR6Y1Q8NGX8 325 aa11.32□□□□□ -0.6
LINC00562-201ENST00000566385 LPGAT1Q92604 370 aa11.32□□□□□ -0.6
LINC00562-201ENST00000566385 TIFAQ96CG3 184 aa11.32□□□□□ -0.6
LINC00562-201ENST00000566385 SCYL1Q96KG9 808 aa11.32□□□□□ -0.6
LINC00562-201ENST00000566385 UBXN10Q96LJ8 280 aa11.32□□□□□ -0.6
LINC00562-201ENST00000566385 KLHL32Q96NJ5 620 aa11.32□□□□□ -0.6
LINC00562-201ENST00000566385 BIRC8Q96P09 236 aa11.32□□□□□ -0.6
LINC00562-201ENST00000566385 RPP25Q9BUL9 199 aaKnown RBP11.32□□□□□ -0.6
LINC00562-201ENST00000566385 HPS4Q9NQG7 708 aa11.32□□□□□ -0.6
LINC00562-201ENST00000566385 CLEC1BQ9P126 229 aa11.32□□□□□ -0.6
LINC00562-201ENST00000566385 KLHL14Q9P2G3 628 aa11.32□□□□□ -0.6
LINC00562-201ENST00000566385 WISP3O95389 354 aaPredicted RBP11.32□□□□□ -0.6
LINC00562-201ENST00000566385 OGNP20774 298 aaKnown RBP11.32□□□□□ -0.6
LINC00562-201ENST00000566385 CRABP2P29373 138 aa11.32□□□□□ -0.6
LINC00562-201ENST00000566385 GRM2Q14416 872 aa11.32□□□□□ -0.6
LINC00562-201ENST00000566385 ANKRD54Q6NXT1 300 aa11.32□□□□□ -0.6
LINC00562-201ENST00000566385 CRTC1Q6UUV9 634 aa11.32□□□□□ -0.6
LINC00562-201ENST00000566385 SDCCAG8Q86SQ7 713 aaPredicted RBP11.32□□□□□ -0.6
LINC00562-201ENST00000566385 LMNTD2Q8IXW0 634 aa11.32□□□□□ -0.6
LINC00562-201ENST00000566385 PCDH20Q8N6Y1 951 aaKnown RBP11.32□□□□□ -0.6
LINC00562-201ENST00000566385 PPP1R14CQ8TAE6 165 aa11.32□□□□□ -0.6
LINC00562-201ENST00000566385 MYADMQ96S97 322 aa11.32□□□□□ -0.6
LINC00562-201ENST00000566385 SORT1Q99523 831 aa11.32□□□□□ -0.6
LINC00562-201ENST00000566385 SLC30A3Q99726 388 aa11.32□□□□□ -0.6
LINC00562-201ENST00000566385 HACD3Q9P035 362 aa11.32□□□□□ -0.6
LINC00562-201ENST00000566385 ANKRD6Q9Y2G4 727 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms