RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 ZNF560Q96MR9 790 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 ING2Q9H160 280 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 RASSF1Q9NS23 344 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 COMMD8Q9NX08 183 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 MTMR10Q9NXD2 777 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 ZNF224Q9NZL3 707 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 OPTCQ9UBM4 332 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 PCDHGA7Q9Y5G6 932 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 COL14A1Q05707 1796 aaKnown RBP2.92□□□□□ -1.94
CHD9-218ENST00000566029 MTCL1Q9Y4B5 1905 aaKnown RBP2.92□□□□□ -1.94
CHD9-218ENST00000566029 TCRBV7S3A2A0A539 114 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 AQP12BA6NM10 295 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 TPST1O60507 370 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 SOX30O94993 753 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 EPN2O95208 641 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 RASAL1O95294 804 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 CSF2P04141 144 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 CTRB1P17538 263 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 ADORA2AP29274 412 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 CORO1AP31146 461 aaKnown RBP2.92□□□□□ -1.94
CHD9-218ENST00000566029 CDKN2BP42772 138 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 GDI2P50395 445 aaKnown RBP2.92□□□□□ -1.94
CHD9-218ENST00000566029 PCDH1Q08174 1060 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 PRKG2Q13237 762 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 KIZQ2M2Z5 673 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 DGKKQ5KSL6 1271 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 BROXQ5VW32 411 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 CTRB2Q6GPI1 263 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 ZCCHC23Q6ZST2 131 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 AQP12AQ8IXF9 295 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 CLEC4MQ9H2X3 399 aaPredicted RBP2.92□□□□□ -1.94
CHD9-218ENST00000566029 WDR6Q9NNW5 1121 aaKnown RBP2.92□□□□□ -1.94
CHD9-218ENST00000566029 MRPL22Q9NWU5 206 aaKnown RBP2.92□□□□□ -1.94
CHD9-218ENST00000566029 ABCG2Q9UNQ0 655 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 LAMB4A4D0S4 1761 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 LOC100653049A0A140TA62 436 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 PIPSLA2A3N6 862 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 CYB561D2O14569 222 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 MPZL2O60487 215 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 KRT34O76011 436 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 NR2C1P13056 603 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 TCF4P15884 667 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 SSTR1P30872 391 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 SLC9A3P48764 834 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 RAD51Q06609 339 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 AOC3Q16853 763 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 KCNT2Q6UVM3 1135 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 DHRSXQ8N5I4 330 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 LINC00469Q8N7U9 141 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 PIWIL2Q8TC59 973 aaKnown RBP2.92□□□□□ -1.94
CHD9-218ENST00000566029 FAM216AQ8WUB2 273 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 PPP1R13LQ8WUF5 828 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 SH2D3AQ9BRG2 576 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 UQCC2Q9BRT2 126 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 TARS2Q9BW92 718 aaKnown RBP2.92□□□□□ -1.94
CHD9-218ENST00000566029 UNC93B1Q9H1C4 597 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 NDFIP2Q9NV92 336 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 INTS10Q9NVR2 710 aaKnown RBP2.92□□□□□ -1.94
CHD9-218ENST00000566029 IL37Q9NZH6 218 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 DNMT3LQ9UJW3 386 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 MYH10P35580 1976 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 SNED1Q8TER0 1413 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 GLI3P10071 1580 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 C12orf71A8MTZ7 269 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 DDNO94850 711 aaPredicted RBP2.92□□□□□ -1.94
CHD9-218ENST00000566029 ARAFP10398 606 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 RPS12P25398 132 aaKnown RBP2.92□□□□□ -1.94
CHD9-218ENST00000566029 ARL3P36405 182 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 RPL35P42766 123 aaKnown RBP2.92□□□□□ -1.94
CHD9-218ENST00000566029 AP2S1P53680 142 aaPredicted RBP2.92□□□□□ -1.94
CHD9-218ENST00000566029 EIF6P56537 245 aaKnown RBP2.92□□□□□ -1.94
CHD9-218ENST00000566029 PSMC5P62195 406 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 PCLAFQ15004 111 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 CDK10Q15131 360 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 PON2Q15165 354 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 ATP13A5Q4VNC0 1218 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 MOXD1Q6UVY6 613 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 LINC00518Q8N0U6 118 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 TEX29Q8N6K0 151 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 ANKRD53Q8N9V6 530 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 PIK3C3Q8NEB9 887 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 TMEM174Q8WUU8 243 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 SEMA4DQ92854 862 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 DYNLL2Q96FJ2 89 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 PDXPQ96GD0 296 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 ASB2Q96Q27 587 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 MECRQ9BV79 373 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 PRRG3Q9BZD7 231 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 B3GNT2Q9NY97 397 aa2.92□□□□□ -1.94
CHD9-218ENST00000566029 TSR3Q9UJK0 312 aaKnown RBP2.92□□□□□ -1.94
CHD9-218ENST00000566029 ISPDA4D126 451 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 CFLARO15519 480 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 LYPLA2O95372 231 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 NDST3O95803 873 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 ITGAVP06756 1048 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 ZNF806P0C7X5 589 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 RBL1P28749 1068 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 GCLMP48507 274 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 INCA1Q0VD86 236 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 IKZF1Q13422 519 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms