RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 PDHA1P08559 390 aa8.57□□□□□ -1.04
CAPN3-213ENST00000565173 JMJD7P0C870 316 aa8.57□□□□□ -1.04
CAPN3-213ENST00000565173 MYBL1P10243 752 aa8.57□□□□□ -1.04
CAPN3-213ENST00000565173 WT1P19544 449 aaPredicted RBP8.57□□□□□ -1.04
CAPN3-213ENST00000565173 AK4P27144 223 aaPredicted RBP8.57□□□□□ -1.04
CAPN3-213ENST00000565173 TEAD1P28347 426 aa8.57□□□□□ -1.04
CAPN3-213ENST00000565173 CD1CP29017 333 aa8.57□□□□□ -1.04
CAPN3-213ENST00000565173 HSPA9P38646 679 aaKnown RBP8.57□□□□□ -1.04
CAPN3-213ENST00000565173 GNPDA1P46926 289 aa8.57□□□□□ -1.04
CAPN3-213ENST00000565173 ARSDP51689 593 aa8.57□□□□□ -1.04
CAPN3-213ENST00000565173 MAZP56270 477 aaKnown RBP8.57□□□□□ -1.04
CAPN3-213ENST00000565173 MAXP61244 160 aa8.57□□□□□ -1.04
CAPN3-213ENST00000565173 SLC25A11Q02978 314 aaKnown RBP8.57□□□□□ -1.04
CAPN3-213ENST00000565173 DPTQ07507 201 aa8.57□□□□□ -1.04
CAPN3-213ENST00000565173 KLHL30Q0D2K2 578 aa8.57□□□□□ -1.04
CAPN3-213ENST00000565173 ARHGEF7Q14155 803 aa8.57□□□□□ -1.04
CAPN3-213ENST00000565173 ZNF235Q14590 738 aa8.57□□□□□ -1.04
CAPN3-213ENST00000565173 NR1I3Q14994 352 aa8.57□□□□□ -1.04
CAPN3-213ENST00000565173 C16orf72Q14CZ0 275 aa8.57□□□□□ -1.04
CAPN3-213ENST00000565173 TSR1Q2NL82 804 aaKnown RBP8.57□□□□□ -1.04
CAPN3-213ENST00000565173 RALGPS1Q5JS13 557 aa8.57□□□□□ -1.04
CAPN3-213ENST00000565173 HGSNATQ68CP4 663 aa8.57□□□□□ -1.04
CAPN3-213ENST00000565173 TMCO3Q6UWJ1 677 aa8.57□□□□□ -1.04
CAPN3-213ENST00000565173 TSPAN33Q86UF1 283 aa8.57□□□□□ -1.04
CAPN3-213ENST00000565173 PIM3Q86V86 326 aa8.57□□□□□ -1.04
CAPN3-213ENST00000565173 ZFAND4Q86XD8 727 aa8.57□□□□□ -1.04
CAPN3-213ENST00000565173 JAMLQ86YT9 394 aa8.57□□□□□ -1.04
CAPN3-213ENST00000565173 NAGSQ8N159 534 aa8.57□□□□□ -1.04
CAPN3-213ENST00000565173 FAM71BQ8TC56 605 aa8.57□□□□□ -1.04
CAPN3-213ENST00000565173 KIAA1524Q8TCG1 905 aa8.57□□□□□ -1.04
CAPN3-213ENST00000565173 ZDHHC1Q8WTX9 485 aa8.57□□□□□ -1.04
CAPN3-213ENST00000565173 PDCD6IPQ8WUM4 868 aaKnown RBP8.57□□□□□ -1.04
CAPN3-213ENST00000565173 PIH1D2Q8WWB5 315 aa8.57□□□□□ -1.04
CAPN3-213ENST00000565173 HSPH1Q92598 858 aa8.57□□□□□ -1.04
CAPN3-213ENST00000565173 USP7Q93009 1102 aa8.57□□□□□ -1.04
CAPN3-213ENST00000565173 SCARF2Q96GP6 870 aaPredicted RBP8.57□□□□□ -1.04
CAPN3-213ENST00000565173 SMIM14Q96QK8 99 aa8.57□□□□□ -1.04
CAPN3-213ENST00000565173 MCCC1Q96RQ3 725 aaPredicted RBP8.57□□□□□ -1.04
CAPN3-213ENST00000565173 CMKLR1Q99788 373 aa8.57□□□□□ -1.04
CAPN3-213ENST00000565173 RDH14Q9HBH5 336 aa8.57□□□□□ -1.04
CAPN3-213ENST00000565173 PCDH18Q9HCL0 1135 aa8.57□□□□□ -1.04
CAPN3-213ENST00000565173 MRPL47Q9HD33 250 aaKnown RBP8.57□□□□□ -1.04
CAPN3-213ENST00000565173 PHPT1Q9NRX4 125 aaPredicted RBP8.57□□□□□ -1.04
CAPN3-213ENST00000565173 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.57□□□□□ -1.04
CAPN3-213ENST00000565173 KCTD5Q9NXV2 234 aa8.57□□□□□ -1.04
CAPN3-213ENST00000565173 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.57□□□□□ -1.04
CAPN3-213ENST00000565173 FOXJ2Q9P0K8 574 aa8.57□□□□□ -1.04
CAPN3-213ENST00000565173 TAAR2Q9P1P5 351 aa8.57□□□□□ -1.04
CAPN3-213ENST00000565173 MOSPD1Q9UJG1 213 aa8.57□□□□□ -1.04
CAPN3-213ENST00000565173 SCINQ9Y6U3 715 aa8.57□□□□□ -1.04
CAPN3-213ENST00000565173 SPENQ96T58 3664 aaKnown RBP8.57□□□□□ -1.04
CAPN3-213ENST00000565173 ARHGEF17Q96PE2 2063 aaPredicted RBP8.57□□□□□ -1.04
CAPN3-213ENST00000565173 RELNP78509 3460 aa8.56□□□□□ -1.04
CAPN3-213ENST00000565173 IGHV5-10-1A0A0J9YXX1 117 aa8.56□□□□□ -1.04
CAPN3-213ENST00000565173 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.56□□□□□ -1.04
CAPN3-213ENST00000565173 PSMD11O00231 422 aa8.56□□□□□ -1.04
CAPN3-213ENST00000565173 PPM1DO15297 605 aa8.56□□□□□ -1.04
CAPN3-213ENST00000565173 CPP00450 1065 aa8.56□□□□□ -1.04
CAPN3-213ENST00000565173 IVLP07476 585 aa8.56□□□□□ -1.04
CAPN3-213ENST00000565173 LIPCP11150 499 aa8.56□□□□□ -1.04
CAPN3-213ENST00000565173 CCL4P13236 92 aa8.56□□□□□ -1.04
CAPN3-213ENST00000565173 ALDH4A1P30038 563 aa8.56□□□□□ -1.04
CAPN3-213ENST00000565173 ADCY8P40145 1251 aa8.56□□□□□ -1.04
CAPN3-213ENST00000565173 ARL4AP40617 200 aa8.56□□□□□ -1.04
CAPN3-213ENST00000565173 MMP13P45452 471 aa8.56□□□□□ -1.04
CAPN3-213ENST00000565173 GPR3P46089 330 aa8.56□□□□□ -1.04
CAPN3-213ENST00000565173 ARSEP51690 589 aa8.56□□□□□ -1.04
CAPN3-213ENST00000565173 CDH6P55285 790 aa8.56□□□□□ -1.04
CAPN3-213ENST00000565173 CTBSQ01459 385 aa8.56□□□□□ -1.04
CAPN3-213ENST00000565173 PTSQ03393 145 aa8.56□□□□□ -1.04
CAPN3-213ENST00000565173 MMRN1Q13201 1228 aa8.56□□□□□ -1.04
CAPN3-213ENST00000565173 SQSTM1Q13501 440 aa8.56□□□□□ -1.04
CAPN3-213ENST00000565173 PIGHQ14442 188 aaPredicted RBP8.56□□□□□ -1.04
CAPN3-213ENST00000565173 AMZ1Q400G9 498 aa8.56□□□□□ -1.04
CAPN3-213ENST00000565173 ARMC12Q5T9G4 340 aa8.56□□□□□ -1.04
CAPN3-213ENST00000565173 MARC1Q5VT66 337 aa8.56□□□□□ -1.04
CAPN3-213ENST00000565173 DENND2CQ68D51 928 aa8.56□□□□□ -1.04
CAPN3-213ENST00000565173 USP53Q70EK8 1073 aa8.56□□□□□ -1.04
CAPN3-213ENST00000565173 NLRP8Q86W28 1048 aa8.56□□□□□ -1.04
CAPN3-213ENST00000565173 NIPA2Q8N8Q9 360 aa8.56□□□□□ -1.04
CAPN3-213ENST00000565173 TEKT4Q8WW24 435 aa8.56□□□□□ -1.04
CAPN3-213ENST00000565173 PATE1Q8WXA2 126 aa8.56□□□□□ -1.04
CAPN3-213ENST00000565173 SGF29Q96ES7 293 aa8.56□□□□□ -1.04
CAPN3-213ENST00000565173 BTBD6Q96KE9 485 aa8.56□□□□□ -1.04
CAPN3-213ENST00000565173 NUDT22Q9BRQ3 303 aa8.56□□□□□ -1.04
CAPN3-213ENST00000565173 GSDMCQ9BYG8 508 aa8.56□□□□□ -1.04
CAPN3-213ENST00000565173 B3GNT4Q9C0J1 378 aa8.56□□□□□ -1.04
CAPN3-213ENST00000565173 NAT10Q9H0A0 1025 aaKnown RBP8.56□□□□□ -1.04
CAPN3-213ENST00000565173 PLEKHM1Q9Y4G2 1056 aa8.56□□□□□ -1.04
CAPN3-213ENST00000565173 RHPN2P1A8MT19 583 aa8.55□□□□□ -1.04
CAPN3-213ENST00000565173 PYCARD-AS1I3L0S3 204 aa8.55□□□□□ -1.04
CAPN3-213ENST00000565173 MBD3O95983 291 aa8.55□□□□□ -1.04
CAPN3-213ENST00000565173 PRLP01236 227 aa8.55□□□□□ -1.04
CAPN3-213ENST00000565173 ITGB2P05107 769 aa8.55□□□□□ -1.04
CAPN3-213ENST00000565173 CYP1A2P05177 515 aa8.55□□□□□ -1.04
CAPN3-213ENST00000565173 CD48P09326 243 aa8.55□□□□□ -1.04
CAPN3-213ENST00000565173 FGF3P11487 239 aaPredicted RBP8.55□□□□□ -1.04
CAPN3-213ENST00000565173 CYP2A6P11509 494 aaPredicted RBP8.55□□□□□ -1.04
CAPN3-213ENST00000565173 CTPS1P17812 591 aa8.55□□□□□ -1.04
CAPN3-213ENST00000565173 ITGB6P18564 788 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms